KEGG   Culex pipiens pallens (northern house mosquito): 120413349
Entry
120413349         CDS       T07310                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120413349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpii03041]
    120413349
   03036 Chromosome and associated proteins [BR:cpii03036]
    120413349
Spliceosome [BR:cpii03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120413349
 Complex B
    120413349
 Complex C
   U2 SnRNP specific factors
    120413349
Chromosome and associated proteins [BR:cpii03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    120413349
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG mTOR_dom Condensin2nSMC Aconitase_2_N DUF2298 UNC45-central
Other DBs
NCBI-GeneID: 120413349
NCBI-ProteinID: XP_039430061
LinkDB
Position
1:complement(26258178..26267705)
AA seq 1331 aa
MENIPRTHEDIEAQIRDIQSKKKEISAEAAKDKGVGLLESGYYDADLYDGAAGKGKYEGY
VTSIAPNDDVDDDEDDGMPMGRGGDGGAGGGGRNRAPGYTAPAALLNDVAQPDADFDPFA
DRRRPTVGEKEDEYRQKRRRLVISPERADPFADGGKTPDVGSRSYTEIMREQMLKGEEVE
LRKKIQEKAKDGSLVINRESSNGDGSSSKSAAESKKRGRWDQTVEESFVPPKKLSTVPAT
PTWGDAEKTPADHRWDETPGHKGSETPGATPSARIWDATPAHSGATPGRETPAEKSTRRN
RWDETPKTERETPGHSWAETPRADRGPSDSVMDSTTPASKRRSRWDETPSNATPSAMTPS
IAMTPTPHATPGHTTPLLTPGGSTPIGNKAMAMATPTPGHLASMTPEQLQAYRWEKEIDE
RNRPFSDEELDAMFPPGYKVLPPPAGYIPIRTPARKLTATPTPMAGTPAGFFIQQEDRSA
KFIDNQPKGNLPFMKPEDAQYFDKLLLDVDEEALSPEEQKERKIMKLLLKIKNGTPPMRK
AALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHK
ILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFA
VVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHG
LVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYL
IPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEAQYIKEEILPH
FFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETIE
KIMGNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLSKRVKPYLPQIC
GTILWRLNNKSAKVRQQAADLISRIAIVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSI
LGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAR
EWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTT
VAIAIVAETCRPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVCPLL
EDALMDRDLVHRQTACAAIKHMALGVYGFGCEDALIHLLNYVWPNIFETSPHLVQAFMDA
VEGLRVALGPIKILQYTLQGLFHPARKVRDVYWKIYNSLYIGAQDALIVGYPRISNDPKN
QYIRYELDYNI
NT seq 3996 nt   +upstreamnt  +downstreamnt
atggagaacataccacgaacgcatgaagacatcgaggcccaaatccgggacatccagtcc
aagaagaaagaaataagcgccgaggccgctaaggacaagggcgtcggtttgctagagagc
ggctactacgatgccgatttgtacgacggggctgccggcaagggcaagtacgagggctac
gtcacgtcgattgcgccgaacgacgatgtggacgacgacgaggacgacggaatgccgatg
ggacggggaggagacgggggagctggtggtggcgggaggaatcgagcccctgggtatact
gcgccggcggcgctgttgaacgatgtcgcgcagcccgatgcagattttgatccgttcgcg
gaccggcgccgacctacggtcggtgagaaggaggacgagtatcgccagaagcgacgccga
ctggtcatctcgccggagcgtgccgatccgtttgccgacggcggcaagactcccgatgtc
ggttcccgctcgtacacggagatcatgcgcgagcagatgctcaagggcgaggaggttgag
ctccgcaaaaagatccaggaaaaggcaaaggacggttccctcgtgatcaaccgcgagtcg
agcaacggagacggcagcagcagcaagtcggctgcggaatcgaagaagcgtggccgctgg
gaccaaacggtggaggagtcgttcgtgccgccgaagaagttgtccaccgtgccggcgacg
ccgacgtggggcgatgcggagaaaaccccggccgaccatcgctgggacgaaacgcccggc
cacaagggcagcgaaacgccgggggcgaccccgagcgcacgcatctgggacgccacgccg
gcccactcgggtgccactccggggcgggaaacccccgcggagaagtcaacgcgtcgcaac
cgttgggacgagacgccgaagacggagcgtgaaactccgggtcattcgtgggctgagacg
ccccgtgccgatcgcggaccgagtgatagtgtgatggacagcacaacgcctgcttcgaag
cgacgttcccgttgggacgaaacgccctcgaacgctaccccgtcggccatgactccgtcg
atcgcgatgaccccaaccccgcacgcaacacccggacatacgacgcccctgctcacccca
ggcggttccaccccgatcggtaataaagcgatggccatggccacgcccaccccgggccat
ctcgcgtcgatgaccccggaacagctgcaagcgtaccgctgggagaaggaaatcgacgaa
cgcaaccgaccgttcagcgacgaagaactggacgccatgttcccgcccgggtacaaagtg
ctcccacccccagccggttacatcccaatccgtacgccagcacgcaagctgaccgccacg
ccaaccccgatggccggaaccccagccggattcttcatccagcaggaggaccgcagcgcc
aagttcatcgacaaccaacccaagggcaatctgcccttcatgaagccggaagatgcgcaa
tactttgacaagctgctgctggacgtggacgaagaagcgctcagtccggaggagcagaag
gagcgtaaaattatgaaacttctcctgaagatcaagaacggaacgcctccgatgcgaaag
gccgccctccgtcagatcaccgacaaggcgcgtgaattcggcgcaggaccactcttcaac
cagattctacccctgctgatgagtcccaccctggaagaccaagagcgtcatctcctcgtc
aaggtcatcgatcgcattctctacaaactggacgacctcgtgcgtccgtacgtgcacaag
atcctggtcgtcatcgaaccgctgctgatcgacgaagattactacgcccgcgttgaaggt
cgtgaaatcatctccaacttggccaaggccgccggcctcgccacgatgatctcaaccatg
cgtcccgacattgacaacattgacgagtacgtgcgaaacacgacggcccgtgccttcgcg
gtggtcgcttccgcgctcggaatcccctccctcctacccttcctgaaggccgtctgcaag
agtaagaagtcgtggcaggctcgccacaccggcatcaagatcgtccagcagattgccatc
ctgatgggttgcgccatcctgccccatctcaagtcgctggtcgagattatcgagcacggg
ttggtggacgagcagcagaaggtccgtacgattacggcgttggcgctggcagcgctggcc
gaagccgccactccgtacggtatcgagtcgttcgattccgtgctgaagcccctctggaag
ggtatccggacgcatcgcggtaaaggtcttgcggcgttcctcaaagccatcggttatctg
atcccgctcatggacgccgagtacgccaactactacaccagggaagtgatgttgatcttg
attcgtgagttccagtcgccggacgaggagatgaagaagattgtgctgaaggtcgtgaag
cagtgctgcgcgacggacggtgtggaggcgcagtacatcaaggaggaaatcctgccgcac
tttttcaaacacttttggaaccaccgaatggcgctggatcggcgaaactaccgccagctg
gtggacaccacggtggagattgccaacaaggtgggcgcgtccgagatcatcaaccgcgtc
gtggacgatctcaaggacgaaaacgagcagtaccgcaagatggtgatggagaccatcgag
aagatcatgggcaatttgggcgccgccgacatcgattccaggctggaggaacagctcatc
gacggcattctgtacgcgttccaggaacagaccaccgaagacgtggtcatgctgaacggc
ttcggcacgatcgtcaaccagctgagcaagcgcgtcaaaccgtatctcccccagatttgc
ggtaccatcctctggcgattgaacaacaagtcggccaaggtccgtcaacaagcggcggat
ctcatctcccgaatcgccatcgtcatgaagacatgccaggaggagaagctgatgggccat
ttgggcgtcgtcctctacgaatatctcggcgaggagtaccccgaagtgctcggatccatt
ctgggcgccctcaaagccatcgtcaacgtaatcggcatgaccaaaatgacacccccaatc
aaggacctcctgccccgtctcacccccatccttaagaatcgccacgaaaaggtccaggaa
aactgcatcgacctggtcggtcgcatcgccgatcgtggccccgagtacgtgtccgcccgc
gagtggatgcgcatctgcttcgagcttctcgaactgctcaaagcccacaaaaaagcgatc
cgacgagccaccgtcaacacgttcggttacatcgccaaggccatcggcccgcacgacgtg
ctggccacgctgctaaacaacctcaaagtccaagagcgtcagaaccgtgtctgcacgacc
gtcgccatcgccatcgtggccgaaacgtgtcgtcccttcaccgtgctccccgccctcatg
aacgagtaccgcgtgcccgaactcaacgtccagaacggcgtcctcaaatcgctctccttc
ctgttcgagtacatcggagaaatgggcaaggattacatctacgccgtgtgccccctcctc
gaggacgccctcatggatcgggacctggtccaccgacagacggcgtgcgccgccatcaag
cacatggccctcggagtgtacggctttggctgcgaggacgcgctcatccatctgctcaac
tacgtttggcccaacatcttcgagacgagcccccacttggtgcaagcattcatggacgcc
gtcgagggccttcgggtggcgctcggaccgatcaagatcctgcagtacacgctgcaggga
ctgttccatccggcgaggaaggtgcgcgacgtttactggaagatttacaactcgctgtac
attggcgcccaggacgcgctgatcgtgggctatccgcgcatttccaacgatcccaagaat
cagtacattcggtacgagctggactacaacatctaa

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