Chrysemys picta (western painted turtle): 101949846
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Entry
101949846 CDS
T04662
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03013
Nucleocytoplasmic transport
cpic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101949846 (CASC3)
03015 mRNA surveillance pathway
101949846 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101949846 (CASC3)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101949846 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
101949846
NCBI-ProteinID:
XP_005294182
UniProt:
A0A8C3FBP3
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MADRRRQRASQDSEDESDSAASDSVDSPAGPVRSGSPASPPRPARSVAGTLPAGGRVRGP
ESAAGAAKSPQESECESEDGIEGDAVLSDYESAEDSEAEEGEYSEEESSKVELKQESNNG
SESTGKAEKGEEKPDPKGAVTGERQSGDGQESTEPAENKVGKKVPKHLDDDEDRKNPAYI
PRKGLFFEHDLRGQAQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGY
DIRSAHNPDDIKPRRMRKPRFGSPPQREPNWANERQNKPPRPQGSDSDPLPTRTFISRNS
TGMGRMPPARNFPRMGGYKENRPSYRAVEANSQHLSRTGEQAKHESSYRARRVEQAPERD
PSPEAEIAHVHSSPVKKEEIVLESQTPSTDSVQPPPDRPIEKKSYSRARRTRNKVGDAGK
LADEVPPPEGLTPVPPKPVPVVTPPPPAKAGSWETPVESSVDGLEQDMTQLNLTEQTWTQ
GQPPFIQPRELRGIPNHMHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPPVPEPAPPM
HISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLANPG
LYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPSYPYPPGALPPPPPPHLYPNTQAQA
QVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPELLVAGCKQGSS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggcggcggcagcgggcctcccaggacagcgaggacgagtccgactcggcc
gcctccgacagcgtcgattccccggccggcccggtccgctccggctcccccgcctcgccc
ccgcgaccggcccggagcgtcgccgggaccctgcccgccgggggccgggttcgcgggccc
gagagcgcggccggggccgccaagagcccgcaggagtccgagtgtgaaagtgaagatggc
atcgaaggagatgctgttctgtcggattacgaaagtgcagaagactccgaggccgaggaa
ggggagtacagcgaggaggaaagctcaaaggtggagctgaagcaggagagtaacaatggc
agtgaatccacaggaaaagcagagaaaggggaagagaaacctgacccgaaaggtgctgtg
actggcgagaggcaaagcggggatgggcaggagagcactgaaccggctgagaataaagtt
gggaaaaaggtccccaagcacttggatgacgacgaggatcggaagaaccctgcgtacata
ccccgcaaagggctcttctttgaacatgatctccgaggacaggcccaggaggaggaagtc
aggccgaagggtcgtcagcgaaagctttggaaagatgagggccgctgggaacatgacaaa
ttccgggaagacgagcaagcccccaaaagcaggcaggagctgattgcgctctacggctat
gacatccggtcggctcacaatcccgacgacatcaagccgaggaggatgcgcaaaccacgg
tttgggagccctccgcagcgagagccgaactgggccaacgagaggcaaaacaagccacca
agaccccagggctctgatagcgatccgctgccgacacgaaccttcatcagccggaactcc
acgggcatgggtaggatgcccccagccaggaactttccaaggatgggtggctacaaagag
aaccgtccaagctaccgagctgtggaagcaaacagccagcacctctctcgaacaggggag
caggctaaacacgaaagcagttaccgggcaaggcgtgttgaacaagccccggagagagac
ccctctcctgaagctgagattgcgcatgttcacagcagccctgtcaagaaggaagagatc
gttttggaaagtcagaccccaagtacagactctgtacagccaccaccagatagacccatc
gaaaagaaatcctactcccgggcaaggaggaccaggaataaagttggcgatgcaggaaag
ctggcagatgaagtcccgcctccagaaggattgacgcccgtgcctccgaaaccagtgccg
gtagtgacgccccctccgcctgcaaaggccggtagttgggagacaccagtagaatccagc
gtggatggactcgaacaagacatgactcagttgaatctaaccgagcagacctggacccaa
ggacagcctccgttcatacagcctcgggaacttcggggtattcctaatcatatgcacatg
ggagctggaccaccacctcagtttaacaggatggaggaaatgggagtacaggggggccgg
gcaaagcgttactcatcccagcgtcagcggccaccagttccagagcctgctccccccatg
cacatcagcatcatggaagggcactattatgatccactacaattccagggaccaatctac
acacacagcgagaatcctgccccgttgcccccccagggtatgattgtacagccagaaatg
catctcccacatccaggtttacatccacaccagacaccggcacctttggctaaccctggc
ttatatcctccaccagtctccatgcctcctgggcagccacccccgcagcagctgctcgca
cccacctatttctctcctcccggagtcatgaactttgggaatcccagctacccctatccc
ccaggagcactcccaccaccacctcctccccatctgtatcccaacacacaggcccaggcc
caggtgtacggaggggtcacctactacaacactgtccagcagcaagtacagccgaaacct
tcaccaccacgaagaacatcccagcccgtgactatcaagccaccgcctcccgagcttctc
gttgcaggttgtaagcagggctccagttaa
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