Chrysemys picta (western painted turtle): 101953606
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Entry
101953606 CDS
T04662
Name
(RefSeq) TATA box-binding protein-associated factor, RNA polymerase I, subunit C-like
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
cpic
Chrysemys picta (western painted turtle)
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpic03021
]
101953606
Transcription machinery [BR:
cpic03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
101953606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
101953606
NCBI-ProteinID:
XP_005314860
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MLYYTHNITPGSSLPLPPHASPGSDPCVLCIPPPPPSASPAVICVPRLQRLRQDPETAFF
REASPWRWSEFTAHPRVLSCADRTGLQCLDVRAPASRQFDLFKVGGEAECQRGERVMLPM
YLGRAHPCQHLVATQFSVYVLDERFPLVPVLRWEHMLEAPPVFAHLTPGRSQETSHKVLL
GAHRTQELLLLQYSGGSHSACQLAGPPRRLHPISQGLQYLPPQVTPWQDLLHQRLTAPAA
GVTAAPAGQGPLEPLLVFQLSEAGDLFYQTLLHEPPAESESSAAPASPPSLPAPAAAGQP
SPAWGASLGSGSEESVRLPGTVSEGTANAGQAAAPEEARPSVGPAAPSPAAAARYHCWLK
ALIRDWSRLPEQSQPQALRTISHQRLFTRGELRQPAGDGLYRQARQLLRRAMRERDCLAP
WALGPPPTPPAMPHPVEPGAWPDDLSKRLTASWAGGWGEWWEEKLGVTRAHKLHALRDRR
RRLKQARSRRSLSGSFTSSVTYQSDLSDFSACSQPPGQPREEQQPPAPVCRQDLSSPRAG
RGDLPPAPGQFCPASPLASSSQRSAQEAWGSQDTQDSSQLLSSQTLSSRGIPKERRKTLR
DYLAIFTQPCPEPPAELPASQASSLGSQHWGPSSQSQRSTASQPRRKRPRMGF
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgttatattacactcataacatcacaccagggtcctcccttccccttcccccccacgcc
agcccaggcagtgacccctgcgtcctgtgcatcccaccccctccccccagtgccagccca
gcagtaatttgtgtccccaggctgcagcgactgcgccaggaccccgagacggcgttcttc
cgagaggcgtccccatggcgctggagcgagttcaccgcccacccgcgggtgctgagctgc
gccgaccgcactggcctgcagtgcctcgacgtgcgggctccggccagtcgccagtttgat
ctgttcaaggtgggaggagaagccgagtgccagagaggagagcgagtgatgctacccatg
tacctgggcagggcccacccctgccagcacctcgtcgccacgcagttctcagtgtacgtg
ctggacgagcggttccccctggtgccggtgctgcgctgggagcacatgttggaggctccg
cccgtctttgcccatctcaccccgggccggtcccaggagacgagccacaaggtgctgctg
ggcgcccaccgcacgcaggagctgctgctgctgcagtactcgggtggcagccattcagcc
tgccagctcgcagggcccccccggcggctccatcccatctcccagggcctgcagtacctc
cccccgcaggtgaccccctggcaggacctgctgcaccagagactgaccgcgcccgcggct
ggcgtgacggccgcccccgccgggcaggggccactggagcccttgctggttttccagctc
tccgaggccggggacctgttctaccaaaccctgttgcacgagccgccggcggagagcgag
tcgtcagccgcccccgcctcgcccccgtccctgccagctcctgctgcggccggccagccc
tcgcccgcgtggggcgcctccctgggctcgggcagcgaggagagcgtccgcctgccaggg
actgtctctgagggcaccgccaatgccgggcaggcagcagccccagaggaagccagaccc
agcgtgggccccgccgcccccagcccggcagccgctgcccgctaccactgctggctgaaa
gctctcatcagggattggagccggctgccggagcagagccagccccaggccctccgcacc
atcagccatcagcgcctcttcacccgcggagagctgaggcagccggccggggacggcctc
taccgccaggcccgccagctgctgcgccgtgccatgcgggagcgggactgcctggcgccc
tgggccctggggccgccccccacccctccggccatgccccaccccgtggagcccggggcc
tggcccgacgacctgagcaagcggctgacggcgtcgtgggcgggcggctggggcgagtgg
tgggaggagaagctgggcgtgaccagggcccacaagctgcacgcgctgagggaccggaga
cggcgcctgaagcaagcgcggagccgccgcagcctgtcgggcagcttcacctcctccgtc
acctaccagtccgacctcagtgacttctccgcctgcagccagccccccggccagccccgc
gaggagcagcaacccccggcccctgtgtgccgccaggacctttcctcaccgagggcggga
cggggagacctgcccccagcccctgggcagttctgcccggcctccccgctggccagcagc
tcccagcgcagtgcccaggaggcctggggcagccaggacacacaggactcctcccagctg
ctctcgtcccagaccctgagctcgcggggcatccccaaggagcgcaggaaaaccctgcgg
gactacctggccatcttcacccagccctgccccgagccgccggccgagctgcctgcgagc
caggcctccagcctgggcagccagcactggggcccctcctcccagagccagcgctccaca
gcgtcacagccccgtcgcaaacggccccgcatgggcttctga
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