Chrysemys picta (western painted turtle): 101947586
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Entry
101947586 CDS
T04662
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 isoform X2
KO
K14311
nuclear pore complex protein Nup188
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101947586 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101947586 (NUP188)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101947586 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
101947586
NCBI-ProteinID:
XP_005293443
LinkDB
All DBs
Position
20:3608585..3657747
Genome browser
AA seq
1737 aa
AA seq
DB search
MAAGGLCARSSRELWTILLGRSALREPAQIAAELNKHWQRLLEGLSYYKPPSASSAEKVK
ADKDVAAPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQALM
LKLADYYYEERMCILRCVLNLLTYFQDERHPYMAQYSQCVEKLDKELVPNYRKQFEDLYK
AEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEVIFLYYAYFEMAPDELLTFARLFKEQ
GFGSRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHERVLDDRTEEHKFASNGRM
HQEMDHLLLTLGDISHHAPVLLAWALLRHTVTPEESTNAIRRMGSTAIQLNIFQYLTKLL
RSLSSGGKNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDAACEVLAASSIPQLFWR
TEPTAGLGIILDSVCGMFPHLLSPLLQLLKALVSDKSTAKKVYSFLDKMSFYIELYKHKP
PDVISHEDGTLWRRQVPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTL
FTCEIEMLLHVVSTADVIQHCQRVKPVIDLVHKVISTDVSIADCLLPITSRIYMLLQRLT
SVISPPVDVIASCVNCLTVLAARMPAKVWTDLHHTGFLPFVANPVSSMSHMISAEGMNAG
GYGNLLMSVEQPQGEYGVTISFLHLVTTLVRGQLGSTQSQGLMPCIVFVLKEMLPNYHKW
RYNSHGVRERIGCLILQLIHAILNLCPEMDPHSSNAPSLQSLCIFSLANTEAGQAVINIM
GIGVDTIDMVMASQSCSDESLGQGQLLIQTVKLAFSVTNNVIRLKSPSSVVSPLEQALTQ
HGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLT
RLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGEWSCLQVVL
ELIDSKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLSP
PSETSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSTEKRFAYWSGYVKSLV
LHMAKTEGSSCTSLTEYQMLISAWRMLLIISTSHADIMHLTESAVRQQLFLEVLSGTKAL
LLVPMSVLCLQLGSMLCTLLLILLRQWKSELGSVDKIINSLTQILEGVLQADQQMMEKTK
AKVFSALITVLQMKEMKVSEIPQYSQLVMSVCETLQDEVIVLFDQTRHSLTSGDSADDKD
SMETDDACRGKHKDQRDGVCVLGLHLAKELCEVDEDGDYWLQVTRKVPILPTIFTALEIS
LRVKQNLHFTEASLHLLLTLARTQQGAAAVASAGVTQSICLSLLSVYQLSTNGTVQTPAS
SRKSLDAPSWPGVYRLSISLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSL
ACLEEADHTVGFILQLSNFMKEWHFHLPQLLRDIQVNLCYLCQACTSLLHSRKMLQHYLQ
TKNGDSLPSAVTPRVQRTPQASSKHPSPESEAAEQKALRTVQYGLLKILSKSLAALRHFT
PDVCQILLDQSLDLAEYNLLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGELDKKKE
PFAQAAGLNTQEETKTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSE
LSTLLSSLSRYFRRGGPSSPASGVLPSPQGKSASKIGPEGQEPLIQLVQAFVRHVQR
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcgggctgtgcgcgaggagcagcagagaactatggaccattctgctgggc
agatcggctttgagagaacctgctcagattgcagcagagttgaacaagcattggcagagg
ctactagaggggctttcatactacaaacctcccagtgcaagttcagccgaaaaagtaaaa
gctgataaagatgtggctgctccactgaaggaactgggcctgaggatcagcaagtttttg
gggctggatgaagagcaaagtgtgcagttattgcagtgttatcttcaagaggattacaga
gggacccgggactcacttaagactgtcctgcaggatgaaaggcagagtcaggctctgatg
ttgaagcttgctgactattactatgaagaaagaatgtgcattctgcgctgtgtcctcaac
ctactcacttattttcaggatgagaggcacccctacatggcacaatactcacagtgtgtt
gagaagctggacaaggaactggttcctaattaccggaaacagtttgaagatctatacaaa
gcagaagctcctacatgggaaacacatggaaatctcatgacagagcgccaggtgtcccgc
tggtttgtgcagtgcctccgcgagcaatccatgcttcttgaagtcatcttcctttactat
gcatactttgagatggcacctgatgagctgctgacctttgccaggcttttcaaagaacag
ggatttggctctagacagaccaacaggcatttggtggatgaaagcatggatcacctggtg
gatcgtattggctacttcagtgctcttatcctggtggagggcatggaaattgactccctg
catgagcgtgtgttggatgataggacggaggaacataaatttgccagtaatgggcgtatg
caccaggaaatggaccatctgctgctgactttaggggacatctctcatcatgcccctgtg
ctcttggcctgggctttgctccgtcacacagtaaccccagaggagtcgaccaatgcgatc
aggcgaatgggaagtactgctatccagctgaatatattccagtacctgacaaagctgcta
cggtcactcagcagtggggggaagaattgtactgccagcacagcttgcatgtgtatttat
gggctgctttcctttgttcttacctcgctggaattacatacgttaggcaatcagcaggac
atcattgatgcagcctgtgaagttctagcagcttccagcattccacagctcttctggagg
acggagccaaccgcaggtctgggtattatcttggacagtgtgtgtgggatgttcccacat
cttctctctcctcttctgcaactgctcaaagcccttgtatcagataaatctactgcaaaa
aaggtgtacagtttcctggataaaatgtccttctacattgagttgtacaaacacaagccg
cctgatgtgatctcgcatgaagatggcaccctttggagaaggcaggtgccaaagcttctc
tatcccctggggctgggccagacaaacctacgaatacctcagggaacagtgggccaggtg
atgctggatgaccgggcatatttagtacggtgggaatattcctacagcagctggacattg
ttcacctgtgaaattgagatgctgctccatgttgtatcgacagcagatgtgattcagcac
tgccagagggtgaagccagtcattgacctggttcacaaggtcatcagcaccgatgtgtca
atagcagattgtcttctgccaatcacatcacggatctacatgctgttacagaggttaaca
agtgtgatctctcccccagtggatgttattgcttcttgtgtcaattgtttgactgtattg
gctgcccgcatgccagctaaggtctggactgatcttcaccacacagggttcttaccattt
gttgccaatccagtttccagtatgagtcacatgattagtgctgagggaatgaatgctggg
ggctatggaaacctgttgatgagcgtggaacagcctcagggcgagtatggtgtcaccatc
tccttcctacacttggtcacaactcttgtccgtgggcaacttggcagcacccagagccaa
gggctgatgccctgcattgtatttgtgctgaaggaaatgttaccaaactaccacaaatgg
cgctataactcccatggagtgagagaacgaattgggtgcctaatcctgcagctcatccat
gctattctgaatctctgccctgaaatggatcctcacagcagcaatgctccaagcctgcag
tccttgtgcatcttcagcctggccaacacggaagcaggacaggctgtcattaacatcatg
ggcatcggtgtggacaccattgatatggtaatggcctcacagtcctgtagcgatgagtca
ctgggccagggccagctgctgatccagacagtaaagctggcgttctcggtcaccaataac
gtcatccggttgaaatccccttctagtgtggtatccccactagaacaggcacttactcag
catggtgctcatgggaacaatctgattgctgtcttagccaaatatatctaccacaaacac
gacccagcactgccacgccttgccatccagctgctcaaacgactcgctacggtggctcca
atgtctgtttacgcctgccttgggagtgatgctgctgccattcgtgatgcctttttgacc
cggctgcagagtaagattgaggacatgcgcattaaagtcatgatcctggagttcctcact
gttgctgtagagacacagcctgggctcattgagctgttcctgaacctggaagtgaaagat
gggagtgatgggtcaaaggaattcagcttaggggaatggagttgcctccaagtggtcttg
gaactgatagactccaaacagcaggaaagatactggtgccctcccctcttgcaccgggct
gccattgcattccttcatgctctgtggcaggaccgtcgggatagtgccatgctagtcctg
aggaccaagccaaagttttgggaaaacttaaccaaccccctctttgggaccctttctccc
ccctcagaaacatcagagctcagtgtcttggacacttgtgccttaatcatgaaaatcatc
tgcctggagatctactatgtggtcaagggctcactggaccagtccctgaaagacaccctg
aagaagttctccacagaaaagcgctttgcttactggtcaggatatgtgaagtcattggta
ttgcatatggcaaagacagagggtagcagctgcacctccttgacggagtatcagatgctg
atctcagcctggcgaatgctgctgattatctccaccagtcacgcagatataatgcatctg
actgaatctgcagtccggcagcaactgtttctggaggtgctaagtgggaccaaagcttta
ctgctggtccccatgtcggtgctgtgcctgcagctggggtccatgctgtgcacccttttg
ctgatcctgctgagacagtggaagagcgagttgggttctgtggataaaatcataaactcc
ttgacgcagattctggagggagtgctgcaggcagatcagcagatgatggagaagaccaag
gccaaggtgttctctgctctcatcactgttctgcagatgaaggagatgaaagtgagcgag
atccctcagtactcccagctggtgatgagcgtgtgcgagaccctccaagatgaagtaatt
gtgctctttgatcagacacgacacagcctcacgtctggagactctgccgatgacaaggac
agcatggaaacagatgatgcctgccggggtaaacacaaggaccagcgagatggggtgtgt
gttctagggctgcatctggcaaaggaactctgtgaagtagatgaagatggagattactgg
ctgcaggttaccaggaaggtccctattctgcctactatcttcactgccctagagatcagc
ctgagagttaaacaaaaccttcacttcacagaagcctcattgcatctactgctgacctta
gccaggacgcaacagggtgcagcagctgtggctagtgctggtgtcacacagagcatctgt
ttgtccctcttgagcgtataccagctcagcactaatggaacagttcagacacctgcttca
tctcggaagtctctggatgccccatcctggcctggggtctatcgtctctccatatcattg
atggagcgccttcttaagacactaaggtacaacttcctgacggaggcactggactttgtg
ggtgtccatcaggagaggattcttcagtgcctgaatgcagtacggacagtgcagagcctg
gcctgtctggaagaagctgaccacactgttggcttcattcttcagctctccaactttatg
aaagagtggcatttccacctgccgcagctcttgagggacatacaggtgaacttgtgttac
ctctgccaggcttgtacctccctcctgcatagccgcaaaatgcttcagcactacctgcag
acaaaaaatggtgactccctcccatcagctgtgacacctcgagtgcaacgcaccccccag
gcctcctccaagcatccaagccctgagtcagaggcagccgagcagaaggcactgcgtaca
gtgcagtatggtctcttgaaaatcctcagcaaatctctagctgccctacgccacttcacc
cccgacgtctgccagatcctcctcgatcagtcactggacctggctgagtacaaccttctc
tttgttctgagttttacaacacctgccttcgattcagatgtcgctccctcctttgggacc
ctcctggccactgtcaacgtagcccttaacatgctgggagagctggataagaagaaagag
ccgttcgctcaagctgcagggctgaatacacaagaggagactaaaactcttaagtctttg
ctcatgtttacaatggaaaactgtttctacctgctcatctcccaggctgttcggtatttg
agggacccagcggtgcatccacgagacaagcagcggatgaagcaggaactcagctccgag
ctgagtacactgctctcaagcctgtctcgttactttcgccggggcggcccctcttctcca
gccagtggggttcttccctccccccagggaaagtctgcctccaagattggccctgagggg
caggagcctttgatccagctggtacaagcctttgtcagacatgtacagcgatag
DBGET
integrated database retrieval system
