Chrysemys picta (western painted turtle): 101951384
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Entry
101951384 CDS
T04662
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101951384 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpic04990
]
101951384 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
cpic04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
101951384 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
101951384
NCBI-ProteinID:
XP_005285024
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All DBs
Position
9:98248538..98910314
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AA seq
1024 aa
AA seq
DB search
MVDSLIVSLRLLSFIVVLGFQLVIPQTSIEHRKVPQRIEEQSSEDSSAGIPGIWGSWGPW
SACSRSCSGGVMEQTRPCLPSYYHDRAYSRPGQQYPALERTLAPQHSHRREDPLTPYSGH
VISAIRTSVPLHRNEEQLQRGLWASVSSTGRNDSHLNRGTLRGSRHSQRHRTKPERRNRN
QSPIGPGKYGYGKVPYILPLQTDTGQLPQKTRRQRQSTRNQAYEQNQGLGNTHNHPSNPS
VQHGNLYQEERGPQVLGPSIYQQASTHSQAFPASQSLFHGTDSTHHGSASRQPFQGQPHS
PRAGAIVCIGAYKQYKLCNTNMCPESSRNIREVQCASYNNKPFMGRFYEWEPFAEVKGSQ
KCELNCRAIGYRFYVRQAEKVIDGTPCDQNGTAVCVSGQCKSIGCDDYLGSDKVADKCGI
CGGDNTGCKVVSGVFKHTLTNLGYHKIVEIPEGAIKINITEMSKSNNYLALRSRSGRSII
NGNWAIDRPGRYEGGGTTFTYKRPNEISSTAGESFLADGPTDEILDVYMIHQQPNPGIHY
EYIIPEANVISPQLPPHRRPGEPFNGQLELTDGTDHEDGNLHRETDTHTGQSTGTFPVIQ
PGRFPSHQPDNQVPAVQPPRRNREHNWKQVGTTECTTSCGKGLRYPIFHCVNRISHEEVS
ESYCDTSTKPTPEEEACNIFPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANRTLMV
QQYRCHHLEKPETTSTCQLKICSEWQIQTEWTSCSVPCGVGQRTRDVKCVSNLGDIVDDE
ECNMKLRPNDIENCDMGPCAKSWFLTEWSDRCSAECGAGVRTRSVVCMSNHVSSLPLEGC
GNNRPSETIPCDNGPCVGKVEWFAGSWSQCSIECGSGTQQREVICIRKTEGSFDVLNPYE
CSFLERPPSQQSCYLKPCGAKWFNTEWSTCSKSCEGGFRVREVRCLSDDLTPSNQCDPQL
KPEEKEPCNTQDCIPEIDENCKDKYYNCNVVVQARLCVYTYYKTACCASCTRVANRQSGF
LGRR
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagtttaatagtatctttgagacttctcagtttcatagtggtattaggattt
cagctggtcatcccacaaacgtcaattgaacacagaaaggttccccagaggatagaagaa
caaagttctgaagacagcagcgcaggaatcccaggcatatggggcagttggggcccctgg
tctgcttgctctcgaagttgcagtggtggggtgatggagcaaacccggccctgcctccca
agctattaccacgacagggcttattctagaccagggcaacagtacccagccttggaaaga
actcttgcaccccagcattcccaccgtcgtgaagatccattgaccccttattccggccat
gtcatctctgccatccgtacgtccgtgccacttcacagaaatgaggagcagcttcagaga
ggtctttgggcttcagtttcctccacgggccgcaatgacagccatctgaacagaggaaca
ttgagaggcagccggcattctcaaaggcacagaaccaagccagagaggagaaacagaaac
caaagtcccataggcccagggaaatatggatatggaaaagtgccatatatattaccactg
caaactgacactgggcaactgcctcaaaaaacacggcggcagcgacagtcaacaaggaac
caagcgtatgagcagaatcagggtcttgggaacacacacaatcatccatctaacccttca
gttcaacatgggaatctttaccaagaagaacgtggacctcaggtgttggggccctcaatt
tatcagcaggcttcaacccattcacaggcctttcctgcatctcaaagtttgtttcatggg
actgactcaacccaccatggctctgcatcccgccagcccttccaaggtcaacctcactct
ccaagggctggagctattgtgtgcattggagcctacaagcagtacaaactctgcaacaca
aatatgtgtcctgaaagcagcagaaatatcagagaggtacagtgtgcatcatacaacaac
aaaccatttatgggtcgattttatgagtgggaaccttttgcagaagtgaagggaagtcag
aagtgtgaactgaattgccgagcaataggctaccggttctacgtgagacaagctgaaaaa
gtaatagacggcacgccatgtgatcaaaatggaactgcagtctgtgtgtctgggcaatgc
aagagcattggctgtgatgactacctgggctcagacaaggtggctgacaaatgcggaata
tgcggaggggacaacactggttgcaaggtggtctctggcgttttcaaacacacgctaaca
aatcttggctaccacaaaatagtagaaattcctgaaggggctattaaaatcaacattacc
gagatgtccaagagcaacaactacttggcactgcggagtcgatcaggacggtccatcatc
aatggaaactgggcaattgatcgacccgggagatatgaaggaggagggactacattcaca
tataaacgtccaaatgaaatctcaagcactgcaggggagtcctttttagcagacggtccg
acagacgagatcctggatgtctatatgatacatcagcaacctaacccaggtatacattac
gagtatatcattccagaagccaatgtcattagccctcagttgcctcctcacagaaggcca
ggggagccattcaatggtcagttagaactgacagatggtacagatcacgaagatgggaat
ttgcatagggagacagacactcacactggacagtcaacagggacctttcctgttattcag
ccaggaaggtttccttctcatcagccagacaaccaggtgcctgctgtgcagccaccacga
cgaaaccgagaacacaactggaaacaggttggaacaactgagtgcaccacttcgtgtggg
aaagggttgcgatacccaatcttccactgtgtaaacagaatatctcatgaggaggtgtct
gagagctattgtgacaccagcaccaagcccacgccagaagaagaagcctgcaacatcttc
ccatgcccagccttctgggatataggggagtggtctgagtgcagtaaaacatgtggcctt
ggtatgcagcaccgacaagtcctgtgccgacaagtgtatgccaatcgtactctgatggtt
cagcaataccgatgccatcacttggagaagccagaaacaaccagcacatgccagctgaag
atttgcagtgaatggcaaattcagacagagtggacttcgtgttcggtgccatgtggagtg
gggcagaggacccgagatgttaagtgtgtcagcaatcttggagacattgttgatgacgag
gagtgtaatatgaagctacggccaaatgacattgaaaactgtgacatggggccctgtgct
aagagctggttcctcacggagtggagtgacaggtgttctgcagaatgtggtgcgggagtc
cgaacacggtcagtagtttgtatgtccaaccatgttagcagcttgccactggagggttgt
gggaataacagaccctctgaaacaatcccctgtgacaatggaccctgtgtgggtaaagtg
gagtggtttgctggaagctggagtcagtgttcaattgaatgtggcagcggaacccaacag
agagaagtcatttgtattagaaaaacagaaggcagttttgatgtgttgaacccttatgaa
tgttcatttttggaaagacctcccagccagcagtcctgctacctcaaaccctgtggggct
aagtggtttaatacagagtggagcacatgttccaaatcctgtgaaggaggattccgggtt
cgagaagtacgatgtctgtcagatgatctgacacccagtaaccaatgtgatccacagctt
aaaccagaagaaaaagaaccttgtaacactcaggattgtataccagaaatagatgaaaat
tgcaaagacaaatactacaactgcaatgtggtggtgcaggcccgtctctgtgtctatacc
tattacaagacagcttgttgtgcatcctgcacaagggtggccaatagacaatcaggtttt
ctaggacgcagataa
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