Chrysemys picta (western painted turtle): 101945148
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Entry
101945148 CDS
T04662
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpic01001
]
101945148 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpic04054
]
101945148 (CIITA)
Enzymes [BR:
cpic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101945148 (CIITA)
Protein kinases [BR:
cpic01001
]
Serine/threonine kinases: Other
TAF1 family
101945148 (CIITA)
Pattern recognition receptors [BR:
cpic04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101945148 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_4
LRR_6
LRR_14
NB-ARC
LRR_9
LRR_8
NPHP3_N
CARD
nSTAND_NTPase5
AAA_16
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
101945148
NCBI-ProteinID:
XP_005306817
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
MNLFKEILPGVREILSSATTSDVHALLSCMLEKDVISKEYHQTLLQEKDREDLARKISLT
LVEKWDLCLNTLVPLRCLKLYTKMPQDITDNESSLNRGIAASKRQTMDSAVLTENSFLDL
LHSNIDPLHLYSLLDTRLSDEDEESELSTDPEIDTINHDQFSNLDVFYTMESNESVEESL
FSNTGEAYSRIAGLAEYVLKDQQERQMEDIFGKLILDEMSNETTEGFTEMKKQKCQKRSF
VSPAESYSDASKPKSRRTDAATRVKERVCTEGSRAVGDVRASCQKRVESPGSTVNGSFVA
VPLNSSPANSTSLSHLHMQFSVTSIHPTGKNVVMPVSSGNSNPDCLLVGAKGIQVISSFA
VLPQQIINLPVGNGASNIIIYPVSSSPTETLQISPVFPTTLAAQVDLAVQSILGPPDKNT
SIGPFAYMPETAAVTDLTDEEEMSNEISQIPVVPSEQILKRPKPVEAFCTSLKDYFQDVC
KFMAMDREVTLDHFYIDGALMQGQTETKSGKNVIKVMEKELVIYNLEEKEKAAIERSQIF
QVLGGKELETKIIVVLGKAGMGKSILVQKICQDWSNGKFSQFEFVFWFECRRLSLPEKQY
SLKDLLLELFVKPREGSDKVFEYILQNPNKVLLIFDGFEELQDHDGFTHYSDCQSYKELY
SIRELFAGLFQKKILSGCTLLLTARPKDKFNQYLSKVDKIIEMIGFSPQQVELYIARYFE
GLPYSDDAVKLITDCQYLFSHCYSPVMCRFICFLCEMMFEMGDKDLPPTLTSLFVKYLQQ
KLTPTQTDATAVGNQQHITRLAQLAWCLGEKNQNALKSSLFPSKEVKEFALKYGLVLPFT
FPKHSGNGEEEFGSAFSDFVIQNFLSALHLLLAEDIKDKSLTKYLSLPARKKKPHNWLDL
VPRFLPGLLYLQHDPYLCSLSDEHVMKIITKKQKTLLKYIKKIQISDLYPEKLLELLHCV
YETQDSYLLQHVALRLKAELSFLGTLLTPPDVYVLHFILKRSPKEFSLDLRNSGINLQGL
KHLVGLKNVTSFRASLSDTVRLWESLEQTKEYELLKISVEKFDIDPFKAETMKDIRDLSD
LVRIQEKMVHCMEEAFGCNINEIPAIKNLRKLEFALGPACGLQGFLKLVEILAAFPSLQH
LDLDALSENEIGDVGTKSLCEVLSALTSLETLNLSQNKITDLGAEQLATALPSLSSLKTL
SLYNNYICDAGAENIAKILPAMASLRVLHVQCNKITDAGAQKLTDSLRKCPHIKSVAMWN
PTIPYGVLEHLQQLDSRISLL
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaaagagatccttcctggagtcagggaaattctctccagtgccacaact
tctgatgtccatgcattgctcagttgcatgttggagaaagatgttatatccaaggaatac
catcagaccttactccaggaaaaagacagagaagacctagcaaggaagatatctctaaca
cttgtggaaaaatgggacttgtgtttgaacaccttagttcctctccgttgtttaaaactg
tacactaagatgccacaagacatcacagataatgagtcatctctgaacaggggtatagct
gctagcaaaagacaaaccatggattcagcagttttgactgaaaatagctttcttgatttg
ctgcacagcaatattgatccattgcatctatacagcctcttggatacaaggttatctgat
gaagatgaagaaagtgaactttcaacagaccctgaaattgataccatcaaccatgatcag
ttcagcaatttggatgtcttttatacaatggaaagcaatgaaagtgtggaagaatctctc
ttttcaaatacaggggaagcttattctagaatagctggattagcagaatatgtgctcaaa
gatcagcaggagagacagatggaagacatttttggaaaactcattttggatgaaatgtcc
aatgaaactacagagggttttacagagatgaagaagcaaaaatgtcagaaacgatcattt
gtgagccctgcagagagttactctgatgcttccaagcccaaaagcaggagaacggatgca
gcaacgagggtaaaggaacgagtatgtactgaaggcagcagagctgttggggatgtaaga
gctagttgccagaaaagagtggagtcccccgggtctacagtgaatggcagttttgtagcg
gtgcctctgaacagctctccagctaactccacctctttgtctcacctgcacatgcagttt
tctgttaccagtatacatccgactggaaaaaatgttgtgatgcccgtgtcttctggaaat
tccaaccccgactgtctgcttgttggtgctaaagggatccaagtgatatccagctttgca
gttcttcctcagcagataattaatttgcctgtagggaatggtgcatccaatattataata
tatccagtgtcctcctcccccactgaaacattacagatatcaccagttttccccacaact
ctggctgctcaagtggacttggctgtccaaagcattttggggcctcctgacaaaaacacc
tccattggcccatttgcttatatgccagagactgcagctgtgactgatcttacagatgaa
gaagaaatgtccaatgagatatcacaaattcctgttgttccttctgaacaaattctcaaa
agaccaaagccagtggaagctttctgcacatcacttaaggattatttccaagatgtgtgc
aagttcatggccatggaccgtgaagtaacccttgatcacttttacattgatggggctctc
atgcaaggtcaaactgaaacaaagagtgggaaaaatgtcatcaaggtgatggagaaggag
ctggtaatatacaatttagaagagaaggaaaaagcagctatagaaagaagccaaatattt
caagtcctaggagggaaagaactagagaccaaaatcattgtggtgttgggaaaggcagga
atgggtaaaagcattcttgttcaaaagatctgccaagactggtccaatggaaagttttct
cagtttgaatttgtcttttggtttgagtgtagacgactgagcctgcctgagaagcaatac
agcttgaaggacctgcttcttgagctgtttgtcaaacctcgagagggaagcgacaaagtc
ttcgagtacatactgcaaaatcccaataaagtcctcctcatcttcgatggttttgaagag
ttgcaggatcatgatggctttacacattactcagactgccagtcttacaaggagctgtac
agcatcagggagctatttgcagggctgttccagaagaagatactcagtggctgtacttta
ttgctaacagcaagacccaaggacaaatttaatcagtatttatccaaagtggacaagatt
attgaaatgatagggttctctccacagcaggtagaattatacatagccagatattttgaa
gggctaccatacagtgatgacgcagtgaaattaatcacagattgtcaatatctgttcagt
cactgctacagccctgtcatgtgtagattcatttgttttctctgtgaaatgatgtttgaa
atgggagacaaagacctgcctccaacacttaccagcctctttgtaaaataccttcagcaa
aagctgacacccacacaaacagatgcgacagccgtaggaaatcaacagcacattaccaga
ctagctcagctagcctggtgtcttggagaaaagaatcaaaatgccctgaagagcagtctt
tttccctctaaagaagttaaggagtttgctctgaaatatggcttagtactgccatttaca
ttcccaaaacattcgggaaatggggaggaagaatttgggagtgcgttctcagacttcgtt
atccaaaattttttgagtgcacttcatctgttgctcgcagaagacatcaaggataaaagc
ctcacaaagtatctttccctaccagccaggaagaaaaagcctcataattggttagatctg
gtgcctcgattcttgcctgggttattgtacctccagcatgatccgtacctctgctctctt
tcagatgagcatgtaatgaaaatcataaccaagaagcagaaaacgctcttaaaatatatt
aaaaaaatacagataagtgatctctatccagaaaaactgcttgagctgctccactgtgtt
tatgaaacacaggacagctatcttttgcagcatgtggctttaaggctgaaggctgaactt
tcttttctgggcactcttcttacaccccctgatgtctatgtgctgcattttattttaaaa
agatccccaaaggagttttccttggatttgcggaacagcggcattaacctacaagggctg
aaacacctggttggactaaagaatgtgacatcattcagggcctcccttagtgatacagtc
aggctgtgggagtccttagagcaaacaaaggaatatgagctgctgaagatttcagttgag
aaatttgatattgatccctttaaggcagaaactatgaaggacatccgtgacctttctgac
cttgtacggatacaagagaaaatggtccactgcatggaagaggcatttggctgcaatatt
aatgaaattcctgctatcaaaaacctcagaaaactagaatttgcgctgggtccagcctgc
ggccttcagggattcttaaagcttgttgaaattcttgcagcgtttccatctcttcagcac
ttagacttggatgctctgagtgaaaatgaaataggagacgtaggaacaaaaagtctctgt
gaagtattgtcggcgctgacttcactggaaacgttgaacttatcacagaacaagataaca
gatttgggtgcagagcaactagctactgctcttccttccttatcctcattaaagacactt
agtttgtacaataactacatttgtgatgctggagcggaaaatattgcaaaaatacttcct
gcaatggcatctttaagggtgctacatgttcagtgtaacaagataactgatgccggagcc
cagaagctgactgatagcctcagaaaatgcccccacatcaagagtgtggcgatgtggaac
cctactattccctatggagttcttgagcaccttcaacagctagattctaggatcagtttg
ctgtag
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integrated database retrieval system
