Chrysemys picta (western painted turtle): 101949216
Help
Entry
101949216 CDS
T04662
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03013
Nucleocytoplasmic transport
cpic03015
mRNA surveillance pathway
cpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101949216 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
101949216 (EIF4A3)
03015 mRNA surveillance pathway
101949216 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101949216 (EIF4A3)
03041 Spliceosome [BR:
cpic03041
]
101949216 (EIF4A3)
03009 Ribosome biogenesis [BR:
cpic03009
]
101949216 (EIF4A3)
03012 Translation factors [BR:
cpic03012
]
101949216 (EIF4A3)
Enzymes [BR:
cpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101949216 (EIF4A3)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101949216 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
101949216 (EIF4A3)
Spliceosome [BR:
cpic03041
]
Complex C
Other components
EJC/TREX
101949216 (EIF4A3)
Ribosome biogenesis [BR:
cpic03009
]
Eukaryotic type
90S particles
Helicases
101949216 (EIF4A3)
Translation factors [BR:
cpic03012
]
Eukaryotic type
Initiation factors
eIF-4
101949216 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
101949216
NCBI-ProteinID:
XP_008165286
LinkDB
All DBs
Position
19:complement(1171713..1183612)
Genome browser
AA seq
336 aa
AA seq
DB search
MVSLSRSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNV
QCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNK
GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFF
VAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKE
RESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKG
VAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggtctctctttccaggtcacaatctggaacaggcaaaacagcaacattttgcatctct
gttctacagtgtttggatattcaggtccgtgaaacccaggcattgatcttagcaccaact
agggagttggcagtacagattcaaaagggccttcttgctcttggtgactacatgaatgtg
cagtgtcatgcctgtattggaggcacaaatgttggtgaagatatccggaaactggattat
ggacagcacgttgttgctggcacaccaggccgtgtgtttgatatgattcgtcgtcgaagt
ttaaggactcgtgccatcaaaatgttggttttggatgaagctgatgagatgctcaataaa
ggttttaaagaacagatttatgatgtgtacagatacctgcccccagctactcaggtggtt
ctgatcagtgctaccttgcctcacgaaatcctggagatgaccaataaattcatgactgac
ccaatccgcatcttggttaaacgtgatgaattgactctggaaggaatcaaacagtttttt
gtggccgtggaaagggaagaatggaagtttgatacgctgtgcgatctgtacgacacactc
actatcacgcaggctgtcatcttctgtaacaccaagaggaaggtagactggctaacagag
aagatgagagaagccaacttcacggtgtcatcaatgcatggtgatatgccacagaaggag
agagaatccatcatgaaagagttcagatcgggggcaagccgtgtgcttatttctacagat
gtttgggccaggggcttggatgttcctcaggtgtccctgatcattaactacgacttgccc
aacaaccgagaactgtatatacacagaattggtagatcaggtcggtatggccgaaaaggt
gttgccatcaactttgtaaagaatgacgacatccgtatcctgcgtgatattgaacagtac
tactctacccagattgatgagatgcccatgaatgttgctgatcttatttaa
DBGET
integrated database retrieval system
