Chrysemys picta (western painted turtle): 101952006
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Entry
101952006 CDS
T04662
Symbol
PALS1
Name
(RefSeq) protein PALS1 isoform X1
KO
K06091
MAGUK p55 subfamily member 5
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04519
Cadherin signaling
cpic04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
101952006 (PALS1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101952006 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpic04990
]
101952006 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
cpic04990
]
PDZ domain-containing proteins
MAGUK family proteins
101952006 (PALS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
L27
PDZ_6
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
101952006
NCBI-ProteinID:
XP_005306746
UniProt:
A0A8C3FKV3
LinkDB
All DBs
Position
4:86164633..86295234
Genome browser
AA seq
675 aa
AA seq
DB search
MTTSHMNGHVTEDSDNETKNVELASPEEPQKHREMAVDCPGDLGSRMMPVRRSAQLERIR
QQQEDMRRRREEEGKKQELDLTASMRLKKLAQIPPKTGIDNPMFDTEEGVILESPHYAVK
ILEVEELLASLKHIQHTLVDPQSQEDLSLILQLVQNTDFQNAFKIHNAVTVHMNKASPPY
PLISNAQELAQEVQCVLKPSHQKDGQELSALLNAPHIQALLLAHDKVAEQEMQPEPVTNE
KVYENFGLYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQSKPPPAKETVMHVKAHFDYDPSD
DPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKR
PIVLIGPQNCGQNELRQRLMNNEVDRFAAAVPHTTRSRRENEVAGRDYHFISRQAFETDI
AAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLNLHTQSLKTLRNSDLKPYIIFIAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN
KLDTEPQWVPSTWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttctcatatgaatggacatgttacagaagattctgacaatgaaacaaaaaat
gtggagcttgcatctcctgaggaacctcagaagcacagagagatggctgttgattgccct
ggggatttgggctccaggatgatgccagtacgacgaagtgctcaacttgagcggattcgc
cagcaacaggaggacatgaggcgcaggcgagaagaagaaggaaagaaacaagaattagac
cttactgcttcaatgaggcttaagaaactagcgcagattcctcccaaaactggaatagat
aatcctatgtttgacacagaagaaggagtcattctggagagtcctcattacgctgtaaaa
atactagaagtggaagagctgttagcttctcttaagcatatccaacacactttggtagac
ccccagagccaagaggatctctctctcattttacaacttgtccaaaatactgattttcag
aatgcatttaagatacataatgctgtcacagtgcacatgaacaaggccagccctccgtat
cctcttatctccaatgcacaagagctagcacaagaggtacagtgtgttttgaaacccagt
caccagaaagatgggcaggagcttagtgctttgctgaatgcccctcacattcaggcactt
ttattagctcatgataaggttgcagagcaagaaatgcagccagagccagtgacaaatgaa
aaggtttatgagaactttggcctgtatggaggggagacagtgaaaatagttcgcattgag
aaggcacgagatattccattgggtgctacagtgcgcaatgaaatggattctgtcatcatt
agtcgaatagtgaaagggggagctgcagagaagagtgggttattacatgaaggggatgaa
gttctggaaataaatggcattgagattcgtggaaaagatgttaatgaagtttttgacttg
ctggctgacatgcatggcactctgacgtttgtgctgatacccagtcaacagagcaagccg
cctcctgccaaggagacagttatgcacgtgaaagcacattttgactatgatccttctgat
gatccttatgtaccttgccgagagttaggtctgtcttttcaaaagggagatatactccat
gtgatcagccaagaagatccaaactggtggcaggcctaccgagatggagatgaagacaat
cagcctttggcaggccttatcccaggaaagagctttcaacagcaaagagaagcaatgaag
caaaccatagaagaagacaaggagccagagaaatcaggaaaactctggtgtgcaaagaaa
aataaaaagaaacggaaaaaagttttgtacaatgccaataaaaatgacgattatgacaat
gaagaaattttaacctatgaggaaatgtcactgtatcaccagccagcaaataggaaaagg
cccattgtcctgattggcccacagaactgcggccagaatgaactacgtcagagactaatg
aataatgaagtagatcgctttgcagctgcagttcctcataccactcggagtaggcgagag
aatgaagtagctggcagagattaccatttcatctcacggcaggcatttgagactgacata
gctgcagggaaatttattgagcatggcgagtttgagaagaatctgtatggtaccagcata
gactctgtgcggcaagtcatcaactctggcaagatatgccttttaaatctccatacacag
tcattgaagaccctacgcaattcagacttgaaaccatatattatcttcattgcaccacct
tcgcaagagcggctacgtgctttattggccaaagagggtaaaaatccaaagccagaagaa
ctaagagaaatcatagagaagaccagagagatggaacagaacaatggccactactttgac
actgcgattgtgaattctgatcttgataaggcatatcaggagctacttcgtttaataaac
aaacttgacacggaacctcagtgggtgccatccacctggttacggtga
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