Chrysemys picta (western painted turtle): 101950701
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Entry
101950701 CDS
T04662
Symbol
PDZRN4
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpic04121
]
101950701 (PDZRN4)
Enzymes [BR:
cpic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101950701 (PDZRN4)
Ubiquitin system [BR:
cpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
101950701 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-RING_2
Sina_ZnF
zf-RING_5
zf-C3HC4_3
zf-TRAF
zf-rbx1
PDZ_Tricorn
TRAF3_RING
zf-RING_6
IBR_1
Motif
Other DBs
NCBI-GeneID:
101950701
NCBI-ProteinID:
XP_008160727
LinkDB
All DBs
Position
1:complement(11238024..11608183)
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AA seq
1061 aa
AA seq
DB search
MGFDLDRFAEPVDPDLKCKLCSKVLEEPLSTPCGHVFCAGCLLPWAVQRRLCPLQCQPIS
AKELHQVLPLRSLIQKLEIKCDYSPRGCGRTVRLHQLAAHVEMCDYSPARCRHKGCPEVL
SLKDVDAHMRESCEHRPAGICQQGCGLVLLQRDLAGGAAGGGHCCLRALRSQTSSLQGQR
ASLEQELKRQALKWSKREKSLLAQLAALQSEVQLTALRYQVKFNQYMSHISSITRNLAGS
HPCKGGESKPLTIMLQRENDTLGFNIVGGRPNQNNQEDSSPEGIYVSKILENGPADKTEG
LQIHDKIIEVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRAPVNKTHGSSQDVQLVDAS
TQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFYEGNEYLSSLPADAD
RTEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPNSIAARDGRIREGDRI
LQINGQDVQNREEAVALLSSDECKKIVLLVARPEMQLEEGWLDDERNEFLEELNLEMLEE
QHNEVMQFTANEVEQPKKHEEEDGTTDTATSSSNNHEKDSGVGPTDESLRNDESSEQENA
PDEQNKTTLRSTRELGQSQDTLGSIELQCNESFVSGEYIESDFIGNQDEECERFRQLLEL
KCKIRNHGEYDLYYSSSTIQCNRREQDGVEHELQLLNEELRNIELECQNIMQAHRLQKVK
DQYGDIWALHDGGFRNYNTSVDVQRGKLDDIIEHPEKSDKDSSSAYNTAESCRSTPLTVE
QSPDSSLQRMISITNRKNLRSTIVANQLCPGQSGREVTPSKTTEQNSTVEEKETVAESSN
FTDQEKQSTEHIPYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQKSAVEYAQSQLSLVSM
CKDSQKCTEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEM
KMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEINILELSHKKM
MKKRNKKILDSWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgacctggatcgctttgccgagcccgtggacccggatctcaagtgcaaactg
tgcagcaaggtgctggaggagccgctgtccacgccgtgcgggcacgtcttctgcgccggc
tgcctgctgccctgggcggtgcagcggcgcctgtgccccctgcagtgccagcccatctcg
gccaaggagctgcaccaggtgctgccgctcaggagcctcatccagaagctggagatcaag
tgcgactacagcccgcggggctgcggccggaccgtgcggctccaccagctggccgcccac
gtcgagatgtgcgactacagcccggcccggtgccgccacaagggctgcccggaggtgctc
agcctgaaggacgtggacgcgcacatgcgggagagttgcgagcaccgcccggccggcatc
tgccagcagggctgcggcttggtgctcctgcagcgggacctggcggggggcgcagccggc
ggggggcactgctgcctgcgggcgctgcgcagccagaccagcagcctgcaaggccagagg
gccagcctggagcaggagctgaagcgacaggccctgaagtggagcaagagggagaagtcg
ctgctggctcagctcgcggcgctgcagagcgaggtgcagctcacggcgctcaggtaccag
gtgaagttcaaccagtacatgagccacatcagcagcatcaccaggaacctggccggcagc
cacccctgcaagggaggagaatctaagccattaaccatcatgctacaaagagaaaatgat
actttgggattcaatattgtaggaggacgacccaatcagaacaatcaggaggactcttca
cctgaaggaatttatgtgtcaaaaatcttggaaaatggacctgctgacaagacagaaggc
ctgcaaattcatgacaagatcattgaggtcaatgggaaggacctctccaaggccactcac
gaagaggcagtggaagcttttcggaatgccaaggagccaattgtagttcaggttttacgg
cgagcacccgttaataaaacacatggtagctcacaggatgttcagcttgtggatgctagc
actcagaccgacatcacctttgagcatattatggctctggccaagcttaggccatccaca
cctccagtaccagatatctgtccctttctgctttcagacagctgccattctcttcaccca
gtggagcatgaattttatgaaggtaatgagtatctttccagcctgcctgctgatgcagat
agaacagaggactttgagtatgaggaggtcgagctgtgtcgtgttagcagtcaagagaag
ctggggctaactgtctgctacagaacagatgatgaggaagacacaggaatctatgtcagt
gaggttgatccaaacagcattgctgccagagatggccggatccgagaaggagaccgcatt
ctgcaaataaatggccaagatgtccagaatcgggaggaggcggtggcattgctctccagt
gatgaatgcaagaaaattgtgttgctggttgcaagaccagagatgcagctggaggaaggg
tggctggatgatgaaaggaatgaattcttagaggagttaaacttggaaatgttggaagaa
cagcataatgaagtaatgcagttcacagccaatgaggtggagcagccaaaaaagcatgag
gaggaggacggcacaacggacactgcaacctcgtcatccaataaccatgagaaggacagt
ggagtggggcctacagatgagagtctgcgtaatgacgagagctcagagcaggagaatgca
cccgatgagcagaacaaaacgacactgcggagcacccgggagctgggacagagccaggat
acgttaggaagcattgaactccagtgcaatgaaagctttgtgtcgggggaatacattgaa
tctgatttcattggaaaccaagatgaggagtgtgaaaggttccggcagctgctggagctc
aagtgcaagattagaaaccacggagagtatgatctgtattactcgagcagtacaatacag
tgtaacagaagggagcaagatggggtggagcatgagctacagttactcaatgaggaactg
agaaatattgagcttgagtgtcagaatataatgcaggctcacaggcttcaaaaggtgaag
gatcagtatggagacatttgggcattacatgatggaggattcaggaattataacaccagc
gtagatgtacaaagaggtaaactggatgatatcatagagcacccagagaaatctgacaaa
gacagctctagtgcttacaacacagcagaaagctgcaggagcactccactgactgtagag
cagtcccctgatagctcgctccagagaatgatcagcatcaccaacaggaaaaacctgaga
agcacaattgtagctaatcagttgtgtcctggacagagtggtagggaggtaacaccatcc
aaaaccactgagcaaaacagcactgttgaagagaaggaaacggttgcagaaagtagcaat
ttcacagaccaggagaagcaaagcactgagcacattccttacctatctccgtatcatagc
tcttcataccggtatgggaatatacctgctcatgcaaagcattatcaaagctatatgcag
ctgatccaacagaaatccgcagtggagtatgcccaaagtcagctcagtctagtgagcatg
tgcaaagattcacagaagtgtacagagcccaaaatggaatggaaagtgaaaataaggagt
gacggaacaaggtatatcactaagagaccagtgcgagacagaatcctgaaggaacgtgcc
ttaaagattaaagaggagcgcagtgggatgacgacagatgatgatacgatgagcgaaatg
aagatgggtcgttactggagcaaagaggagcggaagcagcatttggtgcgagccaaagag
cagaggcggcggcgagagttcatgatgcggagcaggttagagtgtcttaaggaaagtcca
cagagcggcagtgagggcaaaaaagaaattaacattcttgaacttagtcacaaaaagatg
atgaaaaaaagaaacaagaaaatcttggacagctggatgacaatccaagaactgatgaca
catggtgctaagtctccagatgggacaagagtgcacaatgcctttttatcagttactact
gtatga
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integrated database retrieval system
