Chrysemys picta (western painted turtle): 101950117
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Entry
101950117 CDS
T04662
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101950117 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101950117 (EXOSC10)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
101950117 (EXOSC10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
DUF4230
Motif
Other DBs
NCBI-GeneID:
101950117
NCBI-ProteinID:
XP_005292891
UniProt:
A0A8C3IDU9
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Position
24:complement(6270173..6296625)
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AA seq
902 aa
AA seq
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MAAAGGLGSRSAAVQTGQIMDTGSGGATEELPGGCSDTVLPGFRDADSFVKHALGTVVAA
TKASNGLPQPGDEYDFYRSFPGFRAYCETQGDRLLHCMSKVMQYHGCRSHIKDRSKATEL
EDKFDLLVDSNDVILERVGILLDEAAGVNKNQQPILPAGMQLPKTIVSSWNRKSGESHRT
KSETFRLLHAKNITRPQLKFREKIDNSNTPFVPKLFVKPNALKPLPEALAKSRRERKERP
EDLDVPAALADFLHQQRTQQTEQDMFAHPYQYELEHFVPPDEALEKPQLQMYRPVEDTPC
HFISTLDELVELNEKLVSCKEFAVDLEHHSYRSFLGLTCLMQISTRMEDFIIDTLELRSD
MYILNEAFTDPAIVKVLHGADSDVEWLQKDFGLYLVNMFDTHQAARLLNLGRHSLDHLLK
LYCHVETDKRYQLADWRIRPLPEEMIQYARDDTHYLLYIYDKVREALWERGNGQPTQLQV
VWQRSKDICLKKYIKPIFSEDTYLELYRRQKKHLNTQQLTAFKLLFAWRDKMARQEDEST
GYVLPNHMLLKIAEELPKEPQGIIACCNPIPPLVRQQINEMHLLIQQAREMPLLKSETAT
AVKKKGSLPNPEKLENHLFGPHDNSRVPLDDIQNLSVLEPAPVLECGSLFSDSEGEMDGT
RILPNSTCLVATATISIFSEPDVDEGNEKNLTVAQQKAQRIMESFENPFRMYLPSEQNPA
HISQSAKFDPSSKIYEISNRWKLMSQAQLQKEAKEEAKKKAVQQRAAREQVQKECKATAE
NIVSVRQQAVQEQASKKRERITSEPGTETPKQEKKRPKASQQPEEQEMPKQFTPFDYSKS
NFKVFAGNSKSKQSSQFDPAKQAHTGKKFSGANKLQHPAGNKSMSYLAGKSDRGSRHSWP
KR
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccggcggactggggagtcgtagcgcagcagttcagacgggccagataatg
gacacggggagtggcggcgccaccgaggagctgccggggggctgctcagacaccgtgtta
ccggggttcagggatgccgactccttcgtcaagcatgcacttggcactgtggtggctgct
actaaggcatctaatgggctccctcagcctggagatgaatatgacttctatcgcagtttt
cctggattccgggcatactgtgaaacgcaaggtgacaggctgcttcactgtatgagcaag
gtgatgcagtatcatggctgtcgcagtcacatcaaggatcgcagcaaagcaacagagctg
gaagataaatttgatttgctggttgactccaatgatgtcattcttgaaagagtgggtatt
ttactggatgaagcagcaggagtgaacaagaaccagcagcctatcctccctgcagggatg
cagctcccaaagacaattgtttccagctggaaccgtaagagtggagaatcccacagaaca
aagtctgaaaccttccgattgctacatgccaagaatatcactcgaccacagctcaaattt
cgagagaagattgacaattccaacactccctttgtacctaagctttttgtcaaacccaac
gctctgaaaccgctgcctgaagcactcgcaaaaagcaggcgggagcgaaaggagcgtcct
gaggacttggatgtaccggctgctctagccgatttcctccatcaacagagaactcagcag
actgaacaagacatgtttgctcatccttaccagtatgaactggagcactttgttccacca
gatgaagctctcgagaaaccacaactccagatgtacaggcctgttgaggacacaccctgc
cattttatctccaccctggatgagttggtagaactgaacgaaaagcttgtaagctgcaaa
gaatttgctgtggatttggagcaccattcctataggagtttcctgggcttgacatgtctg
atgcagatttccacccggatggaagatttcattattgacactctggagctacgtagtgac
atgtatattttgaatgaggccttcacggaccctgctattgtgaaggtccttcatggtgcc
gactcagatgtggagtggctacagaaagatttcggtctgtacttagtgaacatgtttgat
actcaccaggctgcccgtctcctcaaccttggcaggcactccctggaccacctgctaaaa
ctctattgccatgtggaaactgacaagcggtatcagctggctgactggaggattcgccct
ttgccagaggaaatgatccagtacgcccgagacgacactcactacctgctctacatttat
gataaagtgagagaggcactatgggagagaggaaatggacagcccactcagctgcaggtg
gtgtggcagcgcagcaaggacatctgcctgaagaaatacatcaaacccatcttctcagag
gacacctatcttgagctctacaggaggcagaaaaagcatctcaacacgcagcagctaaca
gcttttaaattgctatttgcctggagggacaagatggcacgccaagaggatgagagtaca
gggtatgtgctaccaaaccatatgctactgaagatagcagaggagctgcccaaagaaccc
cagggcatcattgcttgctgcaacccgatcccaccactagtccgccaacagatcaacgaa
atgcatctcctcatccaacaggcccgagagatgcctctgctcaagtctgaaactgcaaca
gcggtgaagaagaaagggtctctacccaacccagagaagctggagaatcatttgtttgga
cctcatgacaattcacgcgttcctctggatgatattcagaacctctcagtcttagaacct
gcaccagttctggaatgcgggagcctcttttcggacagcgagggggagatggacggcaca
aggatattacccaattccacatgtcttgttgctacagccactatcagtatattcagtgag
cctgatgtggatgaagggaatgagaagaacttaacagttgcacagcagaaggctcagcgc
ataatggagtcctttgaaaatccgtttagaatgtatctgccctcagaacagaatcctgcc
cacatctcacaatcagcaaagtttgacccatcatcaaaaatttatgaaatcagcaatcgg
tggaagttgatgagtcaggcacaactgcagaaagaggcaaaggaagaagccaaaaagaaa
gcagtacagcagagagccgctcgtgaacaggtgcagaaggagtgcaaagcaacagcagag
aatattgtctcagtccgtcagcaagctgtgcaggaacaggccagcaagaagagggagaga
atcaccagtgaaccaggaaccgagacaccaaaacaagagaagaaacggccaaaagcctcc
cagcagccagaggagcaggaaatgccaaagcagttcaccccctttgattacagcaagtct
aacttcaaggtgttcgctggaaacagcaaatccaagcagtcatcccagtttgatccagcc
aagcaggcccacacaggcaagaaattctctggagccaacaaacttcagcacccagctgga
aataaaagcatgtcctacctggctgggaaaagtgatcggggctccaggcacagctggcca
aaaagatag
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