Chrysemys picta (western painted turtle): 101945329
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Entry
101945329 CDS
T04662
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpic04990
]
101945329 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
cpic04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101945329 (SNX13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
BLOC1_2
DUF6395
Motif
Other DBs
NCBI-GeneID:
101945329
NCBI-ProteinID:
XP_042712396
LinkDB
All DBs
Position
2:1633663..1791486
Genome browser
AA seq
1037 aa
AA seq
DB search
MLAEYEDGHLKLLYGHLVAYSPFGNARVWNSHRNMDTSLSIWGWGSLGVVLFLVTFGPFA
IFYFAFYILCFVGGGFVVTLLFGKTNSEKYLEQCEHSFLPPTSVGIFKCTEEMKCEARPI
KIDRRLTGANIIDEPLQQVIQFSLRDYVQYWYYTLSDDESFLLEIRQALQNALIQFSTRS
KEMDWQPYFTTRLVDDFATHLRVFRKAQQRITEKDDQMKGTAEDLVDTFFKVEVEMEKEV
CRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGDFQNKIMRYFVREILARGILLPLINQLSD
PDYINQYVIWMIRDSNCNYEAFMNVIKLSDNVGELEAVRDKAGEELQYLRSLDTAGDDIN
TIKNQINSLLYVVKVCDSRIQRLQSGKEIDTVKLAANFGKLCTVPLDNILVDNVALQFFM
DYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVLLSRQRDGKHQTNQTKGLLRAAAVGIYEQ
YLSEKASPRVNIDDSLVAKLAETLNHEEPTPEIFDDIQRKVYDLMLRDERFYPSFKQNAL
YVRMLAELDMLKDPSFRGSDDGEGESFNGSPTSSINLSLDDLSNVSSDESAQLHAYISDT
VYADYNPYAVAGVCNDHGKTYALYAITVHRRNPTSEERWKTYRRYSDFHDFHMRITEQFE
NLASILKLPGKKTFNNMDREFLEKRKKDLNAYLQLLLNPEMMKASPALAHCVYDFLENKA
YSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTKMSDNMGKMSERLGQDIK
QSFFKVPPLMQKTDSDPEHCRVAAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNI
KNLLQQLIRATYGDTINRKIVDHVDSMTSPEQVADAVKRFRDAFWPNGILAETVPRRNKD
IRMRTRVAGKTKLLEIMPDELKHIIGAETTRKGILRVFEMFQHTQLNKRMVYVFLEGFLE
TLFPQYKFHELFSKLHSRSEQMQRYKQRLQSTQAPSLQKRSTYCKLSPFPYDFQEGKDST
CGRFLPHSPIYVYFTRF
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgttagcagagtatgaagatggccatctcaaactgctgtatgggcacctagttgcctac
tctccctttggaaatgcaagagtatggaacagtcacagaaacatggacaccagtctttcc
atatggggatggggaagccttggtgttgtgctctttctagtaacttttggaccctttgct
atattttactttgcgttttatatcctctgctttgtgggtgggggttttgtggttactctc
ttatttggaaaaacaaattcagaaaagtaccttgaacagtgtgaacactcatttcttcct
cctacatctgttgggatttttaagtgtacagaagaaatgaaatgtgaagccaggcctatt
aagattgacagaagattgacaggtgccaatataattgatgaacctttgcaacaagtaatc
cagttttcactgagggattatgtccagtactggtattatacactaagtgatgatgagtcc
tttcttcttgaaatcaggcaggctcttcaaaatgcacttattcagttttctacaaggtca
aaagaaatggactggcagccttatttcaccacacgacttgttgatgattttgccactcat
cttcgagtattcagaaaagctcaacaaaggataacagaaaaagatgatcaaatgaaaggt
acagcagaagaccttgtagatacattctttaaggttgaagttgaaatggagaaggaagtc
tgtcgtgatctagtctgcacttctcccaaagatgaagaaggattcctaagggatctgtgt
gaggtgttactgtatttattgctacctcctggagacttccagaacaagatcatgcgatac
tttgtcagggaaatcctcgcccgaggaattcttcttccattaataaaccagctcagtgat
cctgattatattaatcagtatgtcatatggatgattcgtgattccaattgtaactatgag
gccttcatgaatgttattaaattaagtgacaatgtaggggagctggaagcagtaagagat
aaggctggagaagaactgcaatatcttcgatccttagatacagcaggagatgatatcaat
actataaaaaatcaaataaacagcttattatatgttgttaaagtatgtgattcaagaata
cagaggttgcagtcaggaaaagaaatagatactgtgaaactggcagcaaactttggaaaa
ctttgcacagtccctctggacaacattctggtagacaacgttgcactacaattttttatg
gattacatgcagcagactggaggccaagcacatctcttcttctggatgacagtggaaggg
tacagggttacagcacagcaacagctggaggtattactaagccggcagagagatggaaaa
catcagactaatcaaaccaaaggcctattaagagcagctgcagttggaatttatgagcag
tacttatcagagaaggcatctccaagagttaatattgatgactccttggtagcaaaactg
gcagaaacattgaaccacgaggaaccaacacctgaaatcttcgatgacattcagagaaag
gtgtatgacttgatgctgcgggatgaaagattttacccttcattcaaacaaaatgctctg
tatgtgcgcatgttagctgaactggatatgctgaaggatcctagtttcagaggatcagat
gatggggaaggcgaatcttttaatgggtcccctacaagcagcataaatttgtccttagat
gacctttcaaatgtctcttctgacgagtcagcacaactacatgcatacatttcagatact
gtctatgctgactataacccatatgctgtggcaggagtatgcaatgaccatggcaagaca
tatgcactgtatgcgatcactgtacatcggagaaatccaactagtgaagagagatggaaa
acgtatcgtcgctacagtgacttccatgacttccacatgaggataactgaacagtttgaa
aacctagcaagtatattgaagcttcctggcaaaaagacatttaacaacatggacagagaa
tttttagagaagaggaaaaaagatttaaatgcatatttgcagttgttgttaaatcctgaa
atgatgaaagcttccccagctttagcccattgtgtgtatgactttctggagaataaagct
tatagcaaaggaaaaggagattttgctcgaaagatggacacatttgtaaatccactgcgt
aactctatgagaaatgtttcaaatgcagtcaagtccctgcctgacagcctggcagagggg
atgactaaaatgtcagacaacatgggcaaaatgtcagaaagattgggacaagacataaag
caatcatttttcaaggtgcctcctttaatgcagaaaactgattccgatcctgaacattgc
cgtgttgccgcacagcttgatgacaatgtggatgacaatatccctcttagagtaatgctg
ctccttatggatgaagtctttgatttaaaggagagaaatcagtggttaagaagaaatata
aaaaatctacttcaacagcttattagagcaacatatggagacacgatcaatagaaaaata
gttgatcatgttgactcgatgacgtctcctgagcaagtagcagatgcagtgaaacgcttc
agagatgccttttggcccaatggcattttagcagaaactgttccacgcagaaacaaagat
attagaatgcgaacgagagtggcagggaaaactaaactactggagataatgccagatgaa
ctgaagcacatcataggtgctgagacaacacggaaaggcattcttcgggtctttgaaatg
tttcagcacactcaactaaataagagaatggtatacgtctttctggagggcttcctggaa
accttatttccacaatataaattccatgagctcttcagcaaactgcattcacggtcagag
caaatgcagagatacaagcagagactacaatctactcaagcgccttctttacagaaaaga
tctacatactgtaaattaagtcctttcccttatgatttccaggaaggcaaagacagcaca
tgtggaagattccttccccatagccccatctatgtatatttcaccaggttctaa
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