Chrysemys picta (western painted turtle): 101952135
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Entry
101952135 CDS
T04662
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101952135 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpic04121
]
101952135 (TRIM54)
Ubiquitin system [BR:
cpic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101952135 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
AAA_13
TRIM_CC
DUF1664
CoiA_N
Sina_RING
MRP-S23
GH123_cat
PAH_ZNF598
Hydro_N_hd
CYP38_PsbQ-like
FlgN
CagA
SpoIISA_toxin
Exonuc_VII_L
DUF349
Zn_ribbon_FGT1_2
Lys-AminoMut_A
DUF5799
PTPA
NAP
ApoLp-III
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
101952135
NCBI-ProteinID:
XP_005314719
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MNFAVGFKPMLGDSHSMDSLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSSSVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPLHAKA
EQQLMCDEHEDEKINIYCLSCEAPTCSLCKVFGAHKDCEVAPLPSVYKRQKSELSDGVAM
LVAGNDRIQAIVTQMEEICKAIEENSRRQKQHLSQRFDSLYSTLEERKKELVQRVSREQE
ERVSHVRSLIRQYGEHLESSAKLVESAIQAMEEPQMAAYLQQSKELLKKITDTSKVSMSS
RPEPGYEKMDHFSVNVDNLAEMLRTIEFQTDSQGEDDMDGFAGGDGGDAGADEDRPEGPE
ALEGAEAVGSRQKPASSPHGQH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgcggtgggattcaagcccatgctgggggattcgcacagcatggacagcctg
gagaagcagctgatctgccccatctgcctggagatgttcagcaagcccgtggtcatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaacgacatcttccaggcttccaacccg
ctgtggcagtcgcggggctcgagctcagtgtcgtcgggggggcggttccggtgcccctcc
tgccgccacgaggtcgtcctggaccggcacggcgtctacgggctgcaacgcaacctgctc
gtggagaacatcatcgacatctacaagcaggagtcgaccaggcccctgcacgccaaggca
gagcagcagctgatgtgcgatgaacacgaggatgagaagatcaacatctactgcctgagc
tgcgaggcacccacctgctccctgtgcaaggtgttcggggcccacaaggactgcgaggtg
gccccgctgcccagcgtctacaagcgccagaagagcgaactgagcgacggcgtcgccatg
ctggtggctgggaacgaccgcatccaggccatcgtgacccagatggaggagatctgcaag
gctatcgaggagaacagtcggcggcagaagcagcacctgagccagcgtttcgactccctc
tacagcaccctggaggagcgcaagaaggagctggtgcagcgcgtcagccgggagcaggag
gagcgggtcagccacgtgcgctccctcatccgccagtacggggagcacctggagagctcc
gccaagctggtggagtcggccatccaggccatggaggagccccagatggccgcgtacctg
cagcaatccaaggagctgcttaaaaagatcacggacacgtcgaaggtgtcaatgagtagc
cgcccggagcccggctacgagaagatggaccacttctctgtcaatgtggacaacctggcc
gagatgctgagaaccatcgaattccagacagactcgcagggtgaggacgacatggacggg
tttgcgggcggggatggaggagacgctggagccgacgaggacaggccggaggggccagag
gcgctagagggggccgaagcagtggggtccaggcagaagccagcgagctccccgcatggt
cagcactga
DBGET
integrated database retrieval system
