Culex pipiens pallens (northern house mosquito): 120412921
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Entry
120412921 CDS
T07310
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpii03009
]
120412921
Enzymes [BR:
cpii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120412921
Ribosome biogenesis [BR:
cpii03009
]
Eukaryotic type
Pre-60S particles
Helicases
120412921
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Helicase_C_2
CCDC71L
Motif
Other DBs
NCBI-GeneID:
120412921
NCBI-ProteinID:
XP_039429486
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All DBs
Position
3:124668234..124694650
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AA seq
610 aa
AA seq
DB search
MSRPSSKWTDLGKPLSPPVLEVIEQLGFEKMTPVQAATIPLLLSYKDVAAEAVTGSGKTL
AFVVPLVELLLKRQRDSAWKKAEVGAIIVSPTRELATQISDVLGQFLGHEELGKFSQKLL
IGGNSVEEDVSGIVREGATVLVATPGRLKDLFERKGDLNMASRVKSLELLVLDEADRLLD
LGFETTINTILGYLPRQRRTGLFSATQTKEVRDLMRAGLRNPVLVSVKEKAAVSTPKLLQ
NYYVIVEPQFKLAVLLDFIRKQDLKKAMIFFPTCACVEYWGVALAELMRPMKVLALHGKM
KAQRNRILTDFRESETALLLCTDVLARGVDIPEVDWVLQWDPPSNAAAFVHRVGRTARQG
QEGNALIMLLPTEDAYVEFLTRNQKVALKKVSFEVSEKKLTKTLNVLHRLQKSDRGVFDK
ANRAFVSHVQAYSKHECNLILRLKDLDLGKVATSYGLLQLPRMPEMKDHFKQSFKGPADP
VDCNKLAYKDKQKQASYDNKVKIYEETGEWKSKNKLLKKKTVPWEQAKQEREDRKEIRKK
RREAKQKRKAAVEAGELEVVKKKKAKFSREELEELANDIRALKRCKKKKITREECDEELG
IGASELEDSD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccaagctccaaatggaccgacctgggcaaaccgctcagcccgcctgtgctg
gaggtgatcgagcagctcggcttcgagaaaatgacccccgttcaggccgcgacgattccg
ctgctgctgtcgtacaaagatgtggccgccgaggcggtcaccgggtcgggcaagacgctg
gcctttgtggttccgctggtggaactgttgctgaaacggcaaagggactcggcgtggaag
aaggctgaggtgggggcgatcattgtttctccgacgcgggagctggccacgcagattagt
gacgtgctggggcagttcttggggcacgaggagttggggaagttttcgcagaagttgttg
attggtgggaattcggtcgaggaggatgtgagtggaattgtgagggagggggcgacggtg
ttggtggccactccggggaggttgaaggatttgtttgagcggaagggggatttgaacatg
gcatctagggtgaagagtttggagctgttggtgttggatgaggcggatcggctgctggat
ttggggtttgagacgacgattaatacgattctggggtatttgccgaggcagcgtagaacg
gggctgttttcggccacgcagacgaaggaggttcgcgatttgatgagggcgggattgagg
aatccggtgctggtcagcgtgaaggagaaggccgccgtcagtacgccaaagttgctgcag
aattactacgttattgttgagccgcagtttaagttggcggtgttgttggactttatccgg
aagcaggacttgaaaaaggccatgatcttcttcccaacttgtgcctgcgtagaatattgg
ggtgtggccctagccgagctcatgcgaccgatgaaggtcctcgcccttcacggcaagatg
aaagcccaacggaatcgaatcctcacagatttccgcgaatccgagaccgcccttctactc
tgcacagacgtcctcgctcgcggcgtagacatccccgaggtagactgggttctgcagtgg
gatcctccctcgaacgcggccgcctttgtacaccgcgtaggccgaaccgcccgccaaggc
caagaaggcaacgccctcattatgctactgccaacagaagacgcctacgtggagttcctc
acccgcaaccagaaggtcgccctcaaaaaagtctccttcgaagtgtccgaaaagaagctc
accaaaaccctgaacgtcctgcaccgcctccagaaatccgaccgcggcgtcttcgacaag
gccaaccgtgccttcgtgtcccacgtccaggcgtacagcaaacacgaatgcaacctcatc
ctccgtctcaaggacctcgacctgggcaaggtagcaacttcctacggcctgctccaactc
ccccgaatgcccgaaatgaaggaccacttcaagcaatccttcaaaggacccgccgaccca
gtcgattgcaacaagctcgcgtacaaggacaaacagaagcaagcctcgtacgacaacaag
gtgaaaatctacgaggaaaccggcgagtggaagagcaaaaacaaactgctgaagaagaaa
acggttccgtgggagcaggcaaagcaggagcgggaagaccggaaagagatccggaagaag
cggcgggaggcgaagcagaaacgcaaagctgccgttgaggccggagagttggaggtggta
aagaagaagaaggccaagttctcgcgggaagagctggaggagctggccaatgatatccgt
gcgttgaagcggtgcaagaagaagaagattacgcgagaggagtgcgatgaagagctggga
attggcgcgagtgagctggaggatagcgattaa
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