Chrysemys picta (western painted turtle): 101952683
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Entry
101952683 CDS
T04662
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04020
Calcium signaling pathway
cpic04080
Neuroactive ligand-receptor interaction
cpic04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101952683 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101952683 (GRIN2C)
04082 Neuroactive ligand signaling
101952683 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpic04040
]
101952683 (GRIN2C)
Ion channels [BR:
cpic04040
]
Ligand-gated channels
Glutamate (ionotropic)
101952683 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
101952683
NCBI-ProteinID:
XP_042697028
LinkDB
All DBs
Position
Unknown
AA seq
1386 aa
AA seq
DB search
MGRALTHTLVLSMVLGCSAVIMDLLLPSPGEPVVNVAVVFGGSSYPLHIRSRLTHQSFLD
LPLEIHPVTVIVNDTNPSTLLTQICNILASTKIHGIVFEDNIGTEAVAQILDFISSQTQV
PIISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGHNI
FVDVIRSFTDASYFGWELQDVLTFEMTQDGSNSKTQRLLRQVDAQVMIVYCSREEAVYLF
QVAEQAGLVGPGYIWIVPSLTVGNMEIPPVSFPVGLISVVTESWKMSLRQKVRDGVAIIA
TGAESYFRTHGYLPDVGKDCKTPPTTTANSTFYRHLLNVTWEHRDFSFNEGGYLVRPTMV
VISLNRHRLWEMVGKWEKGIIHMKYPVWPRYGSFLQPVSDNRHLTVATLEERPFVIVENT
DPASGVCVRNTVPCRKQTNYTDSGDGPVDPYTKLCCKGFCIDILKKLAKAVKFSYDLYLV
TNGKHGKIVRGIWNGMIGEVYYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARS
NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVGYNQNLTSGKKSGGPSFT
IGKSIWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYID
TVSGLSDKKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTSL
KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSKWKRPIDLALL
QFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHL
VYWKLRHSVPKSHKLDFLLAISRGIYSCFNGVQNLESPVRVRTPDVTANSAQVNVLKMLQ
AAKDMVSTATVGSSLENATRTIENWTNRSENLQTTFSLRTPQLVVQNTSVSNRPPYSSNM
ATTEKLGRDCAQRAVPPPISAPQQPFVDSRLPANENWRAVNEQPPILHPLKFRGSYSGDK
VLPGSTVGGFPHLLVRTMPPSHFGSHVPLGNHLSTPLSPLKTQRELPLPDIYKEHKRPVS
RGEEKEKLPPNVHLVYGEGGHGGPAQLAKLFSTSEKSPFLPPDCMHSSFSKADRPCRPLV
TVFKEPEPVELPLLGKEKPNRRASLLRSAWEQNEKHHSLGIRRYDGKSSARGDVPDLFPK
AGVALRQTPMYYPTEALRPSAMCNRKRVEANSRLPWKGQRLLHSQAARLPSYGEACLQNA
TGVHRASSTVVHKQYAYMNSYTNLPMYLGRLYQGPPPLCEHSRTSQRCVSRAPWAPRSRD
YLVQEDSRRTMYFDSMYRDCTERSRAEPSFLQMVNTERRDLLAAQRMNSPYAARSWRRIS
SLESEV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagctctgacgcacactctggtactgtccatggtgctgggctgttcagctgtc
ataatggatctcctgctgccaagccctggggagccagtggtaaacgtggccgtggtattc
gggggctcctcataccctctccacatccgcagccgtctgactcaccagagcttcctggac
ttgcctctggagatccacccggtcacggtgattgtgaacgacaccaaccccagcaccctc
ctgacccagatctgcaacatcctcgccagcaccaagatccacggcatcgtctttgaggac
aacatcggcacagaggctgtggcacagatcctggacttcatatcctcccagacacaagtc
cccatcatcagcatcagcgggggctctgccgtggtcctgacccccaaggagcccggctct
gccttcctgcagctgggagtctccattgagcagcagatccaggtgatcttcaaagtcctg
gaggaatatgactggggctcctttgcggtcatcaccagcctgtatccagggcacaacatc
tttgtggacgttatccgttccttcacagacgccagctactttggttgggaactccaggac
gtcctgacctttgagatgacccaagatgggagcaactccaaaacccagcggctgctacgg
caggtcgatgcccaggtgatgattgtgtactgctcgcgggaggaggctgtgtacctcttc
caggtggcggagcaggcgggcttggtcgggcccgggtacatctggattgtgcctagcctg
acggtggggaacatggagatcccgcctgtctctttccccgtcggcctcatcagcgtggtg
accgagagctggaagatgagcctgaggcagaaggttcgggacggcgtggccatcatagcc
acgggggctgagagctacttcaggacccacgggtacctcccagatgtgggcaaggactgt
aagacgccacctaccaccaccgctaacagcactttctacaggcacctgttgaacgtgacg
tgggagcacagggacttctccttcaatgaaggtggctacttggtgaggcccaccatggtg
gtgatctcactgaaccggcatcggctctgggagatggtggggaaatgggagaaggggatc
atccacatgaagtacccagtgtggccccgctatggctccttcctgcagcccgtgtcggac
aatcgccacctcacggtggccaccctcgaagagaggccctttgtgatcgtggagaacacg
gacccggcctctggcgtctgtgtgcgcaacaccgtcccctgccggaagcaaaccaactac
accgacagtggggatggacctgtggacccctacaccaaactctgctgcaagggcttctgc
attgatatcctgaagaagctggccaaggccgtgaagttctcctacgacctctacctggta
accaatggaaaacatgggaagatagtgcgtggcatctggaatggcatgattggcgaggtg
tactaccagcgagcggacatggccatagggtccctcaccatcaacgaggagcggtctgag
attgtggacttctctgtgccctttgtggagaccggcattagtgtcatggtggctagaagc
aatgggacagtctcgccttctgccttcctagagccctacagcccggcggtgtgggtgatg
atgttcgtgatgtgtctcactgtggttgccatcaccgtcttcatgttcgaatatttcagc
cccgtcggctacaaccagaatctaaccagcggcaaaaagtccggcgggccctccttcacc
attggcaaatctatctggctgctgtgggccctggtctttaataactcggtgcccattgag
aatccaaaaggcaccacaagtaagatcatggtgctgatctgggccttcttcgcagtgatc
ttcctggccagttacacagctaacctggcagcctttatgatccaggagcaatatattgac
accgtctctgggctgagtgacaagaagttccaacggccccaggagcagtatcccccattc
cgcttcggcaccgttcccaacggcagcacggagaggaacattcggagcaactatccagat
atgcacacgcacatggtgaaatacaaccagcgctcggtggaagatgccctgaccagcctc
aaaatggggaagctggacgcctttatctacgatgctgctgtgctgaattacatggccggc
aaggacgagggctgcaagctggtgaccattggcagcgggaaggtctttgctaccaccggc
tatggcattgctctgcagaaggattccaagtggaagaggccaattgacttggcgcttctg
cagttcctgggagatggggaaacccagaaactggagacagtctggctgtcggggatctgc
cagaatgagaagaatgaggtgatgagcagcaagctagacattgacaacatggccggggtc
ttctacatgctgttggtggccatggggttgagcctgctggtctttgcctgggagcacctg
gtgtactggaaactgcgccactctgtccccaagtcgcacaaacttgacttccttctggcc
ataagcaggggcatttatagctgtttcaatggagtccagaatctggagagccctgttcgt
gttcgcactcccgatgtcaccgctaactctgcccaagtcaacgtgctgaagatgctgcag
gctgccaaggacatggtgtcaacagccactgttgggagctcccttgagaatgccacgcgc
accatcgagaactggacgaaccggagcgaaaacctccagaccacgttctcccttagaact
cctcagcttgttgtccagaataccagtgtgtccaacaggccaccctactcctccaatatg
gccacaacagagaagctggggcgggactgtgcccagagggctgttccaccacccatctct
gctccccaacagccctttgtggactctaggctgccagctaatgaaaactggagggcggta
aatgagcaacctccaatacttcaccccttaaagtttagaggaagctattctggggataaa
gttcttccaggttccaccgtgggtggctttccgcacctcctggtgaggaccatgcctcca
tcccatttcgggagccacgtgcccctgggaaaccatcttagcactcccctctcaccactg
aaaactcaaagggagcttcccctcccagacatctacaaagagcacaagcgccctgtttcc
aggggagaggaaaaggagaagctcccaccaaatgttcacctggtgtatggggaaggagga
cacgggggcccagcccagctggcaaagctgttctccacttccgagaagagccctttcttg
cctcctgactgcatgcacagctccttctcaaaagccgacaggccttgcagacccttagtt
actgtgttcaaggaaccggaaccagtggagctacctcttctgggcaaggagaagccgaac
aggagagccagcctgctgaggtctgcctgggagcagaatgagaaacaccattccctaggc
atccggagatacgacggcaagtcttccgcccgaggagatgtgccagatctcttccccaaa
gccggtgtggcgctgaggcagacaccaatgtactatcccactgaagccctcaggcccagt
gctatgtgcaacagaaaacgcgtggaggcaaactccaggctcccttggaaaggacagcgg
ctcctgcactctcaggcggcgaggctgccctcttacggggaggcatgcctgcagaacgcc
actggcgtgcaccgggcctcctccaccgtggtgcacaaacagtacgcctacatgaactcc
tatacgaacctgcccatgtacttggggcggctttaccaggggcctcccccgctctgcgaa
cactccaggaccagccagcgctgtgtcagtcgggctccctgggcacccaggagcagggac
tacttggtccaagaggacagccggaggaccatgtactttgacagcatgtacagagactgt
acagagcgaagcagagcagagccgtccttcctccagatggtcaatacggagaggagggac
ctcctggcagcccagagaatgaacagtccttatgctgcccggtcctggagacgaatctct
agcctagagtccgaggtgtga
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