Chrysemys picta (western painted turtle): 101946504
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Entry
101946504 CDS
T04662
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101946504 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpic03041
]
101946504 (PRPF8)
Spliceosome [BR:
cpic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101946504 (PRPF8)
Complex C
U5 SnRNP specific factors
101946504 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
101946504
NCBI-ProteinID:
XP_005298344
UniProt:
A0A8C3I865
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGGCAPVPSPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETCEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtgtttccctaccgtgggggctgtgccccggtgcccagtcccttggctccg
ctgcctgactacatgtctgaagagaagctgcaggagaaagcccgtaaatggcagcagcta
caggcaaagcggtatgccgagaagagaaagtttggttttgtggatgcccagaaggaggac
atgcccccagaacacgtgaggaaaattatccgggaccatggtgacatgacgaacaggaag
tttcggcatgacaaacgggtttatttgggtgccctgaagtacatgccccatgctgtccta
aagctcttggagaacatgccaatgccctgggaacaaatccgagatgttccggtcttgtac
cacatcactggtgctatctccttcgtgaatgagattccatgggtcatagaaccagtctac
atctcacagtgggggtcaatgtggatcatgatgagacgagagaagagagacaggcgtcac
ttcaaaaggatgaggttccccccatttgatgatgaagagccccctcttgactatgctgac
aacatcctggatgtggagcctctggaggcaatacagcttgagctggacccagaggaagat
gcccctgtcctggattggttctatgaccaccagccattgaaagacaacaggaagtatgtg
aacggttctacataccagcggtggcaattcactcttcccatgatgtccacattataccgg
ctagctaatcaactgctgacagatcttgtggatgacaattacttctacctgtttgatctg
aaggccttcttcacttccaaggctctgaacatggctattcctggggggcccaagttcgag
cctctggtccgagatattaacctgcaggatgaagattggaatgaattcaatgacatcaat
aaaataataatcagacagccaatcaggacagagtacaagattgccttcccatacctgtac
aacaacctaccgcaccatgtgcacctgacctggtatcacactcctaatgtggtcttcatt
aaaacagaggatcctgacctgccagcattttactttgatccattgatcaatcccatctct
cacaggcactctgtcaagagtcaggaacccttgcctgatgatgatgaagagtttgagtta
ccagaatttgtggagcctttcctgaaggacactccgctgtacacggacaacacggccaat
ggcattgcactgctgtgggcccctcgaccctttaacttaagatctggcaggacacgcaga
gctctagacatcccattggtcaagaactggtatcgagagcactgcccagcagggcagcca
gtgaaagtgagggtctcctaccagaagctgctgaagtactatgttctgaatgcactcaag
cacaggcctcccaaggctcagaagaagaggtacctattccgctccttcaaggcaacaaag
ttcttccagtcaacaaagctggactgggtggaggttggcctgcaggtgtgccgccagggt
tacaatatgctgaacttgctgattcataggaagaacctcaactatctccacctggactac
aatttcaacctcaaaccagtcaagaccctcaccaccaaggaaagaaagaagtctcgtttt
ggtaatgctttccatctgtgccgagaggttctgcgtttgaccaaactggtggtggatagc
catgtccagtacagattgggaaatgtggatgcatttcagttggcagatggcttgcagtat
atctttgcccatgtgggacagctgacaggaatgtacaggtacaagtacaaactgatgagg
cagattcgtatgtgcaaggacctgaagcatctcatctactacagatttaacactgggcct
gtggggaaggggcccggctgtggcttctgggctccaggctggagagtatggctgttcttc
atgagaggcattaccccactgttggagcggtggctgggcaacctgctggccaggcagttt
gaaggccgacactcaaagggtgttgcaaagactgtaacaaagcagcgtgtggaatctcac
tttgacctggagctgagagctgcagttatgcatgacattctcgacatgatgccagagggg
atcaagcagaacaaagctcggaccatcctgcagcacttgagtgaggcctggaggtgctgg
aaggccaacattccctggaaggttcctgggctgccaactcctattgaaaacatgatcctg
agatacgtgaaggcgaaagctgactggtggactaacacagctcactacaacagagagcgg
atccgccggggtgccactgtggacaagactgtgtgcaagaagaacctgggtcggctgacc
aggctttacctgaaagctgagcaggagaggcagcataattacttgaaggatggcccctac
atcactgcagaggaggctgtcgcagtatataccaccactgtgcactggctggaaagcagg
aggttctcacccatccccttccctccgctctcctacaagcatgacaccaagctactcata
ttggccttggaaaggctgaaggaagcctacagtgtgaaatcccgtctgaatcagtcgcag
agagaggagttgggtcttattgagcaggcgtatgataatccccacgaagctctgtccaga
atcaagcgacaccttctgactcagagagcctttaaagaggttggtattgagttcatggac
ctctacagtcacttggttcctgtttacgatgttgaacccctggagaagattacagatgcc
tatctggatcaatacttgtggtatgaggctgacaagcgaagactcttccctccttggatc
aaacctgcggacactgaaccgcctccactgctggtgtacaaatggtgccaaggcattaac
aatctgcaggatgtctgggaaacatgtgagggtgaatgtaatgtgatgctggagtcccga
tttgagaagatgtatgagaagattgatttgacgctgctcaacaggctcttgcgtcttatc
gttgatcataacattgctgactacatgacagctaagaacaatgtggtgatcaattacaag
gacatgaaccacaccaactcctacgggattattcgggggttgcagtttgcttccttcatc
gttcagtattatgggctggtgatggacctgttggtattgggccttcaccgagccagcgag
atggctggcccaccacagatgccaaatgacttccttagcttccaagatattgccactgag
gtggctcatcccatccgcctcttctgcagatacattgatcgcattcacatcttcttcagg
tttacagcagatgaggcaagggacttgatccagcgctacctgacagagcatcccgatccc
aacaatgagaacattgtgggctacaacaacaagaagtgctggccccgagatgcccggatg
cggctcatgaagcacgatgtgaatcttggccgtgctgtattctgggacattaagaaccgc
ctgcctcgctcagtcaccacagtgcagtgggagaacagctttgtatctgtttatagcaag
gacaatcccaacctgctgttcaacatgtgtggctttgagtgccgcatcctacccaagtgc
cgcaccagctatgaggagttcacccacaaggatggtgtgtggaacctgcagaatgaggtg
accaaggagcgcacagctcagtgctttctgcgtgtcgatgatgagtctatgcagaggttt
cacaaccgagtgaggcagatactcatggcctccggctccacaaccttcacaaagattgtg
aacaaatggaacacagccctgattggcctgatgacatatttccgggaggctgtcgtgaac
acgcaggagctgcttgacctgctggtgaagtgtgagaacaagattcagacccgaatcaaa
attggcttgaactccaagatgccaagccgcttccccccagtggtattctacacccccaaa
gagctgggggggttgggcatgctgtccatgggccatgttcttatcccccagtctgacctg
agatggtccaagcagacagatgtcggcatcactcacttccgctcagggatgagccatgag
gaagaccagctgatcccaaatctgtaccgctacatccagccatgggagagcgagttcatt
gactcgcagagagtgtgggcagaatacgccctcaagaggcaggaggctattgcccagaac
aggcgtctgactctggaggatctagaggactcatgggacagagggattcctcgcattaat
accctcttccagaaagaccggcacacccttgcttatgataaaggctggagggtcaggaca
gacttcaaacagtaccaggtcctgaaacagaacccgttttggtggacacatcagcgccat
gatgggaagctctggaacttgaacaactaccgcacagatatgatccaagcactgggtgga
gtggaggggatcctggagcacaccctcttcaagggaacctacttcccaacctgggagggt
ctcttctgggagaaggccagtggctttgaggagtcaatgaagtggaagaagttgacaaat
gcccaaagatcgggtttgaaccagatccccaacagacgattcaccctctggtggtctcct
accattaacagagccaatgtgtatgtcgggtttcaggtgcaactggatttgacaggtatc
ttcatgcatggcaagatccccacattgaagatttccctcattcagatcttccgagcccac
ttgtggcaaaagattcacgagagcattgtaatggatttgtgtcaagtgttcgatcaggag
ctggatgctctagagattgagaccgtgcagaaggagaccatccaccccaggaagtcctat
aagatgaactcttcctgtgcagatatcctcctctttgcctcctataaatggaatgtgtca
cggccgtcactgcttgcagactctaaggatgtgatggacagtaccaccactcagaaatac
tggattgatatccagctgcgctggggcgactatgactcccatgacattgagcgctatgca
agagccaagttcctggattacaccacggacaacatgagtatctacccctcccccactggc
gtgctcattgctattgacctggcctataacctgcacagtgcttatgggaactggttccct
ggaagcaagcctctgattcagcaggccatggccaagattatgaaggcaaacccggcactg
tacgtactgagggagcgtatccgcaaggggctgcagctttactcatcagagcccacagaa
ccctatctctcctcccagaactatggggagctcttctccaatcagatcatctggtttgta
gatgacaccaacgtgtacagagttaccattcacaagacctttgaagggaacttgaccaca
aagcccatcaatggggccattttcatcttcaatcccaggactgggcaactcttcctaaag
atcatccatacatctgtgtgggcaggacagaagcgtctgggccagctggccaagtggaag
actgctgaggaagtggctgccttgattcgctccctccctgtggaggagcagcccaagcag
atcatagtcaccaggaagggcatgctggacccacttgaggtgcacttgctggatttccca
aacattgtgatcaaaggatcagagctgcagctgcccttccaggcctgcctgaaagttgag
aagtttggagatctcatcctgaaggctactgagccccaaatggttctcttcaatctttat
gatgattggctgaaaaccatctcctcctacacggcattctcacgtctgatcctgattctc
cgggcactgcatgtaaacaatgaccgtgccaaagtgattctgaaaccagacaagaccacc
ataacagagcctcaccacatctggcccaccctgacagatgaggagtggatcaaggtggag
gtgcagctcaaggacctgatcctcgctgactatgggaaaaagaacaacgtgaatgtggca
tccctgacgcagtcggagatccgagatattatcctggggatggagatctctgccccctct
cagcagagacaacagattgcagagattgagaagcaaaccaaggagcagtcgcagctgacg
gccacgcaaacccgcactgttaacaagcatggtgatgaaatcatcacctccacgaccagc
aactatgaaactcagaccttctcctccaagacggagtggcgagtcagagcaatctctgct
gccaatctccacttgagaacaaaccacatctatgtctcgtctgatgacatcaaggaaacg
ggctacacctacatccttcccaagaatgtgctgaagaaattcatctgcatctcagacctc
agggcccaaattgcagggtacttgtatggtgtgagccctccagataatccccaagtgaag
gagatccggtgcattgtgatggtgccccagtggggaactcatcagacggtgcatctccct
ggccagctgccgcaacatgagtacctcaaggaaatggagcccctggggtggattcacacg
caaccgaatgagtcccctcagctctcgccgcaggatgtcaccacacatgccaaggtcatg
gctgacaatccctcatgggatggggagaaaaccatcatcatcacctgcagttttacccca
ggctcctgtactctgaccgcctacaagctgactcccagtggctatgagtggggcaggcag
aacacagacaaaggaaacaaccctaagggctacctgccatcccactatgagagggtgcag
atgttgctgtcagaccgcttccttggcttcttcatggtaccagcacagggatcctggaac
tacaacttcatgggtgttcgtcatgatcccaacatgaagtatgagctgcagctagcgaat
cccaaggagttttaccatgaggttcatcgcccatctcacttcctcaacttcgccttgttg
caggaaggggaggtctactctgcagaccgagaggatctctatgcatag
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integrated database retrieval system
