Chrysemys picta (western painted turtle): 101945425
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Entry
101945425 CDS
T04662
Symbol
PBRM1
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1
KO
K11757
protein polybromo-1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101945425 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101945425 (PBRM1)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101945425 (PBRM1)
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101945425 (PBRM1)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
101945425 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
101945425
NCBI-ProteinID:
XP_008177415
LinkDB
All DBs
Position
Unknown
AA seq
1711 aa
AA seq
DB search
MRRLAFRGAGCTLKKLDSMGSKRRRATSPSSSISGGDFDDGHHSTNIPGPSRKRRRLSNL
PTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKL
KMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYMRTKNEFVQKGDAEEEE
EEDEGHDNQGAMSEVSSPSYLKEILEQLLEAVAIATNPSGRLISELFQKLPSKVQYPDYY
AIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFN
MKKAEIEHNELAKSSLRIRTPSNLAASKLTGPSSQGKGSVGDERNSTNKYYRNKRSVQGD
RLSAITMALQYGSESDEDAALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRNCRNN
QGQLISEPFFHLPSKKKYPDYYQQIKMPVSLKQIRTKLKNHEYETLDHLECDLNLMFENA
KRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNIK
KQRMKILYNVVLEAREPGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRSEK
YSGEEAMIEDMRLMFRNARHYNEEGSQVYNDAHILEKILKEKKKELGPLPEDDDIASPKL
KLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVT
IKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET
RRDIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPP
LTFDIIRKNVENNRYRRLDLFQEQMFEMLERARRMNRTDSEIYEDAVELQQFFIKIRDEL
CKNGEILLSPALSYTTKHLHNDVEKEXKEKLPKEFEEDKLKREEEKREAEKSEDSAAGAG
LSSLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFY
RPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVC
ESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANTDKVEDEKHTETLEDN
KVGDSILNLEKEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGR
IEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSF
KDFLSCRPTEISENDVLLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQ
KEPSPLLEKKIQQLEAKFAELEGGDEDIEEMAEEEGEIIEAPSMPQLQTPLASELDIMPY
TPPQSTPKSAKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWR
NLEATKKAEYEERAAKVAEQQERERAAQQQQQNSSPRAGTPVGALMGVVPPPTPMGMLNQ
QLTPVAGMIGGYPPVLPPLQGPVDGIVSMSSMQPLHPGVPPPHQLPPGMPGIPGIPPPGV
IGQSVSSMVGTPAPGGSPFGQPMGLLGPPGQQAPPPYPGQSQASQQVIQQPTTPMFVSPP
PKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLSARRRDVHLSKEQESRLPSHWLKSKGA
HTTMADALWRLRDLMLRDTLNIRQAYNIENV
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgaggagattggcttttcgaggtgctggttgtactctgaagaagttggattccatgggt
tccaagcgacgaagggctacttctccttccagcagcatcagtggaggagattttgatgat
ggtcaccattcaacaaatataccaggcccaagccggaaaagaaggagactttcaaatctc
ccaactgtagatcctattgctgtgtgccatgaactgtacaacacaatcagagattacaaa
gatgaacagggcaggctcttatgtgagcttttcattagggcaccaaaacgaagaaatcag
ccagactactatgaagtggtttctcagcctattgatttaatgaaaatccaacagaaacta
aaaatggaggagtatgatgatgtgaacctactgactgctgactttcagctactatttaac
aatgcaaaggcttactataagccagattctcctgaatataaagctgcctgcaaactttgg
gatttgtatatgcgcacaaagaatgagtttgttcagaaaggtgatgctgaggaggaggag
gaagaggatgaagggcatgacaatcaaggggcaatgtctgaagtatcttctccaagctac
ttgaaagagattcttgaacagctgcttgaagctgtagccatagccaccaacccatcagga
cgtctcataagtgagctgtttcagaagcttccctctaaagtgcaatatcctgactattat
gcaataattaaggagcccatagatcttaagactattgcccagaggatacagaatggaagt
tataaaagcattcatgcaatggccaaggatatagatcttttagcaaagaatgccaaaacc
tataatgagcctggatctcaagtattcaaggatgcaaatgctattaaaaaaatatttaat
atgaaaaaagctgaaattgaacataatgaactggccaaatcaagtcttcgaatcaggact
ccatcaaatttggctgcttccaaactgacaggtccttcctcacagggtaaaggcagtgtt
ggtgatgagagaaattctactaacaaatattaccgtaacaaaagatcagtccaaggggat
cgtttatctgcaataaccatggcattgcaatatggatcagaaagtgatgaggatgctgct
ttggctgctgctgcccgttatgaagaaggagagtctgaagcagagagcatcacttccttt
atggatacttctaaccctctttatcagctttatgatacggttagaaactgccgaaataac
cagggtcagcttatatcagaaccctttttccatttgccttccaagaaaaaatatccagat
tattatcagcaaatcaaaatgcctgtttcattgaagcaaatcagaaccaaactgaagaac
catgaatatgaaactctagaccacttggagtgtgatctgaacttaatgtttgaaaatgcc
aaacgctacaatgttcctaattccgccatctataagagagtactgaaaatgcagcaagtt
atgcaggcaaagaagaaagagctagctaggagagacgacattgaggacggagacagtatg
atctcttctgccacatctgatactggaagttcaaaaaggaaaagtaaaaagaatataaag
aagcagcgaatgaaaatcttatataatgttgttcttgaagctcgagagcctggcacaggc
agaagactctgtgatctatttatggttaaaccctccaaaaaggactatccagattattat
aaaatcatcttggagccaatggatttaaaaattattgagcataacatccgcagtgaaaaa
tactcaggggaggaggctatgatagaagatatgaggctaatgttccgaaatgcaaggcac
tataatgaggaaggctcacaggtatataatgatgcccatatcctagagaagattcttaaa
gaaaaaaagaaagagctgggacctcttcctgaagatgatgatatcgcttcccctaaacta
aagctaagtagaaaaagtggtatttcccctaagaaatcaaaatacatgactccaatgcaa
cagaaactgaatgaggtgtatgaagcagtgaagaactacacagataaacgaggcaggcga
ttaagtgccatcttcctgaggcttccatctcgatcagaactccctgactattatgtaacc
attaaaaagccagttgacatggaaaaaataagaagtcacatgatggccaacaagtaccag
gacatcgattccatggtagaagactttgtaatgatgttcaataatgcctgcacttataat
gagccagagtctctgatttacaaagatgcccttgtcctacataaagttttgcttgaaact
agaagagacatagaaggagatgaggattctcatgtccccaatgtaacattgctaatccag
gaacttattcataacctttttgtgtctgtaatgagccatcaggatgatgagggcaggtgt
tatagtgactccttagctgaaattcctgctgttgatcccaacttcccaaacaaaccacct
ttgacttttgatattatccgaaagaatgtagaaaataatcgctacaggagactggacttg
tttcaagagcagatgtttgagatgctagagagggcaaggaggatgaaccggactgattca
gagatttatgaggatgctgtggaacttcagcagttctttattaaaatccgtgatgaactc
tgcaagaatggagagattcttctgtcaccagcactcagctacaccaccaagcatcttcac
aatgatgtagaaaaagaanaaaaggaaaagctacccaaagaattcgaagaggataaactc
aaaagagaggaagagaagagagaagctgaaaagagtgaagattctgctgctggagctggt
ctgtcgagcttacatcggacttacagccaggattgcagctttaagaacagcatgtaccat
gttggggattatgtctatgtggaacctgcagaagctaacctgcaacctcatatagtctgt
attgagcgattatgggaagattcagctggggaaaaatggttgtatggctgctggttttat
cgaccaaatgaaacattccatcttgcaacacgaaaatttctggagaaggaagtttttaag
agtgattactataataaagttccagttagcaaaattttaggcaaatgtgtggtaatgttt
gttaaggagtattttaaattatgtcccgaaaactttagagatgaggatgtctacgtctgt
gagtctcgttactctgcaaagacaaagtcttttaagaagattaaactgtggaccatgcct
attagctctgtaaggtttgtccctcgagatgtgcccctgcctgtggtccgtgttgcttct
gtgtttgctaatacagacaaagtggaagatgagaaacacactgaaaccttagaggataat
aaagtgggagacagtatccttaaccttgaaaaggagaaagaagatgttccagtggaaatg
tcaaatggagaacctggttgccactactttgaacagctccgttataatgatatgtggctt
aaggttggggattgtgtctttataaaatcacatggcttagtgcgacctcgggtgggcaga
attgagaagatgtgggtacgggatggagctgcgtatttctttggcccaatcttcatacac
ccagaagaaactgaacatgaaccaactaaaatgttctacaagaaggaagtgtttttgagt
aacctagaagagacctgtccaatgacctgcattctgggaaaatgtgctgtgttgtcattc
aaggacttcctgtcttgtagaccaacagagatctctgaaaatgatgttctactctgtgag
agccgctacaatgaaagtgacaaacagatgaaaaaatttaaagggcttaagaggttttca
ctctctgcaaaagtagtggatgatgaaatttactactttagaaaacccatagttcctcag
aaggagccatcaccactactggagaaaaagattcagcagctagaagcaaaatttgctgaa
ttggaaggaggtgacgaggatattgaagagatggcggaagaagaaggtgaaatcattgaa
gcaccttctatgcctcagcttcagactccactggctagtgaactggatataatgccatac
actccaccacagtccactccgaagtctgccaagggcagcacgaagaaggagggatcaaaa
aggaagatcaacatgagtgggtatatcctatttagcagtgagatgagagctgtgattaaa
gctcagcacccagactactcctttggagagctcagcaggcttgtaggaactgaatggaga
aacttggaagcaaccaagaaagcagaatatgaagagcgggcagctaaagttgctgagcag
caggagagagagcgagcagcacagcaacagcagcagaattcctccccccgggcaggcact
cctgtcggggctcttatgggggtggtgccgccaccaacaccaatgggaatgctcaatcag
cagttgacacctgttgcaggcatgataggtggctatccgccagtgctgccacctttgcag
ggcccagttgatggcattgttagcatgagcagcatgcagccacttcaccctggggtgccc
ccaccccaccaacttccgccaggtatgccaggcatcccaggcatcccaccaccgggtgtt
ataggccaaagcgtttcttccatggtaggcactccagcaccaggaggaagtccctttgga
cagccaatgggattgcttgggccacctggccagcaggcaccacctccataccctggtcaa
agccaagcaagtcagcaggttatacagcagcccacaactccaatgtttgtctcccctcca
ccaaagacacagaggcttcttcattctgaggcctacctgaaatatattgaggggcttagt
gctgaatcaaatagtattagcaagtgggaccagaccctttcagcacgaagacgtgatgtc
catctatccaaagaacaagagagccgtcttccttcacactggttgaaaagtaaaggggcc
cataccacaatggcagatgccctgtggcgtcttcgagacttgatgctacgagacaccctt
aatatccgtcaagcatacaatatagaaaatgtttaa
DBGET
integrated database retrieval system
