Chrysemys picta (western painted turtle): 101950306
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Entry
101950306 CDS
T04662
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101950306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpic03009
]
101950306
Ribosome biogenesis [BR:
cpic03009
]
Eukaryotic type
Pre-60S particles
RNases
101950306
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
zf-C2HC_3
Motif
Other DBs
NCBI-GeneID:
101950306
NCBI-ProteinID:
XP_005294809
LinkDB
All DBs
Position
7:complement(2849448..2878570)
Genome browser
AA seq
1095 aa
AA seq
DB search
MLRSAGYFSGFSCPFDGASGAGCPRPHCQYRHEAGRSGQQPLSDAPAMELGKSIQELERI
KKAIESVKTEVEEGQKKLSQYNLQDEIPKNSLTSKTNDVKGNKTSPDDDGLCSSLTKDKC
LVAPVSKYSSKGCHLVSSKYVIDHSCPATDLEYDPLLNYSAGLLSSSIMKEQENEIQQFK
RVKMPLADFHMESPKMSPCGNRHGSPKKRSRSYSPIKLEIKLQESDDDDILVIDAPPLTV
TKKPRISRSFKNWNREENKQVAVTCAENLQNSNVAEDALKSIEEKRAEVTVILQKDANAD
VSNPEKSLKTPPKTQSAYLPDVKINALKSLNNLCEQRKSFTVSKENNISSISHIKAQTQK
ETLKKEDPKSEISVKTSVEELSTNKYKNTPTCKSEAQTSLYFEASSKDKTVLTAQGTCKK
LPINIGKIQIIHENGENEVLGNAPIHPSTPLNLGEKICHDVDLLTKNRSGETNSNTMNTT
IQESEIIILDSSSEEEMEYSEEDTELSESDDPIEECRRIFNEFVESEAQKQEMAKQALGA
HAEVDTLDTKTNMVPGQKKRIAHTAKFDVQTNKEILVPFKAPLPQQSCPTRILQAQQQAV
QITAAVKSGQAFVAATSGQKKTVPVLSTTQIQNVGPMVCLNLLEVQPVATSSGQLNVFLQ
GNAVTAMPCRPSNISIKRIAPMPIKVSSRRRLSIIPESGSKVPHDTRQRYVNFFVEEYLK
VCRTVNEAFDKALVEEKAIYDRCGSKNMYLNIAVNTLKKLRDQGSLSPNGQSCGSRWTNT
TGSRKSEEKNDFSGIVLYRILKDYVLTEEQLHESGYPQPNPEKPGSAILGNGITKTAVSD
ASKRVCCRCGEIYTVTASGKHIRKEECNYHSGRVLRQKVPGGLETRYSCCEGVVGSPGCQ
VAKLHVHDGRKENLDGFVKTFIKLTPADGNHGVFALDCEMCYTTQGLELTRVTVVDSNLQ
VAYDTLVKPDNEIIDYNTRFSGVTEEDLKNTSSSIRDVQAILLNLFSADTILIGHSLEND
LFALKLIHNTVVDTAVVFPHRLGLPHKRALRNLMADYLRRIIQDDVGGHDSSEDAAACME
LMLWKVKEDTKGRKW
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctccgcgggttacttcagtggcttttcctgccctttcgatggcgcctcgggc
gccggctgcccgcggccccactgccagtataggcacgaggcggggcggagcgggcagcag
ccgctgagcgacgcccctgccatggagctaggtaaaagtatacaagaattggaaagaatc
aaaaaagcaattgagtcagtcaagactgaagttgaagaagggcagaagaaactctcgcag
tataatttgcaagatgaaatacctaaaaactctttgacatctaaaacaaatgatgttaaa
ggaaataaaacttccccagatgatgatggtctgtgtagctctcttacaaaagacaaatgt
cttgtagctccagtctcgaagtactctagcaaaggctgtcatttggtatccagtaaatat
gtcattgaccatagttgtccagcaactgaccttgaatatgatccactgctaaattattct
gcaggcctactcagctcttccataatgaaagagcaggaaaatgagatacagcaatttaag
cgggtgaaaatgcctcttgctgattttcacatggagtctccaaaaatgtctccatgtgga
aatcggcatggatccccaaagaagagatcaagaagctattcacctatcaagcttgaaata
aagctccaagaatctgatgatgatgatattctggttattgatgctccaccattgactgtc
actaagaagccaagaataagtaggagctttaaaaactggaatagggaagaaaacaaacaa
gttgctgtaacatgtgcagaaaatctgcagaatagtaacgtagcagaagatgctcttaag
tctattgaggaaaaacgagcagaagttactgtaattctgcaaaaggatgccaacgcagat
gtaagcaaccctgaaaaatcactgaaaactccaccaaaaactcaaagtgcatatttgcct
gatgtgaaaattaatgctttgaagtctttaaataacctttgtgaacaaagaaaatcgttt
actgtctctaaggaaaataatatatcttcaatttctcatattaaggcacagacacagaaa
gaaacgttgaagaaagaagatccaaagagtgaaatatcagtgaaaacatctgttgaagaa
ttgagtactaataaatataaaaacacaccgacttgcaagagcgaggcccaaactagcctg
tattttgaagccagctcaaaagacaaaactgtgctaactgcacaagggacttgtaaaaaa
ttacctataaatatagggaaaattcagatcatacacgaaaatggtgaaaatgaagtgttg
gggaatgcacccattcatcccagcacacccttgaatttgggtgagaaaatttgtcatgat
gtagatctcttgactaaaaaccgtagtggagaaactaatagtaatactatgaacactacc
atccaagaaagtgaaataattatattagattcttcttcagaagaagagatggagtatagt
gaagaggatactgaactctctgaatcagatgaccctatagaggaatgccggagaattttc
aatgagtttgttgaaagtgaagcacagaagcaagaaatggctaagcaggctcttggagct
catgctgaagtagatacattggataccaagacaaatatggttcctgggcagaagaaaaga
attgcgcacactgcaaaatttgatgtacagaccaacaaagaaatacttgtgccttttaag
gcacctcttccacagcaatcttgtcctaccagaatcctgcaggcacagcaacaggcagtg
cagataacagctgctgttaaaagtggacaggcttttgttgctgcaacttctggacagaag
aaaactgtacctgtattgtcaactactcagattcaaaacgtaggaccaatggtatgttta
aatttgcttgaagttcaacctgttgcaaccagcagtggtcaactgaatgtattccttcaa
ggaaatgctgtaacagcaatgccatgcagaccttctaatatttcaataaaaaggattgct
cccatgcctattaaggtttctagtcggagaaggctttctataattccagaatctggatcc
aaagttccacatgacacaagacaacgatatgtcaacttttttgttgaagaatatttgaaa
gtttgtaggacagtaaatgaagcttttgataaggcattggtagaagaaaaagcaatttat
gatcgttgtggcagtaaaaatatgtatctgaacatagctgtgaacacccttaaaaagctg
agggatcaaggtagtctctctccaaatgggcagtcttgtggtagcagatggactaataca
actggatctagaaaatcggaagagaagaatgatttttcagggattgttctctatagaatt
ttaaaagactatgttctgactgaggaacaattgcatgagagtggctacccgcaaccaaat
cctgaaaaacctggcagtgctatattgggtaatggcattacaaaaacagctgtatctgat
gcttccaaaagagtatgttgtagatgtggagaaatatacactgttactgcttcaggaaag
cacattcgtaaagaagaatgcaactaccattctggtagagtactaagacaaaaagttcct
ggtggcttggaaacacggtatagctgttgtgaaggagtagttgggtctcctggatgccag
gttgcaaagctccatgtccatgatggccgaaaggagaacctggatggctttgtgaagaca
tttatcaaactaactccagctgatggaaatcatggtgtgtttgcactcgactgtgagatg
tgttacacaacacaaggtctggaacttactagagtgacagtggttgattcaaacctacag
gttgcctatgatacacttgttaaaccagataatgaaatcatagactataatactagattt
tctggagtgacagaagaggacttgaagaacacatcatcatctattcgggatgtgcaggca
atattgctaaacttgttcagtgcagatactattttaattggacacagcttagaaaatgat
ttatttgctcttaagctgattcataacactgttgtggacacagcagtggtgtttcctcat
cggctaggcttgcctcataaaagagcacttagaaatctaatggctgattacctcagacga
attattcaagatgatgttggtggccatgattctagtgaagatgctgctgcttgtatggaa
ctgatgctttggaaagtaaaggaggatactaagggcagaaaatggtga
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