Chrysemys picta (western painted turtle): 101951719
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Entry
101951719 CDS
T04662
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpic03041
]
101951719 (DDX20)
Enzymes [BR:
cpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101951719 (DDX20)
Spliceosome [BR:
cpic03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
101951719 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
101951719
NCBI-ProteinID:
XP_008169958
UniProt:
A0A8C3I9M1
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Position
17:complement(22550410..22560307)
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AA seq
788 aa
AA seq
DB search
MMAAPVSAPPAPAEPRLRTRDVLIPGGPADFGSLLLSAPVLAGLEAAGFLRPSPVQLKAI
PLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENPATQILVLAPTREIAVQIHAVITTI
GIKMEGLECHVFIGGTPLNQDKMRLKKCHIAVGSPGRIKQLIELDCLNTASIRLFILDEA
DKLLEEGSFQEQVNWIYSSLPANKQMLAVSATYPESLANALTRYMRDPTFVRLNPTDPSL
IGLKQYYKIVNSHSLPHKTFEEKAQHLQELFSKIPFNQALVFSNLHSRAQHLAEVLTSKG
FPAECISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPLDWETY
MHRIGRAGRFGTLGLAVTYCCRGEEENMMMKIAQKCNLQLLPLPEPVPTGLMEQFAQWDV
EVTAIAHADASVNAHILTHERPEESMHHTHINNCAQIPQCDPAVPGENSSMSKPRRVSKQ
KQLLKGCPDHANTVKTSKSPKTLNFNTQQRNQMATACKTTEQNVDQHLDKETLKNTLPKI
PCLSSFKNPQPPIPWSFAEFVEDYEYFIKEGLEKRVEIIRSYTGPGEQYQHPKNGAFEKK
GMEETMHSVADSVSFGDTDSDSNSYSSRASSHSRGNKSYFEASSDTQERGSDVLIIDQAP
LNYSQSVSCSMGPVEHQQMPQIQKHSQVKKKVVKQNSKRCKKSHHQQSPSPPKRGAQEDC
SYSTQDESSPGFPYETQNYEEYWKSYYRTWQSYYASHSYYRKFHRQFNWMTAYHANSVYL
QELLKSDW
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggctcctgtctcggctccgccggctcccgccgagccccggcttcgcacgcgg
gacgtgctgatccctggaggcccggcggacttcgggtcgctgctgctgtcggccccggtg
ctggcggggctggaggccgccgggttcttgaggccttccccggtgcagctgaaggccatt
ccgctggggcgctgcggcctggatctcattgtgcaggcaaaatctggcactggcaaaacc
tgtgtgttctcgaccattgccctcgattccctcatactggaaaacccggcaacccagatc
ctggtcttagctcctacaagagaaattgcagtgcagattcatgctgttatcacaactatt
ggaatcaaaatggagggcttggaatgtcatgtcttcatcggagggactcctttgaaccaa
gacaaaatgagactaaaaaagtgtcacatagctgtaggctctccaggtcgaataaagcaa
ctcatagaattggactgtctgaatacagccagtatccgccttttcattcttgatgaagct
gacaagcttctggaagaaggcagcttccaggaacaagtcaactggatttattcttctttg
ccagccaacaaacagatgctggctgtttctgctacctaccctgaatcattggctaatgct
ttgaccaggtacatgagagaccctacctttgtgaggttgaaccccactgacccaagtctc
attgggctgaagcaatattacaaaattgtgaattctcattcacttcctcataagactttt
gaggagaaggcgcagcacttgcaggagctcttcagcaagattccatttaatcaggccttg
gtcttctcaaatctgcatagcagggctcaacacctggctgaagtactgacatccaaaggt
tttcctgctgagtgcatttcaggaagtatgaatcagaaccagcgtcttgatgctatggct
aaattgaagcagttccattgtagagtcctgatttccacagacttaacttctcgtggaatt
gatgctgagaaggtgaatcttgtcatcaacttggatgtgcctttggactgggaaacgtac
atgcatcggattggcagagctggacgctttggaaccttaggcctagctgtgacatactgt
tgccgtggggaggaagagaatatgatgatgaaaattgcacagaaatgtaatcttcagctc
cttcctttaccagaacctgtacccactggattgatggagcaatttgcacagtgggatgta
gaggtcaccgctattgcccacgcagatgcttcagtgaatgctcatatcttgacccatgaa
agaccagaggagtcaatgcaccacacacacataaataactgtgctcagataccccaatgt
gatcctgctgttccaggtgaaaattcctccatgtccaagccaagaagggtttcgaaacag
aagcagcttctaaaaggctgcccagatcatgcaaatacagtaaaaactagcaagagtcca
aagacattaaacttcaacacacagcagagaaatcaaatggcaacagcttgcaaaaccact
gaacaaaatgttgatcagcatctggacaaggaaaccttaaaaaatacactccccaaaatt
ccttgcctgtcatcgtttaagaacccacagcctcccattccatggagctttgcagagttt
gttgaagactatgaatactttattaaagaagggttggagaaaagggttgaaatcataaga
agttacacaggccctggagagcagtaccagcaccctaaaaatggtgcttttgaaaagaaa
gggatggaagagactatgcactcagtagcagacagtgtctcatttggggacactgatagt
gatagtaactcgtacagttccagagcttcctctcatagtaggggaaacaagtcatacttt
gaagcctcttcagatactcaagagagaggaagtgatgtgctcattatagatcaagctcct
ctaaactattcccaaagcgtaagctgctccatgggcccagtggagcaccaacagatgcca
caaatccaaaagcacagtcaggtgaaaaagaaggtggtgaaacaaaattccaaacgatgt
aagaaaagccaccaccaacaatcccccagtcctccaaagagaggagcccaggaagactgt
tcatacagcactcaggatgagagctctcctggctttccctatgagactcagaattatgaa
gaatactggaagtcctattaccgaacatggcagagttattatgcttctcactcttactat
aggaaatttcataggcaatttaactggatgactgcttatcacgccaactctgtctatctt
caggaactgttgaagagtgattggtga
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