Chrysemys picta (western painted turtle): 135981639
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Entry
135981639 CDS
T04662
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic03013
Nucleocytoplasmic transport
cpic03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135981639
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135981639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpic03019
]
135981639
Messenger RNA biogenesis [BR:
cpic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135981639
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
135981639
NCBI-ProteinID:
XP_065441071
LinkDB
All DBs
Position
2:179898714..179963751
Genome browser
AA seq
1465 aa
AA seq
DB search
MASGGGGGDGSGGGKIRTRRYHLGASKPYPRNKQQGIISRVTESVKNIVPGWLQRYFNKS
EDECVDASEPTSQQETPVNYHHGYADDDTPVFDGRVTPESTRINLEEPSTSRSALNFSDV
LTRPSLHRSHLNCTMLDSPSAHCQPSTSSAFAIGSSGLSLVKEIKDSTSQHDDDNISTTS
GFSSRASDKDIAVSKNTSVPPLWSTEAERSHSLTQHSATSSKKPAFNLSAFGALSPSLGN
ASVLKTSQLGDSPFYPGKTTYGGAAAAARQSKIRLTPYQTPVRRQMKAKQANVQSYGVTS
STARRILQSLEKMSSPLADAKRIPSSVASPLSSPVDRSMVDITRFHSKRKQVESLHPPVQ
KLVTPKTISQSMSRLQYFKPSLTPAAESGKIRQRVDVKHKGVREKNLTAEQQVEPPESNF
TYPKFSTPASNGLYSGVGGGGGGKMRRERGVHYVSQPGQEKQEVEAPVLPKIPLPINTTS
LPNFSFGSLASTTVSSSPITNTQPVINKMQPASNASSPVFRFSSPIVKSTEAEVLPPLSI
GFTFSVPVVKSTQASGSSDTPVPLLISPGTTAVNSTSNKKKEKEEYDGAFKPAKVLKEGS
VLDLLKSPDFTSLKTHNPTATQPVSTSTEVYTRPAISNFSAGSLGFRETSKQASSYWRCD
TCLLQNKATDNKCITCQAAKVPTADPAKQTGTLTLSSTVKSTAPATGTLGFGDKFKTAAG
TWDCDTCLVQNKPEATKCVACETPKPGTGVKPALTLPVVTENTITVTSSPSCTETTVTLG
FGDKFKKPKGSWDCTVCLVSNKAEDSKCVACQCERPGGSVPVTSSSTSSFSAPSGGFLGL
DKFKKPEGSWDCETCLVQNKAEATKCIACENAKPGTKPELKGFGTAAVSSDAAAPSFKFG
IQSSSSESSQTLGSTESFKFGEQGGLKFGITSESGSVTNNMTGGFNFSKTSGDFKFGVSS
SDSKSEESKKDSKNNNFNFGLPSGTSNPSTSAFQFGTSNLGQQEKKEEPVLGGFSFGTSS
TAPIATLENKTGVSGFSFGTVAEKEVAATPFLFKQSEEKKDETPSAKGGFTFGSMEPASA
SQFVLGRTEEKQDSVTSATSLVFRKTVDNEEPKAQSVFSFGKSEQTKEESTAKPPFSFNL
TKPGEKETEQTKPAFTFGAQTNTADPGAAKPAFGFLSSGSSSTAIPSTSANSSSVFGSSS
SASNPPPVAAAFLFGQASNTVSSSAFGNASESNAPQSFGFSQENKPATTSSSTGAAVGSF
LFGSGTGSNNTATPGFNFGATTTSSSTGSSSSFVFGSGSSAPAVGPSQPPAFGASQTPTF
GQSQGASQPNAPTFGSLSSTSLFSAGSQPAPPAFGSVSSSSQPPVFGQQASQQPGFGSGT
TPNSGAVFQFGRSDNFSFTSNSPGVFTFGGNPGAPAPPTQPSGSSGFPFNPTPAFAMGSN
GKNIFSASGSSVSGRKIKTAVRRRK
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcgggggaggcggcgacggcagcggaggggggaagatccggacccggcgg
taccacctgggcgcctcgaagccctacccgagaaacaagcagcagggaatcattagcaga
gttacagaatcagtgaagaatatcgtaccagggtggttacaaaggtacttcaataaaagt
gaagatgaatgtgtagatgcaagtgaacctacaagccagcaggaaactccagtaaactac
catcatggttatgcggatgatgacaccccagtgtttgatgggagggtcactcctgagtca
acaagaattaatttagaagaaccatccacaagtagatctgcattaaacttctcagatgta
ttaacaagaccctctcttcatcggagtcatttgaattgcaccatgttggattccccatca
gcacattgtcagccttccacatcctctgcatttgcaattggcagttctggactctctctt
gtaaaagaaatcaaagattctacctctcagcatgatgatgataacatctcaactactagt
ggcttctcctctagagcatctgataaagatatagcagtttcaaaaaatacatcagtacca
ccactctggtccacagaggctgaacgatctcattctctcacacaacattctgctaccagc
tctaaaaaacctgcattcaacttatctgcttttggagccctatccccttcacttggtaat
gcttctgtccttaagacaagccagcttggggattctccattttaccctggaaaaaccact
tatggtggtgcagctgcagcagcaaggcaatctaaaatacgacttactccttatcagaca
ccagtcagaagacaaatgaaagctaagcaagcaaatgtgcaatcctatggagtgacaagt
tccacagcgcggcgcatcttgcaatctctggagaagatgtcaagtcctttagcagatgct
aaaaggattccatcttctgttgcttctccactgtcttctcctgtggacaggagcatggtg
gatattactcgcttccattcaaagagaaaacaggtggaatccctgcaccctccagtccag
aaattagtgacaccgaagacaatttctcagtcaatgagtcggttacagtattttaaacca
tctctgactccagctgctgagtcaggcaagattagacagagagtagacgtaaagcacaaa
ggagtgagggagaagaatttgactgcagaacagcaagtagagccacctgaaagcaatttc
acataccccaaattcagtacacctgcatctaatggattatattctggagtgggaggtggt
ggcggtggcaagatgagaagggaaagaggagtacactatgtatctcaaccaggacaagaa
aaacaggaggtggaggcaccagtactacccaaaatacccttaccaattaatactacatca
ctgcctaacttcagctttggctcccttgccagtactactgtgtcgtcatcaccaatcact
aatacacaaccagtgattaacaagatgcaaccagcaagtaatgctagcagtcctgtgttc
agattttcatctccaattgtaaaatctactgaggcagaagtgctacctccactgtctatt
gggtttacgtttagtgttcctgttgtgaaatcaacacaagcttctggatccagtgatact
ccagtgccacttctgattagcccaggtaccactgctgtaaatagcaccagcaataagaag
aaagaaaaggaagagtacgatggcgccttcaagcctgcaaaagtcttgaaagaagggagt
gtactggatcttctaaaaagtcctgactttacttctctgaagacacacaatcctacagcc
acacaacctgtttcaacaagcacagaagtttatacacggcctgcaataagtaatttttct
gcaggttcattgggatttagagagacctctaaacaagcatcatcatattggcgctgtgac
acatgtctcttacaaaacaaggcaacagacaacaaatgcatcacctgtcaagctgctaaa
gtgccgacagcagatcctgctaaacagactggaacgttgactctaagcagcactgttaaa
tcaactgctcctgcaacaggaacactgggctttggagacaaatttaaaacagcagcagga
acatgggattgtgatacatgtctagtccagaataaacctgaagctacaaaatgtgtggcc
tgtgagacaccaaagcctggaacaggagtaaagcctgctctaacattgccagtggtcaca
gaaaatacaataacagtgacttcctctcctagctgcactgaaactacagtcactttgggg
tttggagacaaattcaaaaaaccaaagggttcttgggactgtacagtgtgccttgtgtca
aataaggcagaagacagtaaatgtgtagcttgtcaatgtgagagaccagggggttcagtg
cctgtgactagtagcagcacatcctctttctccgctccttctggaggatttctgggatta
gacaaattcaagaaacctgagggaagctgggactgtgaaacatgcttggtacaaaacaaa
gcagaggccacaaagtgcatagcttgtgagaatgcaaaaccaggcaccaagcccgagctc
aaaggttttggtactgctgctgtgtcctcagatgctgctgcaccgtcatttaaatttggt
attcagtcatcatcctcggagtcatctcagacattaggaagcacagaaagttttaaattt
ggagaacaagggggtttgaagtttggtattacatcagagtcgggatctgtaacaaacaac
atgactgggggcttcaatttctctaaaacttcaggggacttcaaatttggagtctcttcc
tcagactctaaatcagaggagagtaaaaaagacagtaagaataacaattttaactttgga
cttccctctggtacaagcaatccatctacttcagcatttcagtttgggacatccaatctt
ggacagcaggaaaagaaagaggaacctgttttagggggtttcagttttggcacaagttct
actgcccccatagctacattagagaataaaacaggagtgagtggattcagtttcggaacg
gtggcagaaaaggaagttgcagcaactccttttttatttaaacagtcagaggagaaaaaa
gatgaaactccttcagccaagggaggcttcacttttggcagcatggagcctgcatctgcc
tcacagtttgtcttgggaaggacagaggagaaacaggactctgttacctctgctacttca
ttagtgttcaggaagacggttgacaatgaggagccaaaggcgcaatccgtcttttcattt
gggaagtctgagcagaccaaagaagagagcacagcaaaacccccattcagtttcaactta
acaaaaccaggagagaaggaaactgagcaaacaaagccagcttttacatttggggcacaa
accaatactgcagatccaggggcagcaaagccagcctttggtttcttgagctctggttcc
tccagcacagccataccaagcacttctgctaacagtagtagtgtgtttggcagctcctcc
tctgcctcaaatcctccaccagttgccgctgcctttttgtttggacaggccagcaacact
gtgagcagttctgcatttggcaatgcctccgaatccaatgcccctcagtcatttgggttc
tctcaagaaaacaaaccagcaaccacatcctccagcacaggtgcagctgttggttcattt
ctctttggttcaggaacaggcagtaacaatactgcaacccctggtttcaactttggggcc
acaaccacatcaagttctacaggttcttcctcttcatttgtgtttggctctgggtcttca
gcacctgctgtcggtcccagccagccaccagcatttggtgccagccagacaccaacattt
ggtcaaagtcaaggtgccagccagccaaatgctccaacttttggatcattatcatcaact
tcattattttcagctggctctcagcctgcacctccagccttcgggtctgtgtcaagcagt
agtcagcctcctgtgtttggacagcaagcaagccaacagcctggttttggctctggtaca
acacctaattccggtgctgtattccagttcggacgtagtgataatttcagcttcacaagt
aatagcccaggagtgtttacttttggtggaaatcctggtgcaccagcgccaccaacccag
ccttctggctcttcaggatttccatttaacccgactccagcatttgcaatggggtctaac
gggaaaaatattttctctgcttctggatcttcagtttctgggcggaagataaagactgca
gttagacgtagaaaataa
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integrated database retrieval system
