Chrysemys picta (western painted turtle): 101945795
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Entry
101945795 CDS
T04662
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03030
DNA replication
cpic03410
Base excision repair
cpic03420
Nucleotide excision repair
cpic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101945795 (RFC4)
03410 Base excision repair
101945795 (RFC4)
03420 Nucleotide excision repair
101945795 (RFC4)
03430 Mismatch repair
101945795 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpic03032
]
101945795 (RFC4)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101945795 (RFC4)
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101945795 (RFC4)
DNA replication proteins [BR:
cpic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101945795 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
101945795 (RFC4)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101945795 (RFC4)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101945795 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
101945795 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_22
AAA_11
AAA_16
AAA_30
DUF815
AAA_28
AAA_23
Mg_chelatase
AAA_24
AAA_14
SLFN-g3_helicase
RuvB_N
AAA_5
AAA_19
AAA_3
ResIII
bpMoxR
Viral_helicase1
AAA_7
DNAX_ATPase_lid
nSTAND3
TIP49_C
RNA_helicase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
101945795
NCBI-ProteinID:
XP_005286055
UniProt:
A0A8C3F0X3
LinkDB
All DBs
Position
9:91816789..91835521
Genome browser
AA seq
365 aa
AA seq
DB search
MQAFLKGPSSISTKAPASKERGTAAAAGASGEGKRLKPIPWVEKYRPKCVDEVAFQEEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILALARELYGPELFRQRVLELNASDERGIQVI
REKVKTFAQLTVSGSRSDGKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPLTSRCSKFRFKPLTDKIQQQRLWAVSEKENVKVSNEAMSCLVQVSEGDLR
KAITFLQSATRLTGGKEITEKVVTEIAGVVPKETIDGLLSACQSGSFEKLETVVKNLINE
GYAAAQLVNQLHDDIVEREDLTDKQKSIIAEKLAEVDKCLTDGADEYLQLISLCAVVMQQ
LTQNG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttctgaaaggcccgtcctccatcagcaccaaagcgccagcctccaaggag
cgagggacggctgccgccgcaggagccagcggcgagggcaagagactcaaacccatccct
tgggtggagaaatatcgtccgaagtgtgtggatgaagttgcattccaagaggaagttgtt
gctgtgctgaaaaaatccttagaaggagctgatcttcccaatctcttgttttatggccca
cctggaacaggaaagacttctactattttggcattagccagagaactctatggacccgaa
ttgttccgacagagagttcttgagttaaatgcttctgatgaacgtggaatacaagtgatt
cgagagaaagtgaagacatttgctcagctaactgtgtctggaagtcgttcagatggtaag
gtttgtcctccttttaagattgtgatcctggatgaagcagactccatgacttcagccgct
caggcagccttgagacgcactatggagaaagaatctaaaactacacgcttctgccttatt
tgtaattacatcagcaggataattgaacccttaacatctcgatgctccaaattccgtttc
aagcccctgactgataaaatccaacagcagagactatgggctgtttctgaaaaggaaaat
gtgaaagttagcaatgaggcaatgtcttgtcttgttcaagtgtcagaaggagacttaaga
aaagcaatcacatttcttcaaagtgctactcgattaacaggtgggaaagagatcacagag
aaggttgtcaccgaaattgcaggggttgtccctaaagaaacaattgatggactgctctct
gcctgtcaaagtggctcttttgaaaaactggaaactgtagttaagaatctgataaatgaa
gggtatgctgctgcccagcttgtaaaccagcttcatgatgatattgttgagagagaggat
ctcactgacaagcagaaatctattattgccgagaaacttgctgaggtagacaaatgcttg
acagatggtgcagatgagtacttgcaattgatcagtctctgtgccgttgtgatgcagcag
ctaactcagaatggctag
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integrated database retrieval system
