Chrysemys picta (western painted turtle): 101948611
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Entry
101948611 CDS
T04662
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpic03041
]
101948611 (YTHDC2)
Enzymes [BR:
cpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101948611 (YTHDC2)
Spliceosome [BR:
cpic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101948611 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
Helicase_C
OB_NTP_bind
DEAD
HA2_N
AAA_19
Ank_2
AAA_22
nSTAND3
Ank
ATPase
Ank_4
PhoH
AAA_7
AAA_23
AAA_16
AAA_29
SRP54
AAA_30
T2SSE
ABC_tran
ResIII
Motif
Other DBs
NCBI-GeneID:
101948611
NCBI-ProteinID:
XP_023962489
LinkDB
All DBs
Position
Unknown
AA seq
1316 aa
AA seq
DB search
MACSLTPNTKHAIRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGI
PQIPVKRGESEFDSFRQSLPVFEKQEEIVRIIKENKVVLIVGETGSGKTTQIPQFLLDDC
YKNGIPCRIFCTQPRRLAAIAVAERVAAERREKIGQTIGYQIRLESRVSPKTLLTFCTNG
VLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDILQKQTTLKLILSSAALDVN
LFIRYFGSCPVIHIQGRPYDVKEMFLEDTLRSTGYTNKEMVKYKKEKQREEKQQTTLTEW
YSAQDNTSKPESQRQRSVPSVSEEYDLLDDGGDTVFSQLTEKDVNCLEPWLIKEMDSCLS
DIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMIASGRGFLSQVEQLIGMGANVH
SKSSNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQANGGDLSTEDRELLKA
YHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNAH
RYQVFMLHSNMQTSDQKKVLKTTPPGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSF
DALNCVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQ
ELCLHTKLLAPINCPIADFLMKAPDPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLAD
LPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTF
SDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARG
GGDIRDVNTNSENWAVVKGALVAGMYPNLVHVDRENLVLTGPKEKRVRFHPTSVLSQPQY
KKIPPANGQAAAIQALPTDWLMYDEMTRAHRIANIRCCSSVTPVTVSLFCGPARLPSNAL
QEPSSFRVDGVPNDSSDSEIEDRTTANLAALKLDEWLHFKLDPEAASLLLQLRQKWHSLF
LRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWR
SNSSRKSSAETEFSDDSSNAEKVLMKSTSPAFHPPQKYKERGILHSKRSSDDRSDQSSVK
STDSSSYPSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLDISQQKGIWSTTP
SNERKLNRAFWESSMVYLVFSVQGSGHFQGFARMSSEIGREKSQDWGSTGLGGVFKVEWI
RKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWDRIPLGEKNTTD
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtagtttgacccccaatacaaaacatgctattaggagcctaattcagagattt
cctgtgaccaataaagaacgcactgaacttctaccaaaaacagaacgaggaaatgtgttt
gctgttgaagctgagaacagagaaatgagtaagacaagtgggcgacttaacaacggcatc
cctcagattcctgtgaaaaggggggaatctgaatttgattccttcaggcaatctctacca
gtttttgaaaaacaggaagaaattgtcagaattattaaagaaaataaagttgttctgatt
gtgggagaaactggatcaggaaaaactactcagattcctcaattccttcttgatgactgt
tacaaaaatggaattccatgtcgcatattttgcactcagccaagacgtttggcagctatt
gctgtggctgaaagggttgccgcagaaagaagagaaaagattggccagacaattggctat
cagatccgattagaaagcagggtttctccaaagacgctgctaacattttgcactaacggt
gtattacttcgtacgctaatggctggagacagcacgctatcgactgtgacacatgttatt
gtggatgaagtacatgagagggatcgattcagtgacttcttgctaacaaagttaagagac
atattgcaaaaacagacaactttgaaactgattctttctagtgctgccctggatgtaaat
ctctttatcagatattttggaagctgcccagtgatacacattcaaggaagaccatatgac
gttaaggagatgtttctggaagataccttacgaagtacaggatatacaaataaagagatg
gtaaaatataaaaaagaaaaacagcgagaggagaaacagcaaaccacccttacagaatgg
tattctgctcaagacaacactagcaaaccagaatctcaaagacagagatctgtcccaagt
gtgtctgaagagtatgacttgttggatgatggtggtgacacagtgttcagtcaattgact
gaaaaagatgtgaattgccttgaaccatggttaataaaagaaatggattcttgtctctcc
gatatatggttgcataaagatgttgatgcctttgctcaggtgtttcaccttatcttaact
gaaaatgtcagtgttgattacagacacagtgaaaccagtgcaactgcactaatgattgct
tcagggagaggtttcttaagtcaggtagaacagctgattggaatgggagcaaatgtccac
agcaaatcatccaatggctggatggctttggattgggctaaacattttggacagactgag
attgtagatcttctggaatcttacagtgcttcattagagtttggaaatctggatgaaagt
tctctagtgcaggcaaatggtggtgatcttagtacagaagacagagaactattgaaagct
tatcatcacagttttgatgatgaaaaagtggatctggatctgataatgcacctactttac
aacatctgtcatagttgtgatgctggagcagttttaatttttcttcctggatatgatgag
atagttggcttgagggatcgcattctgtttgatgacaagaggtttgctgataatgctcac
agatatcaagtttttatgctgcattcaaatatgcaaacatcagatcagaagaaggtgcta
aaaactacacctccgggcattcgcaaaataattctttctactaatattgcagaaaccagc
atcacagtcaatgatgttgtctttgttattgactctggcaagatgaaagagaagtccttt
gatgcgctgaactgtgttaccatgctaaaaatggtgtggatttcaaaagccagtgccatc
cagagaaaaggcagggctggacgctgtcggcctggaatctgtttccgactcttcagcagg
ctccgatttcagaatatgttggaatttcagactccagaacttctaagaatgccactacag
gaactttgtttgcacacaaaactgctagcaccaattaactgtccaattgctgactttttg
atgaaagccccagatcctccaccagccttaattgtgagaaatgctgttcagatgcttaag
acaatagatgccatggatacctgggaagatctcacggaacttggttatcatctggctgac
ttacctgtagagccacaccttggtaaaatggtgttgtgtgctgttgttttgaagtgcctg
gatcctattcttaccattgcttgcactcttgcatatcgagacccttttgtcctacctaca
caggcctcacaaaaacgtgcagccatgctgtgtagaaaacgttttactgcaggaacattt
agtgaccatatggcgcttctcagggcattccaggcatggcagaaggcacgaagtgatggt
tgggagagagccttctgtgagaagaattttctctctcaagctactatggaaatcatcata
ggaatgagaacacagttgcttggtcagctcagagcatcaggttttgttagagccagaggt
ggaggcgatattcgagatgttaacaccaattctgaaaattgggctgtagtgaaaggtgct
ttagtggctgggatgtatccaaatctagtgcatgtggatagagaaaaccttgtattgact
ggcccgaaggagaagagagtgcgatttcatcctacctctgttcttagccagcctcagtat
aaaaagattcctccagcaaatggtcaagctgcagcaattcaagcactccccacagactgg
cttatgtatgatgaaatgactagagcacacaggatagccaacatcagatgctgttcatct
gtgacgcctgtcactgtgtccctcttctgtggtccagctcggttgccaagtaatgcttta
caggagccctcatcctttagagtggatggtgttcctaatgatagtagtgatagcgagata
gaagacagaacaactgctaatctggctgcattgaagctagatgaatggctacatttcaaa
ctggatcctgaggctgccagtctgctgctgcaactcagacagaaatggcatagtttattt
ctgcgccgcatgcgagcaccttctaaaccttggtctcaagttgatgaagcaactataaga
gcaatcatagctgttttaagtactgaagagcagtctgcaggcttacagcaaccttcagga
attgggcaaagaccaagacctatgtcttctgaagaacttcccttagcatcttcttggaga
tcaaatagcagtagaaaaagctcagcagaaacagaattctctgatgactcttctaatgct
gaaaaagtcctaatgaaatctacatctccagcatttcacccgccacagaaatacaaagaa
agaggtattttgcattctaaacgaagttcagatgacaggtcagatcagtcatctgtgaaa
tccacagacagtagtagttatcccagcccatgtgccagtccttctcctccatcatctgga
aagggatccaagtctccttcacccagaccaaatatgccaattcggtacttcattatgaag
agcagcaacttgagaaaccttgatatttctcaacaaaaaggtatctggtctacaactcca
agtaatgagagaaaattaaatagagccttttgggaaagcagcatggtttacttggtattt
tcagttcaaggatcaggacattttcagggttttgctagaatgtcttcagagataggacgt
gagaaaagtcaggactggggctctacaggcttgggaggagtgtttaaggtggagtggatc
cggaaagaaagtcttccctttcagtttgcacaccacttactcaacccttggaatgataat
aagaaagtacaaataagcagagatggccaggaattggaaccacaggttggagaacaattg
ctacagctttgggatcgtattcctttaggagagaaaaacacaactgattga
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integrated database retrieval system
