Chrysemys picta (western painted turtle): 101950474
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Entry
101950474 CDS
T04662
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
101950474 (TNRC6A)
03036 Chromosome and associated proteins [BR:
cpic03036
]
101950474 (TNRC6A)
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101950474 (TNRC6A)
Chromosome and associated proteins [BR:
cpic03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101950474 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101950474
NCBI-ProteinID:
XP_042708963
LinkDB
All DBs
Position
9:complement(2038717..2202453)
Genome browser
AA seq
1986 aa
AA seq
DB search
MRTRGPWERKGQHISNKEGNIAAAISQPMDPRFPRELEAKATKEVERKLSRDLVQEEEEQ
LMEERKKRKEDKKKKEAAQKKAIEQKIKVPEQTKTSVSQPQPVTSNGTSTATSTNNNAKR
ATASNQQQQQTLPRYPPREVPPRFRHQEQKQLLKRGQQLPVIAANLGSTPKVLNSQSGGS
AVTSKQPVTNGEVPNSSSKKQSGMPPIRDLVSHSPNQSDLNHSGLGSHYENSHWGPVSSN
SDSSTNWDKVIVDGSDKVAWPSITGSDPELASECMDTDSASSSGSERNLVIMASGSTGGE
NDSVRNGIGHGSQNKFVVGSNSNNVGNGSINGPWGLSHGTIISTCQVSVDAPDSKSESSN
NRMNAWGTINSSSNGGLNPSTLNSNGNHGAWPVLENNGHALKGSVGSGNSGTNIQCSTIG
QKSNNQSINSKVGGSAHGSWASLQENCDSEVNGTRKVSFSGQPQNLNTEMNGPNNTTNFM
TSSLPNSAGSVQINKLPNNTGPGAWRVSTMNHSQIQASPVTNGTSTSHLSNGEAKNGGSY
GTTWVAYGSNYSGDKCSGPNSQANGDTVNATLTQPGSSGPGSTNFQINGNKGGGVWEGGT
VNSQNMPWGSANGASSGGSRRGWGNPAQNTGTSISNGEWNKLPSNQHSNESVNGNSRKFT
NGWKSAEEDDLNSQNSAASQITEQNNVWAKTGTGDSEGSTESTGCHDDKVTAEGQNRERR
KVDQHALLQSIVSRTDLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGGS
VTQTSSSGGCVERPSPNANDTSSISGWGDPKSATRWGDSKGSNSQGGWEEDSAATVMVKS
NQIWVSGKEDKSSWNDTQKIKQGWADGQKASQGWAMSANDSWGENSRSNHWGEAKKSSSG
GSDSDRSVSGWNESKSNSVTWGSSNTNPNHSSGWDEPAKSNQSQGWGETPKSNQPQGWGD
SSKPVNSPDWNKQQDVGSWGAPSTTNKPPGAGWLGGPIPSPAKEEEPTGWEEPSPESIRR
KMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNSSSSSDQQAQVHQQLLPSSAMSNKESSNG
SGWGEPSTPATTVDNGTSAWGKPLDTGTSWGEPISDAAGTSGWGNASVGQQASSKPGPKS
MQDGWCGDDMSLPGSRQTSWEEDDEVEIGMWNSSSSQEVNPSLNWPPYMKKMPTKGTMKG
GNKQDETWINPFIKQFTNLSFSVSMRESPEETIPSNKMDMSGGILQEKRIELDKHGLNVG
DYNRVVGKGPGSRPQISKESSMDRNPYFDKDGIVADESQNMQFISNQNMKLPPSNSALPN
QALGSLAGLGMQNLNSVRQNGNPSVFGVGNIAAQPRSMQQPPAQPLNSSQPNSRAQVPPP
LLSPQVPVSLLKYAPNNGGLSPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQKAQNQ
RSMPSTGRQQQEQQGRSLSMQQQMMQQSRQLDPNLLMKQQTPPSQQQPLHQPAMKSFLEN
VIPHATPELQKGPSPINAFSSFPIGKKFANQTHTISKGMNSNLNVNMDMSSIKEPQSRLR
KWTTVDSISVNTSLDQNSSKHGAISSGFRLEDSPFVPYDFMNSSNSPASPPGSVGDGWPR
AKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRN
SGSSSSLNTALPSTSAWSSIRASNYNVSLSSTAQSTSVARNSDSKSTWSPGSVTNTSLAH
ELWKVPLPPKSITAPSRPPPGLTGQKSPLSTWDNSLRLGGGWGNSDARYTPGSSWGESSS
GRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSL
HMCVLGNTTILAEFASEEEISRFFAQGQSLTPSPGWQSFGSSQNRLGSIDGSHSFSNRND
LNHWNGAGLSGTSSGDLHGTSLWGSPNYSTSLWGTPSSSDTRGISSPSPINAFLSVDHLG
GGGESM
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccagggggccctgggagaggaaagggcagcacatttctaacaaagaaggaaat
atcgctgcagccattagccagcctatggatcctcggttcccaagagaattggaagctaaa
gctaccaaagaagttgaaagaaaactaagcagggatttagtgcaagaagaggaagaacag
ttgatggaagaaaggaaaaagagaaaagaagacaagaaaaagaaggaagctgctcaaaaa
aaggccattgaacaaaaaatcaaagtgccagaacaaacaaagaccagtgtaagccagcct
cagcccgtcacctctaacggcacttccacagcaaccagcactaataataatgccaagcgg
gccacagccagcaatcagcagcagcagcagaccttgcctcgataccctcctcgtgaagta
ccaccacgatttcgacaccaggaacagaaacagcttttgaagcgaggtcagcagttacca
gtgatagctgcaaacctgggatccactcctaaagtattaaacagccaatcaggaggcagc
gctgtcacaagtaaacagccagtgaccaacggagaagtgccgaacagcagcagcaaaaaa
cagtcaggcatgcctcccattcgggacttggtcagccattcccctaaccagtcagatctg
aaccacagtggtctaggatcccattatgaaaattctcactggggaccagtctcttcaaat
agtgactccagcacaaactgggataaagttatcgtagacggttctgacaaagtagcatgg
ccatcaatcacaggcagtgacccagagttggcttcagaatgtatggacactgactccgcc
tctagctctgggtcagagagaaatcttgttattatggcttcagggagcacaggtggtgaa
aacgatagcgttcggaatggcattggacatggttctcaaaataagtttgtggttggtagc
aacagcaataatgtgggcaatggaagtattaatgggccatggggtttatcccatggaacc
ataataagcacatgtcaagtttctgtggatgctcctgacagcaaatctgaaagtagcaac
aatagaatgaatgcttggggcaccataaactcttcatcaaatggagggttaaatccaagc
actttgaattcaaatggcaaccatggtgcctggcctgtattggagaacaatggacatgcc
ctgaaagggtctgtagggagtggtaattctggcacaaatattcagtgcagtaccataggt
cagaagtctaacaatcagagtattaactctaaagtgggtggttcagcccatggttcctgg
gcaagccttcaggaaaattgtgattctgaagtgaatggtacaaggaaggtttcattcagt
ggacaacctcaaaaccttaacactgaaatgaatggaccaaataacactactaactttatg
acctctagtttaccaaactctgctggttcagtacagattaacaaactgcctaataataca
gggcctggggcctggcgtgtgagcacaatgaatcattctcagattcaggcctctccagtt
acaaatggcacttccacttctcatcttagcaatggtgaggcaaaaaatggtggatcttat
ggtactacgtgggttgcctatggttctaattactctggagacaaatgttcaggcccaaac
agccaagctaatggtgacactgtgaatgcaactctaacgcagcctggcagcagtgggcct
ggcagcactaattttcaaatcaatgggaataaaggaggaggggtctgggagggagggaca
gtcaactcccaaaatatgccatggggaagcgcaaatggtgcgagttctggaggaagtcga
agaggatggggcaaccctgcacaaaacactggcactagcatttcaaatggggaatggaat
aaactgcctagcaatcagcattccaatgaaagcgtaaatggaaatagtaggaagtttaca
aatggatggaaatctgctgaagaggatgatcttaatagccagaattctgctgcatctcag
ataactgagcagaacaatgtatgggccaaaacaggtactggggatagcgagggtagtaca
gagagcactggatgccatgatgataaagtaactgcagaaggacagaaccgggagagaaga
aaagttgaccagcatgcattactccaaagtatagtgagcagaactgacttagatccacgt
gtcctttccaactctggttggggacagactccaattaaacaaaacactgcctgggatact
gaaacatcgccaagaggtgaaagaaagactgacaatgggacagaggcctggggaggctct
gtgacacagacttccagctcagggggatgtgtggagagacctagccctaatgctaatgat
acctcatctatatcagggtggggagatccaaagtctgctacaaggtggggagactccaaa
ggctccaacagccaaggggggtgggaagaggattctgctgctacagtaatggtcaagagc
aatcaaatatgggtaagtggcaaagaggacaagtcgtcctggaatgatacacagaagatc
aaacagggatgggcagatggacaaaaagccagccaaggttgggcaatgtctgccaacgac
agctggggagaaaattcaagaagcaaccattggggtgaagctaagaaatctagttcagga
ggtagtgacagtgacagatcagtatctggttggaatgagtctaaatcaaattctgtcact
tggggaagtagtaatacaaacccaaatcattcttcaggatgggatgagcctgcaaagtct
aatcagagccagggctggggcgaaactcccaaatcaaatcagcctcaaggttggggtgat
tcgtcaaagccagtcaactccccagactggaacaagcagcaagatgttggctcttgggga
gcaccatctaccacaaataaaccaccaggtgccgggtggttgggtggaccaataccaagt
ccagcaaaggaagaggagcccacaggatgggaggagccatccccagaatcaatacgccgt
aaaatggaaattgatgatggaacttctgcttggggtgatccaagcaaatacaactacaaa
aatgtgaatatgtggaataaaaatgtcccaaacagtagcagcagttcagaccagcaagca
caggtacatcagcagctactgccttcaagtgccatgtccaacaaggagagcagtaatggt
tctggttggggagagccttctactcctgccactactgtagataatggaacgtccgcgtgg
ggtaaacccctggatactggtactagctggggagagcccatcagtgatgcagcaggcacc
tctggctggggaaatgcttctgttggtcagcaggcttcaagtaaacctgggcctaaatct
atgcaagatggttggtgcggtgatgatatgtcattgccagggagtcggcagaccagctgg
gaggaagatgatgaagtagagattggaatgtggaacagcagttcctcccaagaagttaac
ccatctttgaattggccaccgtacatgaaaaaaatgcctacaaagggaacaatgaaaggt
ggaaataaacaagatgaaacgtggataaatccattcattaagcaattcacaaatctcagt
ttttcagtaagtatgagagaatcaccagaagaaaccataccgagcaataagatggacatg
tctggaggaatattacaggagaaacgaatagagttggataagcatggcctgaacgttgga
gattacaatcgggtggtaggaaagggccctggttctcgtcctcagatttccaaagagtct
tccatggatcgcaatccttattttgataaggatggcattgtagcagacgagtcccaaaac
atgcagtttatttccaatcaaaacatgaagcttcccccttcaaatagtgcactacctaac
caagcccttggctccctagcagggctgggtatgcaaaacttgaattctgttagacagaat
ggcaatcccagtgtgtttggcgttggtaatatagcagcacagcccaggagcatgcaacag
cccccagcacaacctcttaattcatcccagcctaactcacgtgctcaagtgcctcctcca
ttactctcccctcaggttccagtatcattactgaagtatgcaccaaacaatggtggcctg
agtccactttttggcccacagcaggtagccatgttgaaccaactatcccagttgaaccag
ctttctcagatctcccagttacaacggttgttggctcagcagcaaaaagcgcagaatcag
agaagcatgccttctactggtcgtcaacagcaggaacagcagggtcgatctcttagtatg
cagcaacagatgatgcaacagtcccgtcagcttgatccaaacctgttaatgaagcagcag
actccaccatctcaacagcagccactccatcagcctgccatgaaatctttccttgagaat
gtcataccccatgctactcctgagctgcagaaagggccatcaccgataaatgcattcagc
agcttccctataggaaagaagttcgccaatcaaactcataccatttccaaaggaatgaac
tcaaacttgaatgtaaacatggatatgagcagtattaaggagccgcaatcacgactgagg
aaatggacaacggtggacagcatttctgttaacacctcattggatcaaaactccagcaaa
catggtgctatttcaagtggttttaggctggaagattccccatttgttccatacgacttt
atgaacagcagtaattcaccagccagtcctccgggatctgttggggatggctggccacgt
gccaaatcgcctaatggctctagcagtgttaactggccaccagagtttcgtcctggtgag
ccatggaaaggttatccaaacatcgaccctgaaactgacccttacgtcactcctggcagt
gtcataaacaatctttcaattaatactgtgcgggaagttgaccacctcagggacaggaac
agtgggtcatcctcatctttgaacaccgcgctgccttcaactagtgcctggtcatccatt
cgtgcctccaactacaatgtttccctcagcagtacagcacaaagcacttcagtagccaga
aacagtgattccaaatcaacgtggtctcctggttcagtcactaacacctctctggctcat
gagctgtggaaggtccctttgccacctaaaagcatcactgctccgtcccgcccgccaccg
gggctgacaggccagaaatcacctttgtccacatgggataactcccttcgtttgggtgga
ggatggggaaattctgatgccagatatacccctggttcaagctggggtgagagcagctca
gggagaataacgaattggcttgttctaaaaaaccttacacctcagattgatggctcaacc
ctgcgtactctgtgcatgcagcacggtccactaataacattccaccttaacctcccacat
ggtaatgctttggtccgttacagttcaaaagaagaggtagtgaaggcacaaaaatctctg
cacatgtgtgtattagggaacactactattctggctgagtttgccagtgaagaggagatt
agccgcttctttgcacaaggccagtctctgactccttctcctggctggcagtctttcgga
tccagccagaaccgacttggatccattgatggttcccattcgttctcaaaccgtaatgat
ctaaatcactggaatggtgctgggctgtcgggaactagcagtggagaccttcatggcact
tcactttgggggagccccaactattccacaagcctgtggggtaccccaagcagcagtgac
accaggggaattagcagcccatcccccatcaatgctttcctttctgttgaccacctaggt
ggaggtggagagtccatgtaa
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