Chrysemys picta (western painted turtle): 101945694
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Entry
101945694 CDS
T04662
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X2
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101945694 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101945694 (PARN)
Enzymes [BR:
cpic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
101945694 (PARN)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101945694 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
T6PP_C
NCBP3
Motif
Other DBs
NCBI-GeneID:
101945694
NCBI-ProteinID:
XP_008171054
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MDFLLFQFGLCSFKYDHTEAKYIMKSFNFYIFPKPFNRSSPDVKFVCQSSSIDFLANQGF
DFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGTLSYISPNATKCPVTIPEDQKKFI
ERVVEQIEDLIQNEENKSLQLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIVI
SKVDEEERKRREQQKQAKEQEELSDAVGFSRVIHAIANSGKLVVGHNMLLDVMHTIHQFY
CPLPEDLSEFKELAACVFPRLLDTKLMASTQPFKEIINNTSLAELEKRLKEIPFNPPEVE
SAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGSFLSPPKNHVSARSKLIEPFFNK
LFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQVSWIDDTSA
FVSLSQPEQVQIGNSPTHLWSKSMESSERDEGRYPWSQISKHCKHQQVC
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttgctttttcagtttggcctttgtagttttaaatatgaccacacagaagct
aaatacataatgaaatcattcaacttctatatttttccaaaacccttcaatagaagttca
ccagatgtcaagtttgtctgtcagagttcaagtatagactttttagcaaaccaaggattt
gattttaataaagtttttcgcaatggaattccatatttaaatcaggaagaggaaagacaa
ttacgggagcagtatgatgaaaaacgttctcaggcaaatggtgcagggaccctatcgtac
atttcccctaatgccacaaagtgtcctgtgacgattcctgaggatcagaaaaaattcatt
gagagagtggtggagcaaattgaagatttgatacagaatgaagaaaacaagagtttgcag
ttggagccatgcacaggatttcagaggaaactaatttatcagaccttgagctggaagtat
ccaaaaggtatccatgttgaaactctggagacagagaagaaggaaagatacattgtcatt
agcaaggtagatgaagaagagcgcaaaagaagagaacagcagaaacaagcaaaagaacag
gaagaactcagtgatgcagtgggattttccagagtcattcatgccattgctaattctggc
aaacttgttgttggacacaacatgctactggatgtcatgcacacgatccaccagttttac
tgtcccctacctgaagacctaagtgagtttaaggagttagcggcatgtgtctttcccaga
ctattggatactaaactgatggcaagtacgcaaccttttaaggaaattattaacaacaca
tcccttgcagaactggaaaagcgtttaaaagagattccattcaaccctcctgaagttgaa
agtgcagaagggtttccaagctatgacacagcttctgaacaacttcatgaagcaggctat
gatgcttacataacaggactgtgtttcatctccatggctaactacctaggttcatttctc
agtcctccgaaaaatcatgtatctgctagatcaaaactcattgaacccttttttaacaag
ttatttcttatgagggtaatggacataccatatctcaatttggaaggaccagacttgcag
ccaaaacgagaccatgttcttcatgttacatttcccaaagagtggaagactagtgatctt
taccagcttttcagtgcctttggtaatattcaggtatcttggattgatgatacatcagca
tttgtgtcacttagccagccagaacaagtacaaatagggaactcgccaactcacctgtgg
agtaaatccatggagtctagtgaaagagatgaggggaggtatccgtggtcacaaatctcc
aaacactgtaaacaccagcaggtatgctga
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integrated database retrieval system
