Chrysemys picta (western painted turtle): 101947188
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Entry
101947188 CDS
T04662
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X3
KO
K14407
cleavage stimulation factor subunit 2
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101947188 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101947188 (CSTF2)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101947188 (CSTF2)
U7-dependent histone pre-mRNA processing factors
101947188 (CSTF2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101947188
NCBI-ProteinID:
XP_005288392
UniProt:
A0A8C3HM25
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Position
9:36106103..36124600
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AA seq
642 aa
AA seq
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MAGLAVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPIN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNPQPVPGPGPGPGPGPNAQMNQQNPPSSQPQPIGGMH
VNGAPPLMQPPMQGGVPAPGQMPASVAGPGPGPLAPGGGMQPQVGMPGGGPVPLERGQGN
LQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVT
GEVEPRGYLGPPHQGPPMHHMPGHDNRGPPPHEMRGGPMGEPRPLMGEPRGPLMDARGGR
DPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGM
EPRGMEPRGMEPRGMEPRGMDARGMEPRGMEPRGMEPRGPGPNPRGPMPGGIQGPGPLNL
GASGPQGPRQVPNMPGAGIQGGGMPGAGIQAGAMPGTVVQGAGQPGGFSPGQNQVTPQDH
EKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggcggtgcgggaccccgcggtggatcgctcgctgcgctccgtgttcgtg
gggaatatcccatacgaagccacagaggagcagctaaaggacattttctcagaggtcgga
cctgtcgtcagtttcaggttggtgtatgacagggagacaggcaaaccaaagggatatggc
ttttgtgagtaccaagaccaggagacagcgctcagcgccatgcggaacctgaatgggcgt
gagttcagcgggagggcgttgcgtgtggacaacgcagccagcgagaagaataaggaggaa
ctgaagagcttgggcactggtgcccctatcatagagtcaccatatggagaccctataaat
cctgaagatgctcctgagtctatcagcagagcagttgccagcctgccgcctgagcagatg
tttgagctgatgaagcagatgaagttgtgtgtgcagaacagccctcaggaggcacggaac
atgctgctccagaaccctcagctggcatatgccctgctccaggcccaagtggtgatgagg
atcgtcgatccagagatcgctctgaaaattctgcatcgtcagaccagtgttccacctctg
attccaggcaacccacagccagttccagggcccgggcctgggcctggaccaggtcctaat
gcacagatgaaccagcagaatcccccatcgtcccagccacagcccataggtggcatgcat
gtaaatggagctcctcctctgatgcagcctcctatgcagggtggagtgccagccccagga
cagatgccagcctctgtagccggcccaggccctggccccttggctcctggaggtggaatg
cagcctcaggttgggatgccaggaggtggaccagtgcccttggaacgtggacaaggaaac
ctgcagctctcgcccgtgggacctgccaggcctgcatctattgagcgagttcaagtgccc
atgccagacccgagggcccctatgcagcgtggaccattacctgctagcggcccaccaccc
cggggccttctgggagatgccccaaatgacccacgtggagggaccctgctttcagttact
ggagaagtggagcccagaggttaccttgggccaccccaccagggtccacccatgcaccat
atgcccggccatgacaatcgtggcccacccccacatgaaatgaggggaggaccaatggga
gaacccaggccattgatgggagaacctagagggcctttgatggatgctcgaggtggaaga
gatcccaggggcatggaaccgagagggatggagcccagagggatggaaccgagagggatg
gagcccaggggcatggaaccgagaggcatggagcccaggggcatggaaccgagaggcatg
gagcccaggggcatggaaccgagaggcatggagcccaggggcatggagcccaggggcatg
gagcccaggggcatggagcccaggggcatggagcccaggggcatggagcccagagggatg
gatgccagaggaatggaacccagagggatggaacccagagggatggagcccaggggtcct
ggccccaacccaaggggcccaatgcctggtggaattcaaggacctgggccacttaacttg
ggagcaagtggccctcagggacctagacaggttcccaacatgccaggggcaggcatacaa
ggaggtggtatgccaggggcaggcatacaagcaggagccatgccagggacggtggtacaa
ggagctggccagccaggaggctttagccctgggcagaaccaggtcaccccccaagatcat
gagaaggctgccctgatcatgcaggttctccagctgactgcagaccagatcgccatgttg
cccccagagcaaaggcaaagcatccttatcctaaaggagcagatccagaaatccactggg
gctccatga
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