Chrysemys picta (western painted turtle): 101953913
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Entry
101953913 CDS
T04662
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101953913 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpic03041
]
101953913 (PRPF4)
Spliceosome [BR:
cpic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101953913 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD_LRWD1
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
101953913
NCBI-ProteinID:
XP_005295648
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MASSRASAMRVAPGRAPLPQPGPAPSPRATKNKLSEDSDAPPPKRSHIFYGSLEEKEKER
LAKGESGLLGRERVKAAIEAGNINITSGEVFDLEDHISERQAEVLAEFERRKRARQINVS
TDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEY
QQTWYHEGPNSLKIARLWIANYSLPRATKRLEEARLYKEIPEATRTSQKQELHKSLRSLN
NFCSQIGDDRPISYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHNTNVGAIVFH
PQATVSLDKKDINLASCAADGSVKLWNLESDEPVADIEGHTMRVARVMWHPSGRFLGTTC
YDHSWRLWDLQAQEEILHQEGHSKGVYDIAFHIDGSLAGTGGMDAFGRVWDLRTGRCIMF
LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRKCVYTIPAHQNLVTGVKFEPTHG
NFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGELIATCSYDRTFKLWMAE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcgcgggcctccgcgatgcgtgtcgccccggggcgggcaccgcttcctcag
ccgggcccggctccatccccgcgggcaacaaaaaacaagctctcagaggacagtgatgct
cccccacccaagagatcccatatcttctacggcagtttggaggagaaggaaaaggaacgt
cttgccaaaggagaatcagggctgctgggaagagagagagtgaaagctgcaattgaagca
ggcaatattaacataaccagcggtgaggtctttgatcttgaagaccacataagtgagcgt
caggcagaagtgttggctgagtttgagcgcaggaagcgtgccaggcagatcaacgtttcc
acagatgactctgaagtcaaggcgtgcctacgagcacttggggagcccatcacgctcttt
ggagaggggcctgcagaacggagagaaagattgagaaatatcctctcggtggttggcaca
gatgccttaaaaaagaccaagaaagatgatgaaaaatctaagaaatccaaagaagagtat
cagcaaacttggtaccatgaagggcccaacagcctgaaaatagctaggctgtggatcgcc
aactactcgctccccagggcaacaaagcggctggaagaagcccgtctgtacaaagagatt
ccagaggcgaccaggacatcccagaagcaagaactgcacaaatccttgaggtccttgaat
aatttctgcagtcagattggagatgaccgcccgatatcttactgccatttcagtcccaat
tccaaactcctcgctacagcctgctggagtggcctgtgcaagctctggtctgtgcctgac
tgcaatcttgttcatactttacgagggcacaacaccaacgtaggagcaatagtgttccat
ccccaggctactgtctccctggacaagaaggacatcaacctggcctcttgtgcagctgat
ggctctgtcaaactctggaaccttgaaagtgatgaaccggtggcagatatcgagggccat
acaatgagagtggcacgagtgatgtggcatccttctgggaggttcctgggcaccacttgc
tatgatcactcctggcgcctctgggacctgcaagctcaagaggagattctccatcaggag
gggcacagcaagggggtctatgacatcgccttccacattgatggctctcttgctgggact
ggtggcatggatgcctttggtcgggtgtgggatctacgtactgggcgctgtatcatgttc
ctggagggccacctgaaggaaatctatgggattaacttctccccaaatggatatcacata
gcaactgggagcggggacaacacatgcaaagtgtgggacctccgccagaggaagtgtgtc
tacaccatacctgcccaccagaacctggtgacgggagtgaagtttgaacctacgcatggt
aacttcctgctcaccggtgcttacgataacacagccaagatctggactcacccaggctgg
tcccctctgaaaacgctggctggccacgagggaaaagtaatgggattggatatctcctca
gatggggagctaatagcaacatgctcatatgacaggaccttcaagttgtggatggcagag
tag
DBGET
integrated database retrieval system
