Chrysemys picta (western painted turtle): 101947072
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Entry
101947072 CDS
T04662
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03018
RNA degradation
cpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101947072 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
101947072 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101947072 (LSM7)
03041 Spliceosome [BR:
cpic03041
]
101947072 (LSM7)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101947072 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
101947072 (LSM7)
Spliceosome [BR:
cpic03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101947072 (LSM7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
101947072
NCBI-ProteinID:
XP_005309366
LinkDB
All DBs
Position
25:complement(578940..590817)
Genome browser
AA seq
103 aa
AA seq
DB search
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQEG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaaaagaagaagaaagagagcattttggatctctcaaaatacattgac
aaaacaattcgagtaaaattccaaggtggtagggaagctagcggagtcttgaaaggattt
gaccctcttctaaaccttgtgcttgatggcactattgaatatatgagagatccagatgac
caatacaaactaacagaggatacccgtcagctgggactggtggtttgcagaggaacatcc
gtggttcttatttgtccacaggatggaatggaagctattccaaaccctttcattcagcag
caggagggctaa
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