Chrysemys picta (western painted turtle): 101948811
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Entry
101948811 CDS
T04662
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04510
Focal adhesion
cpic04512
ECM-receptor interaction
cpic04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101948811 (TNR)
04518 Integrin signaling
101948811 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101948811 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpic00536
]
101948811 (TNR)
Glycosaminoglycan binding proteins [BR:
cpic00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101948811 (TNR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Teneurin
EGF_TEN
FN3_DSCAM-DSCAML_C
EGF_Tenascin
Fn3_PBP1
Pur_ac_phosph_N
Fn3_Dep-1_3rd
Fn3_ROS1
Fn3_VIN3
FN3_Tor_3rd
EGF_2
DUF7949
TMF_TATA_bd
EGF
DUF1192
TSC22
Motif
Other DBs
NCBI-GeneID:
101948811
NCBI-ProteinID:
XP_005304276
UniProt:
A0A8C3HLX9
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All DBs
Position
8:59867314..60160465
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AA seq
1356 aa
AA seq
DB search
MGADGANLVLRNMLIGLNLLLLGSVLKPFECRLEVTTERMRRQVVDEEGNFANYSPPIKE
QSMVFNHVYNINIPLDSFCSSALEASSDQEVSSEDDRMTEYTEQTSDSESQVTFTHRINL
PKQACKCFTSAQVMQELQSRIEMLEREVSMLRDQCNSNCCQENAATGQLDYIPHCSGHGN
FSLEACGCICNEGWAGKNCSEPHCPMGCSSRGICIEGQCICDNDYSGDDCSELRCPTDCS
SRGLCMDGECVCEEGYAGEDCSELRCPDDCSGKGRCANGTCVCQEGYVGEDCSQLRCLNA
CSGRGFCQEGMCACEEGYKGQDCSAVAPPEDLRVAGISDRSIDLEWDGPMAVTEYVISYQ
PVVPGSLQLQQRVPGDWSAVTIKELEPSQTYNISIYAVISDILSVPVTTKVTTHLSTPQG
LQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSSVTTFNQTGLKPGEEY
IVNVVALKEQARSPPTSDSISTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDYILLKYGL
VNGEGGKTMFRLQPPLSQYSMQALRPGSQYEVSISGVRGTNESDPAVTTFTTEIDAPKNL
RVGLRTLASLELEWDNSEAEVQNYRVVYSTLAGEQYHEVLVPRNAGLTTRATLTDLVPGT
EYGIGISAIMDSKQSVPATMNARTELDSPQNLVVTASTDTSISLAWTQAKGPIDHYRITF
TPASGMASEVTAPKDKSELTLSDLDPGTEYTISVIAERGRQQSLESTVDAFTGFRPITQL
HFSHVTSSSLNITWSDPSPPADRFILNYNPRDKEETKQVTLDATKRHATLSGLQPSTEYI
VSLVAVHGLVSSEPIVGSITTGIDPPKNLTVGNVTKDSVMIFWAPPITTFDHYRVSYRSA
QGRADSTAVANDVAEYNLSRLQPATKYEISLSSVRGREESERVSSIVYTAMDHPLGLTAT
NVTPTEALLQWNPPLSEVENYVIVLTHYTVAGETILVDGANQEYQLINLMPSTSYMVTMY
ATNGPLTSSTISTNFTTLLDPPTNLTATEVTRRSALLSWQPPMAEIENYIMTYRSTDGSR
KELIVDAEDTWIRLEGLSETTEYTVRLQAAQDAMRSGFTSTSFITGGRVFANPQDCAQHL
MNGDTMSGIYTISINGDLSQRVQVYCDMTTDGGGWIVFQRRQNGLTDFFRKWMDYRVGFG
NLEDEFWLGLDNIQKITSQGRYELRIDMRDGQEATYAYYDKFSLGDARSLYKLRIGDYNG
TSGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGIN
WFHWKGHEFSIPFVEMKMRPYNHRNVSGRKRRSLQL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgacggtgcaaacttagtcctgaggaacatgcttatcggtctcaacttgctc
ctgctgggatcagtcctcaagccctttgagtgccggctagaggtgacaacagagaggatg
aggaggcaggtagtggacgaggaaggcaactttgccaactacagcccgcctatcaaggag
caatccatggtcttcaaccatgtatacaacattaacatccccctggacagcttctgctca
tcagcactcgaggcgtcatctgaccaggaggtgagttcagaagacgacaggatgacggaa
tatacggagcagacctcagacagcgagagccaggtcaccttcacccacaggattaacctc
cccaagcaggcttgcaagtgcttcacctctgcccaggtcatgcaggagcttcagagcaga
attgagatgctggagagggaggtgtccatgctacgggaccaatgcaactccaactgctgc
caagaaaatgcagctacagggcagctagattacatcccccactgcagcggacacggtaac
tttagcctggaggcctgtggctgcatctgcaatgaagggtgggctggaaaaaactgctca
gagccccactgccccatgggctgttccagccggggcatctgcatagaaggccagtgcatc
tgtgacaacgactacagtggggacgattgctcagagctccgctgcccaacagactgtagc
tcccgaggcctctgcatggatggggagtgcgtctgcgaagaaggttacgcaggggaagac
tgcagcgagctgaggtgccccgatgactgctcgggaaaggggagatgcgccaatggcacc
tgcgtctgtcaagagggctacgtgggggaagactgcagtcagctgaggtgcctgaatgcc
tgcagtggacgtgggttctgccaggaggggatgtgcgcttgtgaggaaggttacaaggga
caggactgctcagcagttgccccacccgaggatctgcgagtggctgggatcagcgacagg
tccattgacctggaatgggatgggccgatggcagtgacagaatatgtgatctcctaccag
ccagtggtgccggggagccttcagctccagcaacgggtgcctggggactggagcgctgtc
actattaaggagctggagccgagccaaacatataacatcagcatctacgctgtcatcagc
gacatccttagcgtccccgttactaccaaggtgactacccatctctccactccacaaggg
ctgcagttcaagacgatcacagagaccaccgtggaggtgcagtgggagcccttctctttc
tcttttgacggctgggagatcagcttcatccccaagaacaacgaaggtggcgtcatcgca
cagcttcctagcagtgtcaccactttcaaccagacaggactgaagcctggggaagaatac
atcgtcaatgtggtagccctcaaggagcaagccaggagccctccaacctccgacagcatc
tccaccttaattgatgggccaacccaaatcctggtgcgagacgtctcagacacggtggcc
ttcgtggagtggaccccgccccgagctaaagtagactacatcctgctgaagtatggcctg
gtgaatggggaaggggggaagaccatgttccgactgcagcctcccctgagccagtactcg
atgcaggccctgaggcccggctcgcagtatgaagtctctatctctggggtccgagggacc
aacgagagtgaccctgctgtcactaccttcacaacagagatcgatgcacccaagaacctc
cgggtgggcttgcgaacattggccagcctggaactggagtgggacaacagtgaggcggag
gtgcagaactacagggtggtgtatagcacgctagcaggcgagcagtaccacgaggtgctg
gtgccgcggaacgctggcctgacaacccgggccaccctcacagatctggtgccaggaact
gaatatggaattgggatatcagccatcatggatagcaagcagagcgtcccagccaccatg
aacgcaaggaccgagcttgacagccctcagaacctcgtggtgacagcctccacggacacg
tctatctccctggcctggacccaggccaagggccccatagaccattaccgcatcaccttc
actccagcctctggaatggcctccgaggtgacagcacccaaggataagtctgagctgaca
ctctcagacctggatcccggtacagaatataccatctcagtcattgccgagagaggccgt
cagcagagtttggagtccacagtggatgcattcacagggttccgaccaatcacacagctg
cacttttctcatgtgacttcctccagcctcaacatcacctggagtgacccctctcctccg
gcagacaggtttatcttgaactacaatcccagagataaggaggagaccaagcaggtcaca
ctagatgccaccaagagacacgccaccctgtctggcttgcagccatctacggagtatatc
gtgtcactggtggctgtgcatggtttggtcagctccgagcccatagtgggctccatcaca
acagggatcgaccccccgaagaacctcactgtgggcaatgtaaccaaggactcagtgatg
atcttctgggcccctcctatcacaacttttgaccactacagagtgtcctaccgatctgca
caaggaagagcggacagcacggcagtcgccaatgacgtcgctgaatacaacctcagccgc
ctgcagccagcgaccaagtacgagatcagcctgagcagtgtgcggggccgggaggagagc
gagcgggtctccagcatcgtgtatacagccatggaccaccctctgggtctgactgccacc
aatgtcaccccaacagaagccctgctgcagtggaacccgcctctttccgaagtcgagaac
tacgtcattgtgctaacgcactacacggttgcaggggagaccattctagtggacggtgcc
aaccaagaataccagctgatcaacctgatgcccagtaccagctacatggtcaccatgtat
gccaccaatgggcctctcactagcagcaccatcagcaccaactttacgactcttctggat
cccccgactaacttgactgccactgaggtcacccgccggagcgccctcctttcatggcaa
cctccaatggcagagatcgagaactacatcatgacctatagatcgactgatggaagccga
aaggagctgatagtcgatgctgaggacacctggatccgcctagaggggctttcggagacc
acggaatacaccgtacgcttgcaggcagcccaggatgcgatgaggagtggattcacctcc
accagcttcatcacaggaggccgcgtgttcgctaatcctcaggactgtgcccagcatttg
atgaatggcgacaccatgagtggaatctacaccatctccatcaatggggacctcagccag
cgagtgcaggtgtactgcgacatgaccacggatgggggaggatggattgtgttccagaga
cggcagaatgggctgacggatttctttcgaaagtggatggattaccgggttggctttgga
aacctagaggatgagttttggctgggcctggataacattcagaagatcacatcgcaggga
cgctacgagctacgaatagacatgcgagatggccaagaggcaacttacgcctattacgac
aagttctccctcggtgacgccaggagtctgtacaagctccggataggagactacaatggc
acttccggagattcactcacctatcaccagggacgtccgttctccaccaaggacagagac
aatgacgttgctgttacaaactgcgccatgtcatacaaaggggcctggtggtataagaac
tgccaccggaccaacctcaacggcaagtacggcgagtcccggcacagtcaggggattaac
tggttccactggaaaggccacgagttctccataccctttgtggaaatgaagatgcgaccc
tacaaccaccgtaatgtctcgggaaggaaacgacggtccctacagctgtga
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