Chrysemys picta (western painted turtle): 101953460
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Entry
101953460 CDS
T04662
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpic03009
]
101953460 (DDX56)
Enzymes [BR:
cpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101953460 (DDX56)
Ribosome biogenesis [BR:
cpic03009
]
Eukaryotic type
Pre-60S particles
Helicases
101953460 (DDX56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
101953460
NCBI-ProteinID:
XP_008170140
UniProt:
A0A8C3IK20
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Position
2:102899373..102910271
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AA seq
559 aa
AA seq
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MEPEPSFAHMGLDGRLLQAIAELGWAKPTLIQEKAIPLALEGKDLLARARTGSGKTAAYA
IPLLQHLLQVKMSPLVTEQAVRGLVLVPTKELGQQVLQMIRQLTAYCSRDVRVADVSGQV
DMSAQRPILMEKPDVVVGTPSRVLAHLQGHSLSLRHSLEVLVLDEADLLFSFGFEEDLKN
LLCHFPKIYQSFLMSATFSEEVQALKELVLHNPVTLKLQESQLPEAAQLCQYQIRCAGEE
DKFLLLYALLKLGLVRGKAILFVSTVERGYRLKLFLEQFSIPACVLNAELPVQSRCHIIS
QFNRGFYDYIVATDEQVLAEPTVRAKRRKGAKGAKAEKGKDPEYGVARGIDFQNVATIIN
FDPPPSVESYIHRAGRTARADNPGTALTFVTHPECPLLAEIEEALAGESTEPVLRPYQFR
MEEVEGLRYRCRDAMRSVTKQAIKEARLREIKEELLNSEKLKTYFEDNPHDLRLLRHDRP
LHPAIIKPHLRNVPEYLVPPTLRAIAQPLLNKRKRRKHLAPSSSRPRGGFQARGGRNPLR
SFQYMGRRPRRPANKGKTS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagccgagcttcgcgcacatggggctggacgggcggctgctgcaggccatc
gctgagctgggctgggccaagcccacactgatccaggagaaggccattccgctggccctg
gagggcaaggacctgctggcccgggctaggactggctctgggaagacggccgcctatgcc
attcccctcctccagcacttgctccaagtgaagatgtcccccttggtgacggagcaggca
gtgcgtgggctggtcctggtgcccaccaaggagctgggccagcaggtgctgcagatgatc
cggcagctgacggcgtactgctcccgcgatgtccgtgtcgccgatgtctccgggcaggtg
gacatgtctgcacagaggcccatcctgatggagaagccggatgtggtggtggggacgccc
tcacgggtcctggctcacctgcagggccacagcctgagcttgcgccactccctggaggtg
ctggtcctggatgaggccgacctactcttctcctttggctttgaggaggatctgaagaac
ctgctatgccacttccccaagatctaccaaagcttcctgatgtcggccaccttcagcgag
gaggtgcaggcgctgaaggagctcgtgctgcacaacccggtgaccctgaagctgcaggag
tcccagctgccggaggcggcccagctgtgccagtaccagatccgctgcgcaggtgaggag
gacaagttcctgctgctctacgcgctgctcaagctggggctggtgcggggcaaggccatc
ctcttcgtcagcaccgtggagcgcggctaccgcctcaagctcttcctggagcagttcagc
atcccagcctgcgtactcaacgccgagctgcccgtgcagtcccggtgccacatcatcagc
cagttcaaccggggcttctacgactacatcgtcgccaccgacgagcaggtgctggcggag
cccacggtgcgggccaagaggaggaagggcgcaaagggcgccaaggcagagaagggcaaa
gacccagagtacggcgtggcacggggcatcgacttccagaatgtcgccaccatcatcaac
ttcgacccgccaccctcagtcgagtcctacatccaccgggccggcaggacggcccgtgct
gacaaccccggcacagccctgactttcgtgacacacccagagtgccccctgctggccgag
attgaggaggctctcgcaggagagagcaccgagcctgtgctgcgcccctaccagttccgg
atggaggaagtcgaggggctccgctacagatgccgggatgccatgcgctccgtcaccaag
caggccatcaaggaggcgcggctgcgggagatcaaggaggagctactcaactcggagaag
ctgaagacgtacttcgaggacaatccccacgacctgcggctgctgcgccacgaccggccc
ctgcacccggccatcatcaaaccgcacctgcgcaacgtgcctgagtacctggtgcccccc
actctgcgcgccattgcccagcccctgctcaacaagcgcaagcgacggaaacacttggcc
cccagcagcagccgccccagggggggcttccaggcccggggggggcgcaaccctctgcgg
agcttccagtacatggggaggagaccccggcgcccagctaacaaggggaagacgtcctga
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