Chrysemys picta (western painted turtle): 101948225
Help
Entry
101948225 CDS
T04662
Symbol
ARID1A
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101948225 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpic03000
]
101948225 (ARID1A)
03021 Transcription machinery [BR:
cpic03021
]
101948225 (ARID1A)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101948225 (ARID1A)
Transcription factors [BR:
cpic03000
]
Eukaryotic type
Helix-turn-helix
ARID
101948225 (ARID1A)
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101948225 (ARID1A)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101948225 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
101948225
NCBI-ProteinID:
XP_005302079
LinkDB
All DBs
Position
Unknown
AA seq
2275 aa
AA seq
DB search
MAAQVAPAAASSLGAPAPAELKKAEAQQRDCPPEEAGGEAVAERGGEKQAESEGPPGKEL
QDGAESNGGDAGAEPDLKSSNGNAGPRPAAAAATLNNNLPEPPGGGGGSSDGVGAPQQQQ
PPPPQQPPPSHPAALPPPAYGFGQPYGRGAQAAAVAAAAAAAFHQHGGQQSTGMAALQSG
GLEQPYPGPTGAPPGAAPPQNSHGGAEHGFPNHQYNSYYPAAAGRSAGAYPPPPQAYALS
SPRGSTQSPAQAAAGAKSPAAAAAFQQQRFGAMGPSAAGGAAGGGGATPQPTATPTLNQL
LTSPSSARGYQGYPGGDYSSGPQDGGAAAKGPAADMASQYGGGNSQAWATATGGGQQRSH
HAPMSPGSSSAGGGQPLARTQQPSSPMDQMGKMRPQPYGGSNPYTQQQGPQSGPQQGHGY
PGQPYGPQTPQRYSMGIQGRTQSAMGSISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPH
SQPQQPPYSQQPPSQTSHSQTSYQQQQTPSQPTQLPSSQPPYSQQQSQPPHQQSPSPYPQ
QQPAAQQHQQSQPPYSQQPSQSPYQQQQQTPQPASSALSQQSSSYPPSQPQQQQQSAYSQ
QRFPPPQELSQDSFGSQASSAPSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEG
ALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLS
PAAVPGNQMPPRPPSGHSDSIMHPSMNQSSIVQDRGYMQRNPQMPQYSSPQPGSALSPRQ
SSGGQMHAGMGAYQQNSLGSYGPQGGQYGPQGGYPRQPNYNAMPNANYPSPGMGSINPMG
AGSQMHGQTGVQPYTGLPPGRMSHAAIGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQE
AAAAAMHAAANSIQNRPPGYPNMNQGGMMGTGAPYGQGINSMAGMINPQGPPYPMSGNMA
NNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELG
GEPERKIWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRE
LATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSP
AGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSD
PTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNTGM
GDPYNRAAGPGMGNMALGQRQHYPYGGPYDRVRTEPGMGPEGSLGTGTPQANIMPSTPDS
GMYSPSRYPQQQQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTIYQQQQQNYKRPMDGNYG
PPAKRHEGEMYNVSYSTGQGQAQQQLPTAQTQQPSQQQTAQPYTCPAVENQYGSTYPATD
RRPAGGPQNQFPFQFGRDRVSAPPGSTAQQNMPPQMMGGPIQSTPEGLQQGTLWQGRNEI
GYSYPNRQSSGSAAQGPAYHGVNRTDEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPM
TRPPQPNYQTPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASH
IASAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTTKDIGTPEAWRVMMSLKSGLLAES
TWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQKTL
LDPERFCKSSSPPPEKGDEEEEPQSPNSEEEEEEEEEEAAFASKDKAPLESNEEKLVSKF
DKLPVKIVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKMELLLTH
KRASCNSALRKRSAAESNPGTREGENLPSDGPPEKRITATMDDMLSARPGSLAEEEVKNS
EATKESSKFPFGSSPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNIIRS
LSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWW
DCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFPTLGPNA
VLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKVYSTMVRFLSDRKNPVCREMAVVL
LANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLATTQFQQSQASLMHMQNPPFESTSVDM
MRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaggtcgcccccgccgccgccagcagcctgggcgccccggctccagccgag
ctgaagaaagcggaggcgcagcagcgggattgtcccccggaggaggcggggggcgaggcg
gtggcggagcgcggcggcgagaagcaggcggagagcgagggccccccggggaaggagctg
caggacggggccgagagcaacggaggggacgccggggccgagcccgacctgaagagctcg
aacgggaacgcgggccccaggcccgccgctgccgccgccaccctgaacaataacctcccg
gagccgcccggtggcggcggcggcagcagcgacggggtgggggcgccgcagcagcagcag
ccgccgccgccgcagcagcctcccccttcccacccggccgccttgcccccgccagcctac
ggcttcgggcagccctacggccggggagcccaggctgctgccgtcgctgccgccgccgcg
gctgccttccaccaacatggcggacaacaaagcactggcatggcagcgctgcagagcggg
ggcctggagcagccctacccgggaccgacgggggccccccccggggccgcccccccccag
aactcgcacggcggcgccgagcacggcttccccaaccaccagtacaactcttactacccg
gcggcagccgggcgcagcgccggcgcctacccgcctcccccccaggcctacgccctgagc
tccccccggggcagcacgcagagccccgcgcaagcggccgccggggccaaatcccccgcc
gccgccgccgccttccagcagcagcgcttcggggccatggggccctcggccgccggcggg
gcagcaggaggagggggcgccaccccgcagcccacagctacccccaccctcaaccagctg
cttacctcccccagctcagcccgtggctaccagggctaccccgggggcgactacagcagc
gggccccaggacgggggagccgccgccaagggcccggccgcggacatggcctcccagtac
ggtgggggcaatagccaggcctgggccacggccacaggagggggccaacaaaggagccac
catgcgcccatgagccccgggagcagcagcgctggagggggacagccgctcgctaggacc
cagcagccatcaagcccaatggatcagatggggaagatgagacctcagccatatggagga
agtaacccgtacacacagcagcagggacctcagtcgggaccacagcaaggacatggatat
ccagggcagccatatgggccacagactccccagagatattccatgggaattcaaggcagg
acgcagagtgcaatgggcagcatctcatatgcacagcagattcctccttatggacagcag
ggcccaagtgcctatggacagcagagccagactccatattacaaccagcaaagtcctcat
tcccagccacagcagcctccctactctcagcaaccaccatcccagacctctcactcccaa
acttcttatcaacagcagcagactccgtctcaacctacacagcttccgtcatcccagcct
ccatactcccagcagcagtcccaaccacctcatcagcagtccccatcaccgtatccccag
cagcagcccgcggcccagcaacatcaacagagtcagcctccgtactcccagcagccgtca
cagtcgccctaccagcagcagcaacaaacgccgcaacccgcctcttctgctctttctcag
cagtcgtcttcgtaccctccgtcacaaccgcagcaacagcagcagtccgcgtactcccag
caacgcttcccaccgccacaggagttatctcaagactcatttgggtcccaggcatcatct
gccccctcaatggcttccagtaaaggacaagaagatatgaacttgaatcttcagtcaagg
ccctccagcctgccggatctgtctggttcaatagatgatctacccatgggtacagaagga
gccctgagtcctggagtaagcacgtcagggatttcaagcagtcaaggagaacagagtaac
ccagctcagtctcctttctctccgcatacctcgcctcacctcccaggaatcagaggaccc
tccccttcccctgttggctctcctgctagtgttgctcagtcgcgttctggtccactctca
cctgctgcagtaccaggcaatcagatgccaccccgaccacctagtggccattcggacagt
atcatgcatccttccatgaatcagtcaagcatagtccaagatcgaggttacatgcagaga
aatcctcagatgccccagtacagctcccctcagcctggctccgccttatctccacgtcag
tcttctggaggacagatgcatgctgggatgggagcgtatcagcagaattcactgggaagc
tatggtccccaggggggtcagtatggtcctcaaggaggttatcccagacagccaaactat
aatgctatgcctaatgccaactaccccagcccaggaatgggaagtataaacccaatggga
gcagggagccagatgcatggtcagactggtgtgcaaccctatactgggcttcccccagga
aggatgagccatgcagccatagggaacaggccctatggacccaacatggcaaatatgcct
ccccaggtggggacagggatgtgcccaccaccaggtggcatgaaccggaaagcacaagaa
gcagctgctgctgccatgcatgctgccgccaactccatccagaacaggcctcctggctat
cccaacatgaaccaaggggggatgatgggaactggagctccttatggacaaggaattaac
agtatggctggcatgataaacccccagggtcctccatatcctatgagtgggaatatggcc
aacaactcggcagggatggcagcaagtcctgagatgatgggccttggggatgtaaaatta
acgcctgcaactaaaatgaacaataaggcagatgggacgccaaaaacagaatccaaatca
aagaaatccagttcctctactaccaccaatgagaagattaccaaattgtatgagctgggt
ggtgaaccggagaggaagatttgggtagatcgctacctagccttcactgaagagaaggca
atgggcatgaccaacctcccagctgtgggcaggaaacccctagacctttaccggctctat
atctctgtaaaggagattggaggactgactcaggtcaacaaaaacaagaaatggcgtgag
ttagcgaccaatcttaatgtgggcacctctagcagcgcagctagttctttgaagaagcag
tacatccaatgtctctatgcctttgagtgcaagattgaacgaggcgaagacccaccccca
gacatctttgcagctgctgattcaaagaagtcccagcccaagatacagcccccatctcca
gcgggttcaggctccatgcaggggcctcagacacctcaatccaccagcagctctatggca
gagggaggagatttgaaaccaccaacgccagcatctacgccacacagtcagatgccccct
ttgccaggcatcaggagtaactcagtaggtcttcaggatgcctttgcagatggcagtgac
cccacgttccagaagcggaactccatgactccaaatcccgggtaccagcccagcatgaat
acctctgacatgatgggtcgcatgtcctacgagccaaataaggatccttacagcagtatg
aggaaagctccaggaagtgaccccttcatgtcctcagggcagggccccaacactggtatg
ggtgacccgtataatcgtgctgcaggtccagggatgggtaacatggccctgggacaacgg
caacattatccctatggaggtccttacgacagagtgaggacggagccaggaatgggacca
gagggcagcttaggaaccggaactccccaggccaacattatgccttccacccctgactca
gggatgtactctcccagccgctatccacagcagcaacagcagcagcaacgacatgattcc
tatggcaatcagttctccactcaaggcacatcctctggcagtccctttcccagtcagcaa
accaccatctatcaacaacaacagcagaattacaagcgaccgatggatggcaattatggc
ccgcctgccaagcgacacgaaggggagatgtacaacgtctcgtacagcaccgggcagggg
caggcgcagcagcagctgcctacagcacagacccaacaaccgagccagcagcaaactgca
cagccttatacatgtcctgcggtggagaaccagtatgggagtacatatcctgccaccgac
cgccgacctgcaggagggccgcagaaccagttcccattccaatttggcagagacagggtc
tccgctcccccaggctcgactgcccagcagaatatgccaccccagatgatgggtggtcct
atacaatctactccagagggcctgcagcagggcaccttgtggcaagggcgcaatgaaata
gggtacagctatccaaatcggcagagttcaggctctgcagcccaggggcctgcttatcat
ggagtgaatcgaacagatgaaattctacattcagatcagagggtaaatcacgaggggcca
tggccctcccatgggaaccgtcagcctccttatggtccttctgccccggtacccccaatg
acaaggcccccacagcctaactaccagacccctcctagcatgcagaatcacattcctcag
gtatctagcccagcacctctgcccagacctctggagaaccgcacctcacccagcaaatct
ccgttcctgcactcggggatgaaaatgcagaaagcaggacctcccgtccctgcctcgcat
atagcctcagcagccgtacagcctcccatgatacgacgggacatcaccttcccacccgga
tcagtggaagctacgcagcctgtgttgaagcaaaggagacggctgacaacaaaagatatt
ggaactcctgaagcatggagagtgatgatgtctctgaagtctgggctgctggctgaaagt
acgtgggccttagataccataaacatcctgctctatgatgacaacagcataatgaccttc
aacctcagccagctgccagggttgctggaactgttggtggaatatttccggcgttgcctg
atcgaaatctttgggatcctaaaggaatatgaagtgggagatccgggacaaaaaacacta
ttagatcctgaaagattctgcaagtcttcaagtccccctcctgaaaagggggatgaagaa
gaggagccacagagccctaactctgaggaagaggaggaggaagaggaagaggaggctgca
tttgcaagtaaagacaaagcacccctagagagcaatgaagaaaaactagtcagtaaattt
gacaagcttccagtcaagatagtgcagaagaatgacccatttgtggtagattactcagac
aagctggggcgagtacaggagtttgaaagtggattgctgcactggcggattggtggtgga
gacaccactgaacacattcaaacccactttgagagcaaaatggagctactgttaactcac
aaacgagcttcctgcaactctgccttgagaaaacgttctgcagctgagagcaatccggga
actagagagggggagaatctgccatctgatggtcccccggagaaaaggataaccgctact
atggatgacatgctttcggcacggccaggctcactggcggaggaggaggtcaaaaactcg
gaagcaacaaaggaaagcagcaaatttccatttggcagtagtccagctcagagccacaga
aatatcaaaattctggaggatgaacctcacagtaaagatgagacacccctgtgcaccctt
ctagactggcaagactctctagctaaacgctgcgtctgtgtctctaacatcatcaggagt
ttatcgtttgtgccgggcaatgactttgaaatgtctaagcaccccggtctgctgctgatt
ctagggaaactgattctcctgcaccacaagcatccggaacgcaaacaggcaccactgacc
tacgagaaggaagaggagcaggaccaaggggtgagctgcaacaaggtggagtggtggtgg
gactgcttggagatgctgcgtgaaaacacgctggttacgctggccaacatttctggtcag
ttggacctctccccgtacccggaaagcatctgtttgcctgtcttggatggactcctccac
tgggcagtatgtccatccgcagaggcccaggatcctttcccaaccctggggcctaatgct
gtcctctcccctcagagactggttttggaaactctcagcaaactcagcatccaggataac
aacgtggatttgattcttgcaactcccccctttagtcgcttggagaaggtctacagcacc
atggtgcgcttccttagtgacagaaagaacccagtgtgtcgagagatggctgtggtacta
ctggccaacttggcacagggcgacagcctggcagctagagcaattgcagtgcagaagggc
agcattggcaacttgttgggcttcttggaggacagcctggcaaccactcagttccagcag
agtcaggccagcttgatgcacatgcaaaaccctccctttgagtcgacaagtgtggacatg
atgcgtcgggcagctcgggcgctgcttgccctggccaaagtggacgagaaccactctgag
ttcacgttatacgagtcgcggctgttggacatctccgtgtcgcctttgatgaactcgttg
gtttcacaagttatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
