Chrysemys picta (western painted turtle): 101946775
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Entry
101946775 CDS
T04662
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101946775 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpic04131
]
101946775 (SCARF1)
Membrane trafficking [BR:
cpic04131
]
Endocytosis
Phagocytosis
Scavenger receptors
101946775 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_Teneurin
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
101946775
NCBI-ProteinID:
XP_042713988
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MAQLLLLLLCLHFWPWIGSSAQELDPNGKNVCKATSLSAGLVCCRGWKQEGRDCTAALCE
GEDACKVDEVCVRPGICLCKPGFFGANCNSRCPDQYWGSDCKKSCSCHPNGKCDPVSGQC
TCNANRWGVLCEFPCQCGPHGHCNTRTGACHCEPGWWGPNCKKQCLCRVAGSHCDPVSGQ
CVCTQGWWGRRCSLRCNCHLSPCAQDSGRCECRAGFWGPLCQHHCDCLHGNCNPLDGHCS
CNPGYQGRSCGDPCLAGYYGSQCRYSCGHCKQSQPCSPVDGFCLACDSGWNGTLCKKLCT
PGYHGENCAQMCPSCRKGETCHPETGACLNCDPGKTGPSCDAPCPAGTFGDGCRFTCPDC
VNGSCDPVAGECICQAGYWGTSCNETCPEGFFWSELFFPLPHTLWGLCAQMAVADGDAVS
RMKHHVQGVLANLSSMLPCLSLSGYKLPRVTVSHHDTEIPFNPSFIEPPSAAWASDSSFS
SSFDTDDEGPAYCVPAREDVPAVAGFELQEGSSKCHEFPDASAFNSEDVSQPFTIPRTSS
IARAKRPSVSFAEGTKFGPQCQRGPMETPNTTRKPKAPWGLTKLPSHQHHADPEEGPQQG
GSPGDCYENPEPISEAEDSHRPSPRGTPGGHRMAVSSGSHVAQRVEALESALNPNTLDVR
GKEQNVTTIYVTVGTAGKSSKPNESANGSREGTVQAVLKRLGSFQRVKRAFREEPMVRKS
TESIQKPPRRALGPERDSRDLFPQPAPPHKDSSKTTGLEPCESPALLTDRHQIDVPVKRE
PLIPTSPIFERLVAQEGEDGVTGDPKKSESLEEARSLETNEQTVVEEEPKYENVSPNRCP
SDEPPATSPDCAANT
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctgctgttgttactcttgtgtctccatttctggccatggattgggagctct
gctcaagagctggaccctaatgggaagaatgtgtgcaaggccaccagcctctctgcaggt
ctggtctgctgccgaggttggaaacaggaaggcagggactgcacagctgcgctgtgtgaa
ggggaggatgcttgcaaggtggatgaagtgtgtgtgagacctgggatctgcctctgcaaa
cctggtttctttggagccaactgcaactcccgctgccctgaccagtactggggctcggac
tgcaagaagagctgttcatgccatcccaatgggaagtgtgaccctgtgagcggccagtgc
acttgcaatgccaaccgctggggagtgctctgcgagttcccatgccagtgtgggcctcat
ggccactgcaacacccgcactggagcctgtcactgtgagccaggctggtggggaccgaac
tgcaagaagcagtgtctgtgcagggtggccggctcccactgtgaccctgtctcagggcag
tgcgtctgcacccagggctggtggggcaggagatgcagcttgagatgcaactgccacctc
tcaccctgtgcccaagactcaggcaggtgtgagtgcagggctgggttttgggggccattg
tgccaacatcattgtgactgcctgcatgggaactgcaaccctcttgatgggcattgcagc
tgcaatcctggctatcagggcaggagctgtggggatccctgtcttgccggttattacgga
tctcagtgcagatacagctgtgggcactgcaagcagagccagccctgctctcctgtggat
gggttctgcctggcatgtgactctggctggaacggtaccctctgtaagaagttgtgcacg
cctggataccatggggagaactgtgcacagatgtgtcccagctgtcgaaaaggggagacc
tgtcatccagagacaggggcttgcttgaactgtgaccctggcaagacaggacccagctgt
gacgcaccctgccctgctggaacatttggagatggatgccggttcacctgtccagactgt
gttaatgggagctgtgatccagtggctggggagtgtatctgccaggctggctattggggc
accagctgcaatgagacctgcccagagggttttttttggagcgaactgttcttccccctg
ccacacacactctggggactgtgtgctcagatggctgttgctgatggtgatgcggtctcc
agaatgaaacatcatgtgcagggggtgctggcaaatctcagctccatgttaccttgcctc
tcactgagtggctacaaactcccccgagtcacagtctcccaccatgacacagagattccc
ttcaatcccagcttcattgaaccgccttctgctgcctgggcctcagacagctccttctcc
tcttcctttgacacggacgatgagggcccagcctactgtgtccctgccagagaagatgtt
cctgcagtggcaggctttgagcttcaggaaggcagctccaagtgtcatgaatttcctgac
gcatcagcatttaactccgaggacgtctcccagcctttcaccatcccccgcacatccagc
attgccagagccaagaggccctcggtgtcttttgcagaaggaactaaatttggccctcag
tgtcaaagaggtcccatggagacaccaaataccactcggaagcccaaagccccctggggt
ctcaccaaacttccctctcaccagcaccatgctgacccagaggaggggccccagcagggt
gggtcgccaggtgactgttacgaaaacccagagcccatctccgaggctgaggatagccac
cggccctcccccaggggtaccccaggaggccataggatggcagtgtccagtggcagtcat
gtggcccagagagtcgaggcccttgagtcagctttgaatccaaacactttggatgttagg
gggaaggagcagaatgtcacaaccatttacgtgactgtggggacagcagggaaatcctcc
aagcccaatgagagtgccaatggaagcagagaggggacagttcaggctgtactgaaacgt
ttgggtagcttccagagagtaaaaagggctttcagggaggagcccatggtgaggaaaagt
actgagagcatccagaaacctccccgcagggccctgggcccagagagggactccagagac
ctgttcccccagccagcccctccacacaaggacagctccaagacaacaggtctggagccc
tgtgagtcacctgcgctccttacagatagacaccagatagatgttcctgtgaagagagaa
cctctcatccccacatctcctatatttgaaagactagtggctcaggaaggagaagatggg
gttacaggggaccccaagaagagtgaaagtcttgaagaggccagaagcctagaaacaaat
gaacagactgttgttgaggaggaacccaaatatgaaaatgtgtctccaaatcgctgtcct
tcagacgagcctcctgccacctcccctgactgtgcggccaacacctga
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