Chrysemys picta (western painted turtle): 101954201
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Entry
101954201 CDS
T04662
Symbol
TLR4
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04145
Phagosome
cpic04217
Necroptosis
cpic04620
Toll-like receptor signaling pathway
cpic04621
NOD-like receptor signaling pathway
cpic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101954201 (TLR4)
09143 Cell growth and death
04217 Necroptosis
101954201 (TLR4)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
101954201 (TLR4)
04621 NOD-like receptor signaling pathway
101954201 (TLR4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101954201 (TLR4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpic04131
]
101954201 (TLR4)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpic04054
]
101954201 (TLR4)
04090 CD molecules [BR:
cpic04090
]
101954201 (TLR4)
00536 Glycosaminoglycan binding proteins [BR:
cpic00536
]
101954201 (TLR4)
Membrane trafficking [BR:
cpic04131
]
Endocytosis
Phagocytosis
Toll-like receptors
101954201 (TLR4)
Pattern recognition receptors [BR:
cpic04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
101954201 (TLR4)
CD molecules [BR:
cpic04090
]
Proteins
101954201 (TLR4)
Glycosaminoglycan binding proteins [BR:
cpic00536
]
Hyaluronan
Cell surface receptors
101954201 (TLR4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_14
TIR_2
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
101954201
NCBI-ProteinID:
XP_005301444
LinkDB
All DBs
Position
20:412147..419660
Genome browser
AA seq
840 aa
AA seq
DB search
MFGREALSFSTCFVQSLATLFLSQLMASSLNPCVEETTNITYRCMELNLSGVPDEIPPST
QNLDLSFNPLESLTSNYFSAVPALRFLDLTRCHIQTIEDYAFEDLPNLLTLILTANPLWH
LGPKAFYSLTSLQKLVAVEDNISSLADLPIGHLHTLQELNVATNNVDSLKLPKYFSNLTF
LRFLSLQSNKISSISIGDLDVLQGEKGLNLTLVLSSNDIKYIQPGSFEGIHLHELSLRAC
FENTNVMKACIQGLAGLQVHRLVLGEFRNIQRVEDFSNGLLDGLCLVQLQEFVFICFKRF
NNGTDTLFDCLGNTSTVRLVDLYLDQVSAVPTASRIHQLECKTCKFSEVPALKLSSFKEL
RLLRITKSKYLTGFQQKFVDLDNLEVLDLSENRLSFIKCCSFHLGGTPKLKHLNLSFNSI
ISVSGGLPLHELVSLDFQHSKLDNLGTVPVFVSLGKLIYLDISYTNTHVESQYVFCGLAS
LQVLKMAGNSFKDNNLGDSFKNLTQLLTLDVSSCKVIQVSLSTFSSLGKLQTLNISHNKL
LTFDHPAYKPLQALTVLDFSSNQLTVLTENAQESLPSSLVHLDLSYNLFICSCNHLSFLK
WAQEHGELLRSTELMVCISPEHLKNASVLNFDLSSCQLSAVLVAVYVGTALAGAVFLFLI
YKYYFNLYYGLVLLSGCRRYADRGDTYDAFVIHSSKDIEWVRKELVETLERGVPPFHLCL
HYRDFTPGVPIASNIIHEGFLSSRKVIAVISNHFMESKWCSFEFEIAQSWQFMEGRAGII
LIVLEEVDKVLLRRKLGLSRYLKRNTYLEWKDREISRHLFWRQLRTALLDGKTEPGRGGN
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggagagaagctctctctttttcaacctgttttgtgcagtctttggccacgctt
ttcctgtcgcagttaatggccagcagcctcaacccctgtgtggaggagaccaccaacata
acttacagatgcatggagttgaacctctctggagttccagatgaaatcccaccttccacc
cagaacttggatctgagtttcaacccactggagtcactgacctcaaattatttctcagca
gttcctgcactgaggtttctggacctcactagatgtcacatccagacaattgaagactat
gcttttgaggatcttcctaacttgctcaccttgattctgactgcaaatcccctctggcac
ctgggaccaaaagccttctatagtttgacatccctgcagaagctggtagctgtggaagac
aacatatcctcgctagctgacctgcccattggacatttacatactctgcaggagctgaat
gtggccacgaacaatgtagactctttgaagctccccaaatatttctccaacctgacgttt
ctccgattcctgagccttcaatcgaacaagatctcatctatctccataggagacctggat
gttttgcaaggagagaaggggctcaacctaacattagtgctgtctagcaatgatataaaa
tatattcagccaggctcctttgaggggattcatcttcatgagctgtctctgagggcttgt
tttgagaacaccaatgttatgaaggcttgcatccaaggccttgctggcttacaggtccac
agactagtgcttggagagttcaggaacattcagagagtggaggacttcagtaatgggctc
ctggatggactgtgtctggtgcagctgcaggagtttgtgttcatttgcttcaagaggttt
aataatggcacagacactctcttcgactgcctgggcaacacctccactgttcggctggtg
gatctctacctcgaccaggtgtcagcagtcccgactgcctccagaatacaccagctggaa
tgcaagacctgcaagttcagtgaggtgcctgccctgaagctgtcctccttcaaagagctg
agactgcttcggatcaccaagagcaaatacctcactggcttccagcagaaatttgtggat
ctggataacctggaggtcctggatctgagtgagaaccggctcagcttcatcaaatgctgc
tcctttcacctgggtgggactccaaagttgaagcacttgaacttgagcttcaactccata
atcagcgtatccggaggcttgccgctccatgagctggtatctctggactttcagcactca
aagctggataatcttggcactgtccctgtcttcgtctcccttgggaaactcatctacctt
gatatttcctacaccaacactcacgtcgagtcccagtatgtgttctgtggcttagcgtcc
ctgcaagtgctcaagatggccggcaactcctttaaggacaacaacctgggcgacagcttc
aagaacctgacccagctgctcaccctggatgtttccagctgtaaagtgatacaggtgtct
ctgagcacattttcttcccttggtaaattgcagacgctaaacatcagtcacaacaagttg
ctgacttttgaccacccagcctacaagcctctccaggccctcactgtcctggactttagc
agcaaccagctgactgtcttgacagaaaacgctcaggagagcctgccgagcagcttggtc
cacctggacctctcttacaacctgttcatctgctcctgcaaccacctgagtttcctgaag
tgggcccaggagcacggggagcttctccggagcaccgagctgatggtctgcatcagccct
gagcatctgaagaatgcgagtgtgctgaactttgacctctcctcctgccaactcagtgcc
gttctggtggccgtctatgtgggcacggccctcgccggagctgtgttcttgttcctcatt
tacaaatactacttcaacctgtactacgggctggtgctgctcagcgggtgcaggcggtac
gcggacaggggcgacacctacgacgcctttgtcatccactccagcaaggacattgagtgg
gtgagaaaggagctggttgagaccttggagcggggagtgccccccttccacctctgcctc
cactaccgggacttcacgccaggggtgcccatcgcctccaacatcatccacgaaggcttc
ctgagcagcaggaaagtcatcgccgtcatctccaaccacttcatggagagcaagtggtgc
agctttgagtttgagatcgcccagtcctggcagttcatggagggcagagctggcatcatc
ctgattgtcctggaggaagtggataaggtgctgctgaggcgtaagctggggctgtcccgc
tacctgaagaggaacacctacctcgagtggaaggacagggaaataagcaggcacctcttc
tggaggcagctgagaacggccttgctagatggcaaaacagaaccaggaagggggggaaac
taa
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