Chrysemys picta (western painted turtle): 101950909
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Entry
101950909 CDS
T04662
Symbol
AFDN
Name
(RefSeq) afadin isoform X13
KO
K05702
afadin
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04517
IgSF CAM signaling
cpic04520
Adherens junction
cpic04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101950909 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101950909 (AFDN)
04530 Tight junction
101950909 (AFDN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
101950909
NCBI-ProteinID:
XP_005303992
LinkDB
All DBs
Position
3:51330055..51564951
Genome browser
AA seq
1821 aa
AA seq
DB search
MSGGGSREEERRKLADIINHWNANRLDLFEISPPTEDLEFHGVMRFYFQDKAAGNFATKC
IRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGERRLDIDEKPLVVQLNWNK
DDREGRFVLKNENDTLPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRREKEALRQ
ASDRDDRPFHGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRS
SDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEALEKYGLEKENPKDYCIAR
VMLPPGAQHSDDKGAKEIILDDDECPLQIFREWSSDKGILVFQLKRRPSDYIPKKTKKQT
DGKPLKGKERVDGSGYGSCLPPEKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLY
RLQLSVTEVGTEKFDDNSIQLFGPGIQSHHCDLTNMDGVVTVTPRSIDAETYVEGQRISE
TTMLQSGMKVQFGSSHVFKFVDPSQDHIIPKRTLDAGLMIKGPRHKTGVVQETTFDLEGD
VHSGTALPASKSTNRLDSDRTSSASSTAERGMVKPMIRVEQQQDYRRHDGRPQDMVGPEL
ILPASIEFKESSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVLSNQYRPDISPTER
THKVIAIVNKMVSMMEGVIQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVL
AHLVQMAFKYLVHCLQSELNNYMPAFLDDPDENNPQRPKIDDVLHTLTGAMSLLRRCRVN
AALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQLGHIEAWAEKQGLELAA
DCHLSRIVQATTLLTMDKYSHDDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPTELI
ENVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPSGLQEFLDPL
CQRGFCRLTPHPRSPGTWTMYFEGADYESHLLRENAELAQPLRKEPEIITVTLKKQNGMG
LSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMT
RTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFELYNNSAQNG
SPESPQLPWTEYNEPKKLSGDDRLMKNRADHRSSPNVANQPPSPGGKNAYAAGTTTKITS
VSTGNLCTEEQTLPPRPEAYPIPTQTYTREYFTFPASKSQDRMGPAQNQWPSYEDKPQIQ
AESNHSISAAMQRAAHSQEELRDDKVFQPERNRLEVVIRKDVEYIDRKSDSDPWMNSSVD
SSTSSQEHLNHSSKSISPGSCLTKSGPGRWKTPVINQPTPVAVSQPIRTDLPPPPPPPPV
HYAADFDGLQMDLPLPLPPPPPSNQLGTLAAAERKKREEHQRWYEKEKARLEEERERKRR
EQERKLGQMRTQPMVPPVSVQQVKPEKPSTLQRSQDTVIRELQPQQQPRTIERRDLQYIT
ISKEELSSSDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQNKPDRTAEENDRLRK
LMLEWQFQKRLQESKQKDEDDDEEEDDDVDTMLIMQRLEAEKRARLQDEERRRQQQLEEM
RKREAEDRARQEEERRRQEEERTKREAEEKRRQEEEYYNRLEAERRRQHDEAERRLLEPD
EPGLYRPPLPREYELPPPPPSSNAPPPPPQRNTSYLKTQVLSPDTVYTAKFVAYNDEEEE
DSTLAGPNSYTGSTGAIVGAHEVYRDPREKRSKSQDTDLPGAPENLTFRERQRLFSQGQD
VSNKVKASRKLMELENELNTK
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcggcagccgggaggaggagcggcgcaaactcgccgatatcatcaaccac
tggaacgcgaaccggctggacctgttcgagatcagcccccccaccgaggatttggagttt
catggcgtaatgagattttattttcaagacaaagcagctggaaactttgcaacaaaatgt
attcgtgtttctagcactgccacaacgcaagatgtaatagaaacccttgcagagaaattc
cgaccagatatgcgaatgttgtcatctcctaaatactcactttatgaagtgcacgtcagt
ggagaaagaagattagatatagatgagaagcctcttgttgtacagttaaattggaacaag
gatgaccgagaggggaggtttgttctcaagaatgaaaatgatacacttcctccaaagaag
gctcagagcaatgggcctgaaaaacaagaaaaagagggagtgatccagaacttcaaacgg
actctatcaaagaaagaaaaaaaagaaaagaagaggcgagagaaagaagcattgcggcaa
gcatcagatagagatgatagaccttttcatggagatgatattgagaattctcgtctcgca
gcagaggtgtacaaagatatgccagagaccagcttcactcggacaatatccaatcctgag
gtagtcatgaaacgacggcgacaacagaaactagagaagagaatgcaggagttccgcagc
tctgatggccggccagactcaggtggaaccctgaggatttatgcagacagtttaaaacca
aatataccatacaagaccatcctgctgtccactacagatactgcagactttgcagttatt
gaagcactggagaagtacggtctggaaaaggaaaatcccaaggattactgtattgctcgg
gttatgcttcctcctggtgctcaacactctgatgataaaggtgctaaagaaattatcctt
gatgatgatgagtgcccacttcaaatattcagggaatggtctagtgataaaggaatacta
gtctttcagttgaaaagacggccttctgactatatcccaaagaaaaccaagaaacaaact
gatggaaagccattaaaggggaaggaaagagttgacgggtctggctatggctcttgcctt
cctcctgagaaactaccctacctggtggaattaagcccagggagaaggaatcactttgcc
tactacaactatcacacttacgaagatggttctgactccagagataagccaaaactctat
cgtctacagttaagtgtcactgaagttggaactgaaaaatttgatgacaattccatccag
ttgtttggtccaggaattcagtctcatcactgtgatctcaccaatatggatggagttgtt
actgttacaccaagaagcattgacgctgaaacttatgtagaaggtcagcgtatttcagag
accaccatgctgcaaagtggcatgaaggttcagtttggatcatctcatgtatttaaattt
gtggatcccagtcaggaccacattattcctaaaagaactctagatgcaggtctcatgatc
aaaggtccaaggcacaaaactggggttgttcaggaaacaacatttgatctggagggagat
gttcacagtggaacagcattaccagcgagcaagagcaccaatagactggatagtgacaga
acttcatcagcatccagcacagctgaacgaggcatggtgaagccaatgattagagtggaa
cagcagcaagattatcgcaggcacgacggcagacctcaggacatggttgggccagaactg
atattacctgcaagcatcgaattcaaggaaagttctgaagatgccttcttatctgccatt
attaattataccaacagctcgacagttcattttaaattatcacctacttatgttttgtac
atgacatgtcggtatgtattgtcaaaccagtacagacctgacatcagtcctactgagcgt
actcacaaagtcattgcaatagtcaacaagatggtgagcatgatggaaggagttatacag
aagcagaagaatattgctggggcacttgccttttggatggcaaatgcatctgaattgctc
aatttcattaagcaagaccgagaccttagccgaattactttagatgcgcaagatgttctg
gcacatttggttcaaatggctttcaaatatttagttcactgtcttcagtcagagcttaac
aattacatgccagcattccttgatgatccagatgaaaataatcctcaaaggcctaaaata
gatgatgtcttgcatacactaactggagctatgtccctgttgcgacgatgtagagtgaat
gctgcactgactatacagctcttctcccagctcttccactttatcaacatgtggcttttt
aatagattggttactgacccagattcaggattgtgttcgcattactggggagccatcatc
cgtcagcagttgggccatatagaggcctgggcagaaaaacagggcctagagctggctgct
gattgccacctaagcaggatagtgcaggcaactacactacttaccatggataaatactca
catgatgacattccaaatattaacagtacctgctttaagttgaattctctacagctacag
gcattactgcagaattatcactgtgctccagatgaaccatttatcccaacagagttgatc
gagaatgtagtggctgttgcagaaaatacagctgacgaactagctcgtagtgatggcaga
gaagtccagctagaagaggatcctgatctacagctgccttttcttttgccagaagatggc
tattcatgtgatgttgtcagaaacattccaagtggtttacaagaatttttagatccacta
tgccagagaggcttttgcaggctgacacctcatccacgttcaccaggcacttggacaatg
tattttgaaggtgcagactatgaaagtcacctgttacgcgagaatgctgagctagctcag
cctttgaggaaagaacctgaaatcatcacagtaacattaaagaaacaaaatggaatgggc
ctaagcattgttgctgctaagggtgcaggtcaagataaacttggaatctatgtcaagtct
gtggtaaaaggaggtgctgcagatgtggatggtcggctagctgcaggggatcagttgctc
agcgtggatggtcgaagtttagtgggtctgtcccaagaaagggcagcagagctcatgaca
agaacaggttctgtagtcaccctagaagtagcaaaacaaggagcaatttaccatggtctg
gcaaccctacttaaccagccatccccaatgatgcaaagagtttcggaccgccgtggctca
ggtaaaccccgaccaaagagtgaaggttttgagctgtataataattctgctcaaaatggg
tcacctgagagccctcagctgccttggacagagtataatgaaccaaagaagctgtcaggg
gatgacagactgatgaagaatcgagctgatcaccgctccagtcccaatgtagcaaatcag
ccaccaagccctggagggaagaatgcttatgctgctggaacgaccaccaagataacttca
gtctctactggaaatctttgtacagaggagcagacactgccaccaagacctgaagcttat
cctataccaacacaaacctataccagagaatatttcacattcccagcttcaaaatcccag
gatcgaatgggtcctgctcagaatcagtggccgagttatgaagacaagccacagatccag
gcagagagtaatcactcaattagtgctgcaatgcagcgtgcagctcattcccaggaagaa
cttcgagatgataaagttttccaaccagagaggaatcgtctggaagtggttataagaaag
gatgtagagtacattgatcgaaagtcagacagtgatccatggatgaattcatctgtggat
tccagcacatccagccaagagcatctgaaccactcctccaaatctatttcccctggttct
tgtttaaccaaaagtggacctggccgttggaaaactccagttatcaaccagccaacacca
gtggcagtttcccagcccatcagaacagaccttcctccacctccccctcctccaccagtg
cactacgcagctgatttcgatggactgcaaatggatttgcctttgcctctgcctccacct
cccccttcaaaccagctaggaacgctagctgctgcagaacgtaaaaaaagagaggagcat
cagcgatggtatgaaaaggaaaaagcgcgactagaggaagagcgagaaaggaagcgtcgt
gagcaggaaaggaaattgggccagatgcgtactcagcctatggttcctcctgtttctgtg
cagcaggtgaaaccagaaaagccttcaacattgcagaggtcccaggacactgtcattcga
gagctacagccccaacagcagccccgaaccatcgaacgtagagatctgcagtacatcacc
atcagcaaagaagaactatcctccagcgatagcttgtctcctgatccctggaaacgggat
gctaaggagaagctagaaaagcaacagcagatgcacattgtggacatgctgagtaaagag
attcaggaacttcaaaacaagcccgaccgcacagcagaagagaacgatcgcctgcgcaaa
cttatgctcgagtggcagttccagaaacgacttcaagagtcaaagcaaaaggatgaggat
gatgacgaggaagaagatgatgatgtggataccatgctaattatgcaacggctggaggct
gaaaaaagagcaaggttacaggatgaagagcgcagacggcagcaacagttagaagagatg
cgtaaacgagaagcagaagatagggccaggcaagaagaagagcgccggcgccaggaggag
gagcggaccaagagagaggctgaagaaaagaggcgacaggaagaggagtattacaaccgt
ttggaagctgaaaggcgtagacagcatgatgaggcagaacgaagattactggaacctgac
gagcctggtctgtacagacctccgcttccacgggaatatgagctcccacccccaccccct
tcatctaatgctcctcctcccccacctcagcgaaacacctcttacctcaaaacacaggtc
ctctcccctgacacggtttatactgccaagtttgttgcatacaatgatgaggaggaggag
gattccactctagcaggaccaaattcttacactggatctacaggagcaattgttggagct
catgaagtttatcgggatccaagagagaaaagatctaaaagtcaagatacagatttacct
ggagcaccagagaacttgacattcagggagcgccaacgacttttttcccagggccaggat
gtatccaataaagtaaaggcttctaggaaattaatggaactggaaaatgagttgaacaca
aaataa
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integrated database retrieval system
