Chrysemys picta (western painted turtle): 101951540
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Entry
101951540 CDS
T04662
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101951540 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpic00536
]
101951540 (SLIT2)
Glycosaminoglycan binding proteins [BR:
cpic00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101951540 (SLIT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
hEGF
LRRCT
LRR_1
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_Teneurin
EGF_TGFA-like
Motif
Other DBs
NCBI-GeneID:
101951540
NCBI-ProteinID:
XP_065454248
LinkDB
All DBs
Position
5:complement(110896103..111333308)
Genome browser
AA seq
1578 aa
AA seq
DB search
MLQGSAAVQSRWRRMGGFGRLSLGLVLVVILSEVAPQPCPAQCSCSGSTVDCHGLALRSV
PRNIPRNTERLDLNGNNITRITKTDFTGLRHLRVLQLMENKISTIERGAFQDLKELERLR
LNRNNLQLLSELLFLGTPKLYRLCTWLGVEQLQSVTVGKIRGVKAGRRLQGPGMILQPAH
GDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLS
VASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQ
KREFVCSGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNS
IKVIPPGAFSPYKKLRRIDLSNNQISETAPDAFQGLRSLNSLVLYGNKITELPKGLFEGL
FSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLHLAQNP
FICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQYFIPGTED
YRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHVPQYTAELRLNNNEFTVLEAT
GIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNELLLTSNRLETIRHKMFKGLESLKTL
MLRSNRISCIGNDSFTGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCH
LAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCPAEC
TCLDTVVRCSNKGLKVLPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRIST
LSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSAL
SHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPV
DVNILAKCSPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDIPIHACISNPCQHGGT
CHLKEGEKDGFWCTCADGFEGENCEVNVDDCEDNDCENNSTCVDGINNYTCLCPPEYTGE
LCEEKLDFCAQDLNPCQHDSKCILTPKGYKCDCTPGYVGEHCDIDYDDCQDNKCKNGAQC
TDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNYECQNGAQCIIKINEPICQCLSGY
QGDKCEKLVSVNFVNKESYLQIPSSKVRPQTNITLQIATDEDSGILLYKGDRDHIAVELY
RGRVRVSYDTGSYPASAIYSVETINDGNFHIVELLAMDQILSLSVDGGSPKIITNLSKQS
TLNVDSPLYVGGMPVKNNVAALRQSPGQNGTSFHGCIRNLYINSELQDFRNVPLQVGILP
GCEPCHKKVCVHGTCHATSQSGFTCECEGGWTGPLCDQQTNDPCLGNKCVHGTCLPINAF
SYSCKCLQGHGGVLCDEEEELFNPCQSIRCKHGKCRLSGLGKPYCECSSGYTGDSCDKEI
SCRGERIRDYYQKQQGYAACQTTKKVSRLECKGGCSSGQCCGPLRSKRRKYSFECTDGSS
FVDEVEKVVKCGCTKCPS
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgctccagggctcggcggcggtgcaatctcggtggcggaggatgggcggcttcgggagg
ctctccctggggctcgtgctggtggtgatcctgagcgaggtggcgccgcagccctgcccg
gctcagtgctcctgttccggcagcaccgtggactgtcacgggctggcgctgcggagcgtc
ccgaggaacatcccccgcaacactgaaaggctggaccttaatggaaataatatcacaaga
atcaccaagactgactttactggcctaagacaccttcgagtccttcagctcatggagaac
aagattagcaccattgaaaggggagcattccaggatctaaaagagctggagaggctgcgt
ctaaacagaaataatcttcagctgctttctgagttgctgtttctggggactcctaaacta
tacaggctatgcacctggctgggtgtggagcagctccagagtgtgactgttgggaagatc
agaggagtaaaagcaggaaggagactccagggacctggaatgatcctacaaccagctcat
ggtgatctcagtgaaaatcaaattcaagcaattccaaggaaggctttccgtggggccgta
gatattaaaaatttgcaactggattacaaccagatcagctgtattgaagatggggcattt
agggctctacgcgacctggaagtgctcactctcaacaataacaacatcactcgactttca
gtggcaagtttcaaccacatgcccaaactcagaacctttcgacttcactcgaataatctc
tactgtgattgccacctggcttggctatccgattggctgcggcagcgaccccgagttggc
ctgtacacacagtgtatgggcccatcccacctgaggggacacaatgtagcagaggttcaa
aaacgagaatttgtctgcagtggtcatcagtcttttatggctccctcctgcagcgtcttg
cattgtcctactgcatgtacctgtagtaacaacattgttgactgtcgtgggaaaggcctt
actgagatcccaaccaatcttccagaaactattactgaaatacggttggagcaaaattca
atcaaggtcatccctcctggagctttctcaccatataaaaagcttcgaagaattgacctg
agcaataaccagatctctgagacagctccagatgctttccaaggcctgcgttcactcaat
tcacttgtcctctatggaaataaaattacagaacttccaaaaggcctgtttgaaggactc
ttctctttacaattgctattattaaatgccaacaagataaattgcctacgagtagatgct
ttccaagatctacacaacctgaaccttctctctttgtatgataacaagcttcaaaccatt
gctaaaggcaccttttcacccctacgggcaattcagactttgcatttggctcagaaccca
tttatttgtgactgccatctgaagtggctggcggattatcttcatacaaaccctattgag
accagtggtgcccgttgcaccagcccccgccgtctggcaaacaaaaggattggccagatc
aaaagcaagaaattccgctgctcagctaaagaacagtatttcattccaggcaccgaagat
tacagatcaaaactaagtggagactgctttgcagatctggcttgccctgaaaaatgccgc
tgtgaaggaaccacagtggactgctccaatcagaagctcaacaaaattcctgaccacgtc
ccccaatacacagcagagttgagactaaataacaatgaattcacagtgttagaggcgact
gggatctttaagaagcttcctcagctgcgtaaaataaatctgagcaataacaagatcaca
gatattgaagaaggagcatttgaaggagcatctggtgtgaatgaactgttgctcaccagt
aaccgtttggagactattcgacacaagatgtttaaaggcctagaaagtctcaaaacatta
atgctaaggagcaatcgcataagctgtataggcaatgatagtttcacaggactgagttct
gtccgtttgctctccttatatgacaaccaaattactacagttgctccaggtgcctttgat
actctccattcactctctacattaaacctgctggccaatcctttcaactgtaactgccac
ctggcgtggctgggagattggctgaggaagaaacgcattgtaactggaaaccctcgctgt
cagaaaccctacttcctaaaagagattcccatccaggatgtggcaattcaagattttact
tgtgatgatgggaatgatgacaacagttgctctccattgtctcgctgtcccgcagaatgt
acttgcctagatactgtggttcgctgcagcaacaaaggtcttaaggttttgcccaaaggc
atcccaaaagatgtaactgaactttatttggatggaaaccagtttacccttgttcccaag
gaactttctaactacaaacatttaacacttatagatttaagtaacaacagaatcagcact
ctttctaaccagagcttcagcaacatgactcagctgctcaccttaattcttagttacaac
cgtctgaggtgtatccctgcacggacatttgatgggttgaaatcacttaggttactgtct
ttacatggcaatgatatttcagttgttcctgaaggagcttttaatgatctttcagcatta
tcacatcttgctattggagcaaatcctctgtactgtgattgtaacatgcaatggttgtcc
gactgggtaaagtcagaatacaaagaacccggtattgcacgttgtgctggtcctggagaa
atggcagataaactacttctcacaactccatctaaaaaatttacttgccaagggcctgtg
gatgttaatatacttgctaagtgtagtccctgcttatcaaatccatgtaaaaatgatggc
acttgtaacaatgatcctgttgacttctacagatgtacctgcccatatggtttcaagggc
caggactgcgatattccaattcatgcctgcatcagtaacccttgccaacatggtggaact
tgccatttaaaagaaggagaaaaagatggattctggtgcacttgtgcagatggatttgaa
ggtgaaaactgtgaagtgaatgttgatgactgcgaagacaatgactgtgaaaataattct
acctgtgtagatggaattaacaactacacttgcctttgcccacctgaatatactggtgag
ttgtgtgaggagaaactagatttctgtgcccaagacttgaacccttgtcaacatgactca
aagtgcatcctgacacccaaaggatacaaatgtgattgcacacctggatatgtaggagaa
cactgtgatattgactatgatgactgtcaagacaacaagtgtaaaaatggagcacagtgt
actgatgcagtgaatgggtatacatgtatatgcccggaagggtacagtggccttttttgt
gagttttcaccaccaatggttctccctcgcaccagcccttgtgataactatgagtgtcag
aatggagctcagtgcatcataaaaataaatgaaccgatatgtcagtgtttgtcaggttac
cagggtgacaaatgcgaaaagctggttagcgtaaactttgtgaacaaagaatcctacttg
caaattccttcaagcaaggtccgccctcagaccaacatcactctgcagattgccacagat
gaggacagtggaatcctgctgtacaaaggtgacagagatcatatagcagtggagctgtac
cgtggtcgagtgagggtcagttatgacaccggatcttatccagcatctgccatttacagc
gttgagacaataaatgatgggaatttccacatagtggagctgctagccatggatcagatt
ctatctttgtctgttgatggaggaagtcccaagatcattaccaacttgtctaagcaatca
actctgaatgttgactccccactttatgtaggaggcatgcctgtgaaaaacaatgttgca
gcactgcgccagtctccaggccagaatggcaccagcttccatggctgcatccgtaatctg
tacatcaatagcgaactgcaggactttagaaatgtgccactgcaagtgggaattcttcct
ggttgtgagccctgtcacaagaaagtgtgtgtgcatggaacctgccatgctacgagccag
tcaggctttacctgcgagtgtgaaggaggatggactggaccgctgtgtgatcagcaaacc
aatgacccttgtcttggaaataaatgtgtacatggtacctgcttgccaatcaatgcattt
tcatacagttgtaaatgcctgcagggacatgggggagtcctctgtgatgaagaggaagag
ttgtttaacccctgccagtccatcaggtgtaaacatggaaaatgcaggctttccggcctt
gggaaaccatattgcgaatgcagcagtggatacactggggacagctgtgataaagaaatc
tcttgtcgaggggaacgaatcagagattactaccaaaagcagcaagggtatgccgcgtgc
cagacgaccaagaaggtatcgagactagaatgtaaaggaggatgttcaagtgggcagtgc
tgcggaccactaaggagcaagagacggaaatattcttttgaatgcactgatgggtcctca
tttgtggacgaggttgagaaggtggtgaagtgtggctgtacaaagtgcccctcctaa
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