Chrysemys picta (western painted turtle): 101949007
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Entry
101949007 CDS
T04662
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpic01002
]
101949007 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpic04121
]
101949007 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpic04147
]
101949007 (USP13)
Enzymes [BR:
cpic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101949007 (USP13)
Peptidases and inhibitors [BR:
cpic01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101949007 (USP13)
Ubiquitin system [BR:
cpic04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101949007 (USP13)
Exosome [BR:
cpic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101949007 (USP13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
101949007
NCBI-ProteinID:
XP_008168892
UniProt:
A0A8C3IUR7
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All DBs
Position
9:89536565..89625237
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AA seq
862 aa
AA seq
DB search
MQRAALFGSGRDAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYESPDSEGGLYV
CMNTFLGFGREHVERHYRKTGQCVYMHLKRHVIEKVPGASGGALPKRRNAMLFLDLETNG
DLNNDDFEYEDEAKLVIFPDHYEIPLPNIEELPALVTIACDAVLSSKSPYRKQDPDSWEE
ELQVSKHAKTLVQMDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGH
ALEHYKEMGYPLAVKLGTITPDGADVYSFDEEEAVLDPHIAKHLAHFGIDMLQMHVTENG
LRDNNIKPRVSEWEVIQESGVKLKPMYGPGYTGMKNLGNSCYLSAVLQAIFSIPEFQRAY
VGNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQHNGI
SPRMFKAFVSKGHPEFSSNRQQDAQEFFLHLINLVERNRIGSENPSDVFRFLVEERTQCC
QSRKVRYTERVDYLMQLPVAMEAATNKDELIAYELKRREAEAARRPLPELIRAKIPFSAC
LQAFSEPENVDDFWSSALQAKSAGVKTSRFSSFPEYLVVQIKKFTFGLDWIPQKLDVSVD
MPDLLDINHLRATGLQPGEEELPDIAPPIIIPDDPKDRMMNHFMEPPDIDESSVMQLAEM
GFPLEACRKAVYYTGNMGAEVAFNWIIAHMEEPDFAEPLAIPGYGGVASAGAAGLGAIGL
DNQPPEEMVALITSMGFQRNVAIQALKATNNNFEHALDWIFSHPEPEEESESASDVMDME
NNANANILAEAGSEGPRIKDGSGRYELFGFISHMGTSTMSGHYVSHLKKEGRWVIYNDLK
VCASERPPRDLGYIYFYRRIPS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggccgcgctgttcgggagcggcagggatgcgcagatggctgcgggggacctg
ggggagctgctggtcccctacatgcccacgatccgcgtgcccaagtcaggggaccgggtc
tacaagacggaatgtgccttctcctacgagtccccggattcagaaggaggtctctatgtg
tgcatgaacacgtttctgggatttggaagggaacacgttgaaaggcactatcgaaaaaca
ggacagtgtgtatatatgcatctgaaacgacatgtgatagagaaggtaccaggtgcatct
ggtggagctttaccaaaaaggaggaacgcaatgctatttttagatctagaaacaaatggc
gatttaaacaatgatgattttgagtatgaagatgaagccaaactcgttatatttccagat
cactatgaaattccattaccaaatatagaggagttgccagcactggtaacaatagcttgt
gacgcagtcctcagttcaaaatctccctaccgaaagcaggacccggactcgtgggaagaa
gagctacaagtatccaaacacgccaaaacccttgtacagatggacaacggtgttaggatt
ccccccagtggctggaagtgctcgaagtgtgacctgcgggagaacctctggctgaacctg
acggatggctcggtgctgtgcgggaaatggttcttcgatggcagtgggggaaacggacat
gcactggaacactacaaagagatgggctatcccttagcagtgaagctgggaaccatcact
cccgatggtgcagatgtctattcttttgatgaagaggaggcagttttagatccacatata
gcaaaacacttggcgcactttgggattgatatgctccagatgcatgtgacagagaacggc
ctaagagataacaacataaaaccaagagtctctgagtgggaagtgattcaggaatctggt
gtgaagctaaagcccatgtatggcccaggatacactggcatgaagaacttgggaaatagc
tgctacctcagtgctgtcctgcaggccattttcagcatcccagagtttcagcgagcgtat
gtgggaaaccttccgagaatattcgactattcccctctagatccaacacaagatttcaac
acgcagatggctaaattaggacacggcctcctttcgggccagtactctaaaccaccaatg
aaatctgagcttattgaacaggtgatgaaggaagaacacaagcctcaacacaatggaatt
tctcctcgaatgtttaaggcctttgtaagcaaagggcacccagaattctcctccaataga
cagcaagatgcacaggagtttttcctgcaccttataaacctagtagagagaaaccgcatt
ggctcagaaaacccaagtgatgttttccggttcctggtggaagaacgcacacagtgctgc
cagtctaggaaagtccgatacacagaaagggtagactatctcatgcagttacctgtggcc
atggaggcagcaacgaacaaagatgaattaattgcctacgaactgaagaggagagaagca
gaagctgctaggagacctctgccagagctcatccgtgccaagatcccatttagtgcgtgt
ctgcaggccttttctgaaccagaaaacgtagacgacttctggagcagtgcccttcaagca
aaatctgcaggagttaaaacatctcgcttttcttcatttcctgagtatctggtagtgcag
ataaagaagttcacctttggccttgactggataccccaaaagcttgatgtttccgtagac
atgccagacctactagacatcaatcatctccgtgccacgggactacaaccaggagaagag
gaacttcccgacattgctccacccattatcattcctgatgaccccaaagatcgcatgatg
aaccatttcatggagcctccggatattgatgaatcttcagtgatgcagctagcagagatg
ggtttccccttggaagcctgtcggaaagctgtatactatacaggaaacatgggtgctgaa
gtggctttcaactggatcattgcacacatggaagaaccggattttgcagagccattagct
atacctggctatgggggagttgcttctgccggagcagctggtctaggggctattgggtta
gataaccagcctccagaagagatggtagctctcatcacctccatgggattccagaggaat
gtagctattcaagcactcaaagcaacaaataataattttgagcatgcactggactggatc
ttcagccaccctgagcccgaagaggaaagcgagtctgcttcagatgtgatggatatggaa
aataatgctaatgccaacatcctggcagaagcaggttcagaggggcccaggatcaaagat
gggtctggaaggtatgaactctttggattcatcagccacatgggaacatccacaatgagt
ggccactatgtttcccacctcaaaaaggaaggaagatgggtgatctacaacgaccttaaa
gtctgtgcctcagaacgacctcccagagacctgggctatatttacttctaccgtaggata
ccaagttag
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