Chrysemys picta (western painted turtle): 101948320
Help
Entry
101948320 CDS
T04662
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03015
mRNA surveillance pathway
cpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101948320 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
101948320 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101948320 (PABPC4)
03041 Spliceosome [BR:
cpic03041
]
101948320 (PABPC4)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101948320 (PABPC4)
mRNA cycle factors
Stress granule specific factors
101948320 (PABPC4)
Spliceosome [BR:
cpic03041
]
Complex C
Other components
Complex C specific factors
101948320 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
Motif
Other DBs
NCBI-GeneID:
101948320
NCBI-ProteinID:
XP_005302175
UniProt:
A0A8C3H584
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MNTAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEK
HEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRP
TYYSPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAGNAQASRSLPAA
AQRVGVATAAQNLAPRPPVTAPAPRAVPPYKYASTVRSPHPAVQPLQAPQPAVHVQGQEP
LTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLR
SKVEEAVAVLQAHQAKKEAAQKVGVVAATS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggctgctagtagctacccgatggcgtcattgtatgtgggcgacctgcaccct
gatgtcaccgaggccatgttatatgagaagttcagccctgctgggcctgtactctccatc
cgagtctgcagggatatgatcacccgtcgctccctgggatatgcctatgtcaacttccag
cagccagctgatgctgagcgtgctctagacaccatgaacttcgatgtgatcaaaggcaaa
cccatccgcattatgtggtctcagcgagacccctctctgaggaagtcgggggttgggaat
gtcttcatcaagaatctggacaaatccatagacaacaaggcactttatgacacattctca
gcatttgggaatatcttgtcctgcaaggtggtgtgtgatgagaatggctctaagggctac
gcatttgtgcactttgagacccaggatgctgcagacagagccatcgagaagatgaatggc
atgctgctaaacgaccgcaaagtatttgttgggagattcaagtcccgtaaggagcgggag
gctgagctgggagccaaagcaaaggagttcaccaatgtttatattaaaaattttggggat
gacatggatgatgagagactaaaggagctcttcagcaaatatggcaagacactgagcgtt
aaggtgatgacagatcccactggaaagtccaaaggctttgggttcgtgagcttcgaaaaa
catgaagatgccaacaaggcagtggaagaaatgaatggaaaggatattaatggaaaaatg
gtatttgtaggccgggcacagaagaaagtagagcgccaggcagagctgaaacggaagttt
gagcagctgaaacaagagagaatcagccggtaccagggtgttaatctgtacattaagaac
ctagatgacactattgatgatgaaaaactgaggaaggagttttcgccttttgggtctatt
acaagtgccaaggtgatgctggaggatggacgaagcaaagggtttggcttcgtctgcttt
tcctctccagaagaagctaccaaagccgtgactgagatgaatgggcgtatcgtgggctcc
aagccattgtatgttgcgctggcacagaggaaagaggagcgaaaggcccacctcactaat
cagtatatgcagcgcattgctggaatgagagccctgcctgcgaacacgatcattaaccag
ttccagccagctgctggggggtacttcatgcctgctgtgccccaggctcagagcagaccc
acttactattcacccaatcagatgacgcagatgagacctaacccacgctggcagcaaggg
gggagacctcaaggattccaaggaatgccgaatgccatgcgccagtccggaccgcgccca
gcactgcgccatctggctcctgctggcaatgctcaggcctctcgtagcctccctgctgct
gcccagagagttggcgtcgccacggcagctcagaatttagcccctcgtccgcctgtaact
gccccggctcccagagcagttcccccttataaatatgcctcaacggtccgcagcccacac
ccagcagtacagcctttgcaggcacctcagcctgcagtacatgtccagggacaggaacct
ttaactgcgtctatgctagctgctgcccctccccaggagcagaaacagatgctgggagaa
cgtttgttccccctgatccaagctatgcaccccagccttgcggggaagatcacaggaatg
ctactagagattgacaattcagagctactgcacatgctggagtctccagaatccctccgg
tcaaaggtggaggaggctgttgctgtgttgcaggctcaccaagccaagaaagaagctgcc
cagaaggtgggcgtggttgctgctacctcttaa
DBGET
integrated database retrieval system
