Chrysemys picta (western painted turtle): 101952041
Help
Entry
101952041 CDS
T04662
Name
(RefSeq) NFX1-type zinc finger-containing protein 1-like
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101952041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
Viral_helicase1
AAA_16
nSTAND3
DEAD
UvrD-helicase
AAA_22
AAA_5
PhoH
ATPase
Motif
Other DBs
NCBI-GeneID:
101952041
NCBI-ProteinID:
XP_042717233
LinkDB
All DBs
Position
Unknown
AA seq
1849 aa
AA seq
DB search
MSGQKRMWPDWPDSAWELVPPKTARLSPEPGPSWRTDPCAILTDLGKLCDHSPQQLLPFL
LDHDYQLEQVVESPGLSPARVYTLLRALKVAVECAGEPEQVQPVLALALRPAFVLRSLLG
FIAELESFQHQDGQISQEVMEDTVAALHHLLTASPEQTKTLLCYPVDLLFATVQRLQSRG
FQFTWIIQKRLHDTKSLVDSAFPRCSAPLASPACREDFHAIPIFPTPEEIFVDPGQKLKR
NLPVGKYASDAAYLDTHFRLLREDFVRPLRAGISAHFSLQNVFGGAGKQRGALRLYRNVQ
LVKVGTSPAGAMYMARFQAPQGSAHASSKRLLSGSLTCLISSDCGQVLFGTVVGGNRPQL
LKGAVWLDIKANHSDLLTRHLGKTNFIMVESPAFFESYRHVLEGLQELDPARVPFQSYVV
QCRTPVAPPAHFGEDVTFDLSVLQPTGRADKEPMGDTSEGHVTAVDLTAVRPCDTYMWSP
ETFPHLDESQILAIRMALTREFVLIQGPPGTGKTFIGLQIVEILLRNQSQWWKDQRPFLV
VCYTNHALDQFMEGILQFQPSGVVRIGGRSRSDKVAACSLRNLRQQQLPALLGAAEKHQY
GWMRKALQKQKESIAYRTAVLELLRRGILTDTELAAEIRDDNLDCSWRAGRFDMCDWLKI
YPVAQEEKPSQAQGGGRKAGAEEELWPCHRDERALDDEDDLDPSEWRRSTVEEKFAYILP
AEGSSSHQGIRKCLEEGDIMTDEDVANVRDVWELRLRDRWCLYRRWMLAYERELKETLVE
KLKEYEKKAAQLAELTFQEDLWVLKRSRVIGMTTTGAAKYRKLLQKIQPHTVIVEEAAEI
LEAHVLTCLTPACKHLILIGDHQQLRPKPADYTLEKKYFLGISLFERMINNQIPYVQLLY
QHRMRPEISQLLVPLFYKQLKDHDAVAEYEQIKGVESSVFFIQHTAAESNSADSESYSNR
FEAAFLVSLSRYLLDQGYHESQVTVLTPYHGQVLKIRTLMRSRDMGDVAVHAVDDFQGEE
NDIVLLSLVRSNREGRIGFLQDKNRLCVALSRARKGFYCIGNLAGIAAGSNSQLWKDILR
LLKRKKLTGEGLTLVCQNHPDTKTVVKESSDFSKIPDGGCTLQCQIRLECGHPCTRRCHP
YDRDHSLYVCQFQCSKLCELNHRCPRKCKEPCEPCSVEVEKVIPKCGHLQTVPCHMPADH
WLCQEPCKQLLECKHPCTRRCGEACSTCRCKEMIDITLPCSHVMRTECYKQKMPPICLET
CNQKLECGHHCKGNCYECVQGRLHVHCRNKCTRVLLCSHQCQESCFENCPPCKRQCPNQC
RHSRCDKPCGEICFPCIQPCSWKCRHYRCTQLCSETCNRPRCSEPCQKSLKCSHPCAGLC
GEPCPPKCRTCHRDELAEIFFGAEDELDARFVVLEDCGHILEVQGLDRWMDGEPDNAQAQ
HVQLKVCPKCATPIQHNTRYNNVIKAIQQKIKEIKLKIQGNREELEAGKQQLLLRLNSDR
DLVAWAGMERSILNTVSRQSLLDLENSLNFFASLSRLKQQAKKCTAARERNLKRKIEAVE
HWIGRNRHAFTAQQLRECRNEIKRISYLGNIFERLSGYENKQASPEALALANEAIGVLQR
QDPFTQSREESLQRVLEKIDEWLPAAGLQLSEAERVMVTEAMQFGRGHWYRCPQGHLYTI
GECGRPMQQSTCPECGATIGGQNHALTRDNIADDQILEPASAQEREPRLQDSILALPSSS
DQPWSPTCCPPSPHPQPDSPPPRPPSPHPQVVSSPPRPPSPHPQPDSPIQLPMPASLANP
TLPQPPLPAGLANPLAAVRPRQPRTQARGRAKQEPYSLRHRAARQGNRC
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtctggccagaagaggatgtggccggactggcctgacagcgcctgggagctggtgcca
ccgaaaactgcccggctctccccggagccagggcccagctggaggacggatccttgcgcc
atcctcactgacttgggaaagctctgtgaccacagcccccagcaactcctacccttcctg
ctggaccacgactaccagctggagcaggtcgtggagagccccggcctgagccccgccagg
gtgtatacgctgctgcgggccctgaaggtggcggtggagtgcgctggtgagccggagcag
gtccagccggtcctggctctggcgctgagaccagctttcgtgcttaggagtctgctgggt
ttcattgccgagctggagagcttccagcaccaggatgggcagatctcccaggaggtgatg
gaggacacggtggctgccctgcaccatctgctgacggcgtcccccgagcagacaaagacc
ctcctctgctaccctgtggaccttctcttcgccaccgtccagagactccagagccgcggc
tttcagtttacatggatcatccagaaacggcttcacgacaccaagagcctggtggactcg
gccttcccgcggtgcagtgcgcccctcgcctcgccagcctgccgggaggatttccacgcc
atccccatcttcccaaccccggaggagatatttgtggaccctgggcagaagctgaagcgc
aacctccccgttgggaagtacgcgagcgacgcggcctacctggacacgcacttccgcctg
ctgcgggaggatttcgtccggcccctgagggccgggatctcggctcacttctccctgcag
aacgtgttcgggggcgctgggaagcagaggggggcgctgcggctctataggaacgtgcag
ctggtgaaggtgggcacctccccagctggtgccatgtacatggccaggttccaggccccg
cagggctccgcccacgcctcctccaaacggctgctgagcggctccctgacctgcctcatc
tccagcgactgtggccaggtgttgtttgggaccgtggtggggggcaacaggcctcagctc
ctgaagggggccgtgtggttggacattaaggcaaaccacagcgatctcctgacgaggcac
ctggggaaaaccaacttcatcatggtggagtcgccggccttcttcgagtcctaccggcac
gtgctggaggggctgcaggagctggaccccgcccgggtgccgttccagagctacgtcgtg
cagtgccgcacccccgtcgccccacccgcgcactttggagaggacgtgacctttgacctc
tctgttctgcaacccactgggcgagcggacaaagagcccatgggggacacatctgagggg
cacgtgaccgcggtggacctgacggccgtgagaccttgcgacacctatatgtggtctcca
gagacatttcctcacttagatgagtctcagatcttggccattcgaatggccctgaccagg
gaatttgtgctgattcagggcccacctgggacaggcaaaaccttcattgggctgcagatc
gtggagatcctgttgaggaatcagtctcagtggtggaaggaccagagacccttcctggtc
gtctgctacacaaaccatgctctggaccaatttatggaagggatcctgcagttccagccc
tccggcgtggtgcgcattgggggaaggagcagaagcgacaaggtggcagcgtgctccttg
aggaaccttcgccaacagcagctgccagcgctcctgggggccgcggagaagcaccagtat
ggctggatgcggaaggccttgcagaagcagaaggagagcatcgcctaccgcaccgcggtg
ctggagctcctccgccgagggatcctcacggacacagagctggcagcggagatccgcgat
gacaacctggattgctcctggagagcggggcgcttcgacatgtgcgactggctgaagatc
taccccgtggcgcaggaggagaagccgtcccaggctcagggcgggggcaggaaggcaggc
gcggaggaagagctctggccgtgccacagggatgagcgggccctggatgacgaggacgat
ttggacccttccgagtggcggcggagcacagtggaggagaagtttgcttacatcctcccc
gccgagggcagctcctcacaccaagggatacgcaaatgcttggaggagggtgacatcatg
accgacgaggacgtcgcgaacgtgagagacgtctgggagctgcggctgagggatcgctgg
tgtctctacaggagatggatgctggcctacgagcgtgagctgaaggagacgctggtggag
aagctgaaggagtacgagaagaaggcagcccagctagcggagctgaccttccaggaggac
ctgtgggtgctgaaacgaagccgggtcattggcatgacgacaacaggggctgccaagtac
cgaaagctcttgcagaaaatccagccccacactgtgattgtggaagaggcagcagagatc
ctggaagctcacgttctaacctgcctcacgccggcctgcaagcacctcatcctgattgga
gatcaccagcagctgcggcccaaacccgccgattacaccttggagaagaagtatttcctc
ggcatctccctgttcgagcgcatgataaataatcagatcccctatgtgcagctgctctat
cagcaccgcatgcgcccagagatttcccagctgctggtgccgctcttttacaaacagctc
aaagaccacgatgccgttgctgaatacgaacagatcaagggcgtggagagcagtgtcttc
ttcatccagcacacagcggccgagagcaacagcgctgactccgagagctacagcaacagg
tttgaggctgccttcctggtctcgctgagcagatacctcctagatcagggataccacgag
agccaagtcaccgttctgaccccctaccacggccaggtgctgaaaatccgcacgctgatg
aggagcagggacatgggagacgtggctgtccatgccgtggatgactttcaaggggaggag
aatgacatcgttcttctctcgctggtacgaagcaacagagaagggaggattggtttcctc
caggataaaaatcggctctgtgtggctctctcacgggccaggaagggcttctattgcatt
ggaaacctcgctggcattgcagctggctccaacagccaactgtggaaagatattctacgt
ctcctaaagagaaagaaacttacgggggaaggcctgacgctggtgtgtcaaaatcacccc
gataccaagacagtggtgaaggagagttcggacttcagtaaaatccctgacggaggctgc
acgctccagtgccaaatccgtctggaatgcggccacccctgcacgcgccgctgccacccg
tacgacagggatcacagcctgtacgtttgccagttccagtgctccaagctgtgtgagctc
aaccacaggtgtccgagaaagtgcaaggaaccttgcgaaccttgttccgtggaagtggaa
aaagtcattccaaagtgtgggcacctccagaccgtcccctgtcacatgccagcggatcac
tggctctgccaggagccgtgcaagcagcttctggaatgcaaacacccatgcacacgccgc
tgtggggaagcctgcagcacctgcaggtgcaaggaaatgattgacatcactctgccctgt
tctcacgtaatgagaactgaatgctacaagcagaaaatgcctccgatctgccttgagaca
tgcaaccagaaactcgagtgtggacaccactgcaaaggaaactgctatgaatgcgtgcag
ggcaggctgcatgtccactgccgtaacaagtgcacgagggtccttctgtgttcccaccag
tgccaggaatcgtgttttgagaactgtcctccgtgcaagagacagtgccccaaccagtgc
agacacagccgctgtgataagccatgcggggagatctgttttccctgcatacagccctgt
tcctggaaatgcaggcactaccggtgcacacagctgtgctccgagacgtgcaatcgcccc
cgctgcagcgagccctgccaaaaatcactcaaatgcagccacccctgcgcaggcctctgt
ggagagccgtgtccgcccaagtgtcgcacgtgccacagagatgagctggccgagattttc
tttggggccgaagacgagctggatgcccgtttcgttgtcttagaagactgcggacacatt
ttggaggtgcagggcctggatcgctggatggacggcgagccagacaatgctcaggcccaa
cacgtccagctgaaggtgtgccccaaatgcgcgacacccatccagcataacacacgttac
aacaacgtgatcaaggccatccagcaaaaaatcaaggagatcaaattgaagattcaggga
aacagggaagaacttgaagctggaaagcagcaactgctccttcggctgaacagcgacaga
gacctcgtggcctgggcgggtatggaaagaagcattctgaacacggtctcccgtcagagc
cttctggacttggagaactccctaaatttctttgcaagtctctccagactgaagcaacaa
gcgaagaagtgcacagcggcgagagaacgcaatttgaaacggaagattgaggccgtggag
cactggatcggcagaaacagacacgccttcacagctcagcagctcagggaatgcaggaat
gagatcaagaggatatcgtacctgggaaacatctttgagcggctgagtggctacgaaaac
aaacaagcatcccccgaggccctggcccttgctaatgaagccataggcgtcctccagcgg
caggaccctttcacccagagtcgggaggaatctctccagagggtgctggagaagattgat
gagtggcttcctgcggcaggactgcagctctccgaggcagagcgggtcatggtaacagag
gccatgcaattcggcaggggccactggtacagatgccctcagggccatttgtacacgatt
ggggaatgcggccgtccaatgcagcagagcacctgccccgagtgtggagctaccattggg
gggcaaaaccacgctctcactcgggataacatcgccgacgatcaaatactggaacccgct
agcgcacaggagcgagaaccacgtctacaggatagcatcttagctctgcccagctccagc
gatcagccatggtcccccacctgctgcccgcccagcccccaccctcagccggactcacca
ccccctcgcccgcccagcccccaccctcaggtggtctcatcgccccctcgcccgcccagc
ccccaccctcaaccggactcaccaatccagctccccatgcctgccagccttgctaacccc
acactcccccagccccccctgccagctggccttgccaaccccctggctgctgtcaggccc
cgccagcctcgaacccaggcccgtgggcgtgccaagcaggagccgtactctttgcgccac
cgcgcggcaaggcagggaaaccgctgctaa
DBGET
integrated database retrieval system
