KEGG   Chrysemys picta (western painted turtle): 101947748
Entry
101947748         CDS       T04662                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
cpic  Chrysemys picta (western painted turtle)
Pathway
cpic03013  Nucleocytoplasmic transport
cpic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101947748 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101947748 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpic03019]
    101947748 (THOC6)
   03041 Spliceosome [BR:cpic03041]
    101947748 (THOC6)
Messenger RNA biogenesis [BR:cpic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101947748 (THOC6)
Spliceosome [BR:cpic03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101947748 (THOC6)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_Gbeta ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_SPT8 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_IP5PC_F Beta-prop_IFT122_1st Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_DCAF12 WDR54 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Tricorn_2nd
Other DBs
NCBI-GeneID: 101947748
NCBI-ProteinID: XP_005314427
LinkDB
Position
Unknown
AA seq 332 aa
MAPGEMDAQRALELLHMTVFSQSVSPCGKYLAAGNNYGEIAIFSLSAALSSEAKEESKKP
VVSFRAHDGPVYAMVSTDRQLLSSGNGEVRAWNWSDIVKKGCKEAWSRRPPYRSSLEVPE
INSLQLNPKDNSLLLAGGDCAVHAMDLESGAFTHEFRGHSDYVHCLALRDQSQECLSGSE
DGTVRMWDLRTGAQVQLIEVHKYEECSRPQHGKWIRCLATDCDWMVCGGGPALSLWHLRS
VTPTTVFPLPHCQQHVMFYQDLILSAGHSPAINHLQISGEIRAQIPCTPRSVHSLCVNER
SPEHKVLTASGSSHKVDVFTNFSYRAFSLCFA
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcacctggggagatggacgcccagcgtgcgctggagctgctgcacatgaccgtcttc
tcccagagcgtctcaccctgtggcaagtacctggcagcggggaacaactatggggagatc
gccatctttagcctctcggcggcactgagctccgaagccaaggaggagagcaagaagcca
gtggtgtccttcagagcccacgacgggccggtctacgccatggtctccaccgatcggcag
ctgctgagctccggcaacggcgaggtcagggcctggaactggagcgacatcgtcaagaag
ggatgcaaggaagcctggagccgcagacccccgtacaggagcagcctggaggtgcccgag
atcaatagcctgcagctgaaccccaaggataacagcctcctgctggccgggggcgactgt
gccgtgcacgccatggacctggagtctggcgccttcacccacgagttccgggggcacagt
gactacgtgcactgcctggcgctgcgggaccagtcccaggagtgtctgtcgggcagcgag
gacggcactgtgcgcatgtgggatctacgcaccggggcgcaggtccagctcatcgaagtg
cacaaatacgaggaatgcagccggccccagcacgggaagtggatccggtgcctggcgaca
gactgtgactggatggtgtgcggggggggcccggcgctctccctctggcacttgcgctcc
gtgacccccaccacggtcttccccctgccccactgccagcagcacgtcatgttctaccag
gacctgatcctctcggcagggcacagcccggccatcaaccacctgcagatcagtggggaa
atcagggctcagatcccctgcacgccccgctccgtccactcgctctgcgtcaacgagcgc
tcccctgagcacaaggtgctgacggcctccgggagcagccacaaagtcgacgtcttcacc
aacttcagctaccgggcgttttccctctgcttcgcatag

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