Chrysemys picta (western painted turtle): 101946265
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Entry
101946265 CDS
T04662
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03020
RNA polymerase
cpic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101946265 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
101946265 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101946265 (POLR2B)
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101946265 (POLR2B)
Enzymes [BR:
cpic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101946265 (POLR2B)
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101946265 (POLR2B)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101946265 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
101946265
NCBI-ProteinID:
XP_008161005
UniProt:
A0A8C3HN70
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgatgaagatgatgatgaaatcactccagat
ttatggcaagaagcatgctggatagttattagctcctattttgatgagaaggggttggtc
cgacaacagctggattctttcgatgagttcatccagatgtctgtgcagagaattgtagaa
gatgccccacctattgacctacaagctgaagctcagcatgccacaggggaagttgaagag
ccaccacgatacctgttgaagtttgaacaaatctatctctccaagcctacgcattgggaa
agagatggcgcaccttcacccatgatgcccaatgaagccagactgagaaatcttacatat
tctgcccccttgtatgtggacataactaaaacagttattaaagaaggagaggaccagtta
cagacacagcatcagaaaacctttataggaaaaattcctatcatgctccgttcaacatac
tgcctgttgaatggcttgactgatcgtgatctttgtgaactgaatgaatgtcctcttgac
cctggtggctatttcattattaatggatcagaaaaggttctgattgctcaagagaagatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcgaaatatgcctacacaggagaa
tgtagatcctgcctggagaattcctctcgaccaactagtactatatgggttagcatgctg
gccagaggagggcagggtgcaaagaagagcgctattggtcagcgtattgtagcaactctg
ccatatatcaaacaagaagtgcccatcattattgttttccgtgcattaggttttgtatct
gacagagacattttagagcacataatttatgactttgaagatcctgagatgatggaaatg
gtcaaaccttccttggatgaagcatttgtcatccaggaacagaatgttgcattaaacttc
atcgggtcaagaggtgcaaagcctggtgttaccaaagagaaaagaattaagtatgcaaaa
gaagtcttacagaaggaaatgcttccacatgttggtgtcagtgacttttgtgaaaccaaa
aaggcctattttctggggtacatggttcatagattactactggcagctctgggcagaaga
gaactcgatgacagagatcattatggtaacaaaagacttgatctggcagggccattgctt
gcattcttgttcagaggaatgtttaaaaatttgctcaaagaagtgagaatatacgcacag
aagtttattgacagagggaaagattttaacttggagctggcaattaaaacaaggattata
tcagatggtttgaagtactcattggctactgggaactggggtgatcagaagaaagctcat
caggccagagcaggagtatctcaggtgttaaaccgcctgaccttcgcatccacgctttcc
cacttgagacgcttgaattctccaattggtagagatggcaaactagccaagcccagacag
ctgcacaatacactgtggggaatggtctgtcctgctgagactccagagggccatgcagta
ggacttgtgaagaacttagccttgatggcttacatttctgtggggtctcagccatctccg
attctggaatttttagaagaatggagtatggaaaatctagaagaaatatctccagcagcc
attgcagatgcaaccaagatctttgttaatggctgctgggtagggatacacaaagatcca
gaacagctgatgaacacactaagaaaattacgtcgtcagatggacatcattgtgtccgag
gtctccatgatcagggatattagagagcgagaaatccgcatctatactgatgctggcaga
atttgcaggccacttttaattgtggaaaaacaaaagctgctgttgaagaagaggcatatt
gaccaactaaaagaacgagagtataacaactacagttggcaggatcttgtagccagtggt
gtagtagaatacatcgacacgctagaagaagagacggtgatgctggcaatgactccagat
gacttgcaggagaagggagtcgcatactgttcaacttacacgcattgtgagattcaccca
tccatgatcctaggagtatgtgcatctattattcctttccctgatcacaaccagtctcct
aggaacacataccagtctgctatgggtaaacaggctatgggagtttatattacaaacttt
cacgttcgtatggatacactagcccatgtgctgtattaccctcaaaaaccccttgtgact
acacgctctatggagtacttgcgatttagagagttgccagcaggtatcaactcaattgtg
gctattgcgtcatatactggttataatcaggaagactctgtcatcatgaaccgttctgct
gtcgatagaggttttttcagatctgtgttctatcgctcatataaagaacaagagtccaag
aaaggatttgaccaagaagaagtttttgaaaaacctacacgtgaaacttgtcagggtatg
aggcatgccatctatgacaaactagatgatgatggtttgatagcacctggtgtacgtgtg
tcaggagatgatgtcatcattggcaaaacagtaactctgcctgagaacgaagatgaactg
gaaagcactaatagacgatacacaaagagggactgtagcactttcctacgaactagtgag
actggtattgtagaccaggtcatggtaacccttaaccaggaaggatacaagttttgcaaa
attagggtgcgctctgtgagaatcccacaaattggagataaatttgccagcaggcatggt
cagaagggtacctgtggtatccagtacagacaagaggatatgcctttcacctgtgaaggc
atcacacctgacataatcatcaacccccatgccatcccttcccgtatgacaattggtcac
ttgattgaatgtcttcaagggaaggtatcagcaaacaagggagaaattggtgatgctaca
ccttttaatgatgctgtcaatgtgcaaaagatttccaatctactatccgattatggctat
catctgagaggaaatgaggttctctacaatggcttcactggacgcaaaatcacatcacaa
atcttcattggtcctacttactaccagaggttgaaacatatggtagatgacaaaattcat
tctcgtgcaagagggccaattcagattcttaacaggcaaccgatggaaggtagatctcgc
gatggtggccttcgttttggagaaatggagcgagactgtcagattgctcatggagcagct
cagtttttaagagagagattgtttgaggcttcagacccataccaagttcacgtttgcaat
ctttgtggaataatggcaatagctaacacaaggacacacacgtacgagtgcagggggtgc
cgtaataaaacacagatttccttggtgcgaatgccatatgcttgtaaactcctctttcaa
gagctgatgtccatgagtattgcacctcgtatgatgagtgtttag
DBGET
integrated database retrieval system
