Chrysemys picta (western painted turtle): 101948078
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Entry
101948078 CDS
T04662
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101948078 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpic03400
]
101948078 (UIMC1)
DNA repair and recombination proteins [BR:
cpic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
101948078 (UIMC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
UIM
DciA_cyano_C
Motif
Other DBs
NCBI-GeneID:
101948078
NCBI-ProteinID:
XP_005282325
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All DBs
Position
8:complement(109744920..109810566)
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AA seq
814 aa
AA seq
DB search
MPRKKKHAESPDFQDPDGEEEEPRGLVDAKKKRSFVDAFIVISDSDGEQESKEENGLQKK
RTKQQLDRVKFAAKRKIAQMTEDEQFALALKMSEQEARQVNCREEEEEELVRKAIAESLN
SYQPSDSPTVTSASPPAQATCEPVQSHPAEIHGAVPPCPDSPRSECSSHSWSTKADGNGQ
TDVAKSPLVVLTRLSQEIVESSLLSSIIVSPGKSQPLTKSNEKPSSPARSHFRDTLPSPS
GEDLISLSPTFGRITPGAWQLTPRRLFSGSCSTSKAMGGEQDKQPLASTGSSAGEPTAGS
SAVLRKGRTWEPGGIPRKSCGAGGPECAPQRGHRGQGSVCAEHVERNEVPDNAPELCTLS
MADEKCKQEDARDTVHYYWGIPFCPKGVDPNQYTQVILCQLEVYQKSLKQAQRQLLQKKE
FGDPVVPCSSPLSQNEHGKGERISRENGVPDDTEDGRKEPESAAWLLATKNREPEQNPGQ
NLEEEKNSTSEEEPTTSYCQGPTCATDQTPAKASQALFAEDMPEDGEPMQITQSISALTP
FGSKRSPDIVTESPAEEEITVCPETQPNPSEAIEPEREELRSASKDAPLQAGGDEEAGNT
VSECSPSADDSVSCPLCDRGFPATEIELHAMCCNGIGGQDANEGVPALTQRRRETRSRAG
RGRDVPTPAALDKCEKCYLCKALVPLAEYPRHVDGCLQTARDAQGNRRLRSAKDVGRSDG
RLLSMLEMSECKSADAVAGAVLGAGGDPRSAGALHAPSGAEEEAGGSLARESPLPHMAFS
DLPSPSLVSAPEAAGYPGGFQQQNKGSRRRRRKF
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaagaagaagcatgcagaaagccctgactttcaggacccggacggggaggag
gaagagccgaggggcctggtcgacgccaaaaagaagcgtagttttgtggatgcctttatt
gttatatctgacagcgatggagagcaggagtcaaaggaggagaatggattacagaagaaa
agaaccaagcagcagctggatagagtgaagtttgccgctaaaagaaaaattgcacagatg
actgaagatgaacagtttgcactggctctgaaaatgagtgagcaggaagccagacaagtg
aactgccgggaagaggaagaagaggagcttgtgaggaaggccatcgccgagagccttaat
agctaccagccttcagattcccctactgtgacctctgcatcacctcctgcacaggcaaca
tgcgagccagtgcagagccacccggctgagatccatggagctgtgccaccttgccccgac
tccccacggtcggaatgcagctcccattcctggagcacaaaagctgatgggaatggacag
acggatgttgccaagagcccccttgtagtgctgacaaggttaagccaggaaatagttgaa
agctcactattatccagcatcatcgtctctccagggaagagccagcctttaaccaagtca
aatgaaaagccttcctcaccagcaagaagccatttcagggacacgttacccagcccttct
ggggaggacctgatctccctgagccccacctttggccggattactccaggcgcttggcaa
ctgacgcctcggagactgttttcagggtcgtgcagcacttcaaaagcaatgggtggggaa
caagacaagcaacctctggccagcactggaagctctgcgggagagcccacggctggcagc
tcagcagtgctccggaagggcaggacctgggagccaggtggcattccaaggaagagctgt
ggagcaggaggccctgagtgtgcaccacaacgtgggcaccgtgggcaaggctccgtttgt
gctgagcacgtggaacggaatgaggtgcctgacaacgcacccgagctttgtacactgagc
atggctgatgaaaagtgcaagcaggaagatgccagagacacagtgcactattactggggt
attccattctgccccaaaggggtggacccaaaccagtacactcaagtcatcttgtgccag
ctggaggtgtaccagaagagcctgaagcaggctcagaggcagctcttgcagaagaaggag
tttggtgatccagttgtgccctgctcttctcccctgagccagaatgagcatgggaaaggg
gagcgaataagcagggaaaatggtgttcccgacgacacagaagatggcaggaaggagcca
gagagtgctgcctggcttctcgccacaaagaacagggagcccgagcagaatccagggcag
aacttggaagaggaaaagaactctacgtccgaggaggaaccaaccaccagctattgccag
gggccaacctgtgcaacagaccagacaccagcaaaggcctcccaggcgctatttgcagag
gacatgcctgaagatggggaaccaatgcagattacacagagcatttctgccttgacccca
tttggcagtaagaggagcccagacattgtcacggagagccctgctgaagaagagatcaca
gtttgccctgagactcagccaaatccatcggaagctattgagccagagagagaagagctc
cgttcagccagcaaagatgcacctctgcaggcgggtggagatgaagaagctgggaacacc
gtctctgaatgcagcccgtcagctgatgacagtgtgtcgtgcccgctgtgtgatcgaggg
tttccagccaccgagattgagctgcacgccatgtgctgtaacggcatcgggggacaggat
gcaaacgaaggcgttccagcgctcactcagcgacggagagaaacaaggagtagagctggc
agaggcagagacgtcccgacacccgcagcccttgacaagtgtgagaagtgctacctttgt
aaggccctggtgccgctggcggagtatccgaggcacgtagacggctgcctgcagactgcg
agggacgctcagggaaaccggaggctgcgcagtgccaaggacgttgggaggagcgacggc
agactcctcagcatgctggagatgtccgaatgcaagtctgcagatgctgttgcgggggcc
gtgctgggagcaggaggagacccgaggtcggccggtgctttgcacgccccgtcgggggct
gaggaggaagccggcggcagcctggcccgggagagcccccttccacacatggctttcagt
gacttgcccagtccatccttggtgtccgctcccgaagccgcgggctacccggggggcttc
cagcagcagaacaagggcagccggaggaggaggaggaaattctga
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