Chrysemys picta (western painted turtle): 101950884
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Entry
101950884 CDS
T04662
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04136
Autophagy - other
cpic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101950884 (ATG4B)
04136 Autophagy - other
101950884 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpic01002
]
101950884 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpic04131
]
101950884 (ATG4B)
03029 Mitochondrial biogenesis [BR:
cpic03029
]
101950884 (ATG4B)
Peptidases and inhibitors [BR:
cpic01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
101950884 (ATG4B)
Membrane trafficking [BR:
cpic04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
101950884 (ATG4B)
Mitochondrial biogenesis [BR:
cpic03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101950884 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
101950884
NCBI-ProteinID:
XP_005295818
LinkDB
All DBs
Position
9:43906626..43944990
Genome browser
AA seq
393 aa
AA seq
DB search
MDAATLTYDTLRFEYEDFPETKEPVWILGRTYSVFTEKEEILLDVTSRLWFTYRKNFPAI
GGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWVKGKRQTDNYFNILNAFIDKKDS
YYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLRKLATFDTWSSLAVHIAMDNTVVMEEIRR
LCKSNFLCAGAAAFPAAESDVLYNGFPVGAEVTDRLSQWKPLVLLIPLRLGLTDINEAYI
ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAMEPSDNGCIPDESFH
CQHPPCRMSIAELDPSIAVGFFCNTEEDFNNWCQQIKKLSLLRGALPMFELVEHQPSHFS
SPDVLNLTPDSSDADRLERFFDSEDEDFEILSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctactctgacctatgatactctcaggtttgagtatgaagacttccctgag
accaaagagcctgtttggatactggggagaacatacagtgtgttcacagagaaagaggag
atcctgttggatgtgacatctcggctttggttcacatacagaaagaactttcctgccatt
ggaggaacaggccccacgtctgatactggctggggctgcatgttgaggtgtggtcagatg
atcttcgctcaggcattagtctgccggcacttaggcagagattggaggtgggtgaaaggg
aagaggcagacggataattacttcaacatacttaatgccttcattgacaaaaaagacagc
tactactccatccaccagatagcccagatgggagttggagagggcaaatcgataggccag
tggtacggaccaaacacagttgcacaagtgctcagaaaacttgccacttttgatacatgg
agctcattggcagtgcacatagccatggacaacactgtagtgatggaagaaatcagacgg
ttatgcaagtccaatttcttgtgtgctggggctgcagcgttccctgctgcagagtcagac
gtgctctataatgggttcccggttggagcagaggttacagataggttgtcgcaatggaaa
ccattggtgctcctgatacctcttcgccttgggctcacggatatcaatgaagcttatatt
gaaacactaaagcactgcttcatgatgcctcagtccctgggagtgattggagggaaaccc
aacagtgctcattacttcattggctatgtaggtgaggagctaatttacttggacccccat
actacacaacctgcaatggaacccagtgacaatggctgtatccctgatgagagcttccac
tgtcagcaccccccctgccgaatgagcattgctgaacttgacccatccatcgcagtgggc
tttttctgcaacacagaggaagactttaataactggtgccagcaaatcaaaaagctgtcc
ttgctaagaggagctctgccaatgtttgaactggtagaacatcagccatcacacttttcc
agccctgatgttctgaatctcacaccagactcttctgatgcagacaggttggaaagattc
tttgactcggaggatgaagactttgaaatcttatctctttga
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