Chrysemys picta (western painted turtle): 101947618
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Entry
101947618 CDS
T04662
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101947618 (PTBP1)
03041 Spliceosome [BR:
cpic03041
]
101947618 (PTBP1)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101947618 (PTBP1)
Spliceosome [BR:
cpic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101947618 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
101947618
NCBI-ProteinID:
XP_005281110
UniProt:
A0A8C3FS82
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MDGIVQDITVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRV
IHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVSYYTTVTPV
LRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALSASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAP
GIISASPYAGAGFPPAFAIPQAGLSVPNVHGALAPLAIPSAAAAAAAAGRMGIPGLTGAG
NSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLN
GQKLNGKPIRITLSKHQTVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSAT
LHLSNIPPSITEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIELHNHD
LGENHHLRVSFSKSTI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtccaagatataacagttggtacaaagcggggatctgacgagcttttc
tctacttgtgttactaacggaccctttatcatgagcagcaactctgcttctgcagctaat
ggaaacgacagcaaaaaattcaaaggtgacagtagaagtgcgggggtcccttcgcgagta
atccacgtccgtaaactccccagtgacgtcacagaggcagaagtcatttctttgggatta
ccttttggcaaagtcaccaatcttctaatgctgaaaggaaaaaatcaggctttcatagaa
atgaacaccgaggaagcagccaacaccatggtaagttactacaccacagtcactccagtc
cttcgaagccagcccatctacattcagttctccaaccacaaggaactcaaaacagacaac
tctccaaaccaagcacgggcccaggcagctctgcaagcagtgaactctgttcagtctgga
aacctggcactgtcagcctctgctgctgcagtggatgcaggaatggcaatggctggtcag
agccctgtcttgaggatcattgtggaaaatctcttctatcctgtcactctggatgtcctg
catcagattttttccaagtttggcacagtgctgaaaataattacattcaccaagaacaac
cagttccaggccctgttacaatatgcggaccctatgagtgctcagcatgccaaactgtct
ttagatgggcagaatatctacaatgcctgttgcacgttgcgcatcgacttctccaaactc
acaagcctcaatgttaaatacaacaatgataagagcagagattacacacgaccagattta
ccttctggggatagccagccctctcttgatcaaaccatggcagctgcttttggagctcca
ggaataatttctgcctctccatatgcaggagctggcttccctcctgcctttgcaattcct
caagcaggcttgtcagttccaaatgttcacggagcacttgctcctttggctatcccatca
gcagcagctgcagcggctgcagcaggacggatgggcattcccggcctcactggggcaggg
aactccgttctgctggttagcaatctgaaccctgagagagttacaccccaatgcctcttt
attcttttcggagtctatggtgatgtgcaaagggtgaagatcttatttaataagaaggag
aatgccttagttcaaatggctgatggaaaccaggcccagcttgcaatgagtcacttaaat
ggtcagaagcttaatgggaaacccatccgtatcaccctgtccaagcatcagacagtacag
cttccccgtgagggacaggaagaccaaggcttgactaaagactatggaaactctcctcta
catcgtttcaagaaaccaggctccaaaaacttccagaatatcttcccgccttctgctacc
cttcacctctccaatatcccaccttcgataactgaagaagaccttaagatgctgttctca
agcaatggtgggatggtgaagggattcaaattcttccagaaggaccgtaagatggctcta
atccagatgggctctgtggaagaagccattcagtcactcatcgagctccataatcatgac
cttggtgagaatcaccacctgcgtgtgtccttctcaaagtccaccatttaa
DBGET
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