Culex pipiens pallens (northern house mosquito): 120413392
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Entry
120413392 CDS
T07310
Name
(RefSeq) uncharacterized protein LOC120413392
KO
K12597
protein AIR1/2
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120413392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpii03019
]
120413392
03016 Transfer RNA biogenesis [BR:
cpii03016
]
120413392
Messenger RNA biogenesis [BR:
cpii03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
120413392
Transfer RNA biogenesis [BR:
cpii03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
120413392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
120413392
NCBI-ProteinID:
XP_039430124
LinkDB
All DBs
Position
3:complement(92742557..92752153)
Genome browser
AA seq
1350 aa
AA seq
DB search
MDLNEHELAELEERLYSSIHHAADPGVGPAAAEPSSATPGLSATAADKSTSSEPTPGSGS
TVRIVTDKAIVNASKMKRYWSSMENYTGIRRPNRPRNNNAPAVEASRVEGGEGEDGVVKT
FTPYQSILGPSGMGGSGSSSPRGEFLLMEGMPSKQKKKKVGEGRKVLNPSSLRGKKMEQL
QKIKAKKAKASKSRQKAQVGQQRLVATIELESSDDQDGEDCSPDPIKQEQEGIEHQDLED
SDPDEVVLVPSAPPPLVCIDSSDEDGTKDKFTHPKSKKKKTNKKVNSPRCLSPSNSSIMS
DDFIGHNDRTRLNDSFIEGITNDLELECQDVPSGSAIFASDHPQTSRADRAPSISSEGTV
ATSSDTTDQDKRLNKSATGATKPTFCSTPKQTLHVRRASAKSREQPEEDSIYSATSAKKS
KPAEKRASSGGDSSDECDDGESRSKRSKSYHSDASSTKSSKKQRSKKRRKKDSEHYSDED
FASILTDIVQAISENEGDSSDEPPAEPEVVAEPVENITDSDILEIKDQEPNTISLPQVEP
RENFVKAPSPEALDDSNDVVAIEPPPPPMINLADEDTRDVSGERAEYERIPGLRRIDDDP
ECCWNEEMKKFYNDSWNCEDFNVSTVLFNMPRQTKHWPIVHKDKFPDPPKKEIICNNCQQ
PGHMKYKCRRPPKPPTCYMCGLTGHQETRCPNTLCLRCGEKTNNFLRGCHACSREQHMTC
HLCGIRGHAQRNCPDKWRRYHSTIEVDRPLTRDYQRNPNARSCCICARPGHQAHACHAAV
RIFGQCVPTTEIINYQPMYYPERQQQQERDEQGPRFNLFSEVGDFQLNFDDSIAKNENSF
YHRFSKSVGLLEKKKKQEERLARKMKRDAKRRKKEAGGGDEDVVEMVPGEESVGKIAEEE
VGGAAAGSKSTATAVANEDSNYSFSEFYEDKAGKQQPQSALSSEPMPDFIPLTSPDESAN
HAFAVPANVEQNTEAKIYLTKPHAKILLGPHGANFLKDASAKFTLKLSIAFQPVGNVLLA
NGLSQNQDNFHNDLVKFLNSASHQNEQIKQINNVPKGTDKTIRYIVEHLQLLTRSYENVK
SMFRRYQHCEQQGTNPKTCDKVRRNLNIILFGQFGMRQGRDHLNQLQSNLQELKDTANPI
VSLETRDQINQHIRYIFTSYDHADYEDIMQEYDALRKSQKLSKVKPEDLNLTLPAKLNLL
TIVDSKEADDPDDSSFNVSKEFSFDDSSLPSDLILNTSDQLIDDAEPPKREEEEAQVTPP
AAVEETPISGAGSSAAPSSKQSKVEFLLNDCRQMVKVLDNKPITAKFDLIYEQTREGNVS
KANYRTLMGIHGILKSKLYRKRKKNKMANS
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggacttgaacgagcacgagctggcggagctggaagaacggctttactccagcattcac
catgcggccgatcccggcgttggtccggctgcggcggaaccctcgtctgccactcccggt
ttgtccgcaacagcagcagacaagtcaacctcttcggaacctacgccgggttccggatcg
acggttcgcatcgtcaccgacaaggccatcgtgaacgcgtccaagatgaagcggtactgg
agctctatggagaactataccgggattaggcgaccgaacaggccacggaacaacaacgcg
ccggcggttgaagcgagtcgggttgagggaggagagggagaggatggcgtggtcaagaca
ttcactccgtaccagtcgattctgggaccatccgggatgggcggaagtgggtccagcagt
ccgcgaggggaattcttgctgatggaaggaatgccaagcaagcagaagaagaaaaaggtt
ggggaaggcaggaaggtgctgaatccgagcagtttgcggggcaaaaagatggaacagctg
cagaagattaaggccaagaaggccaaagctagcaagagtcgccagaaggcccaggttggc
cagcagcgtttggtggcgacaatcgagctggaatcttcggatgatcaagatggagaagat
tgctcgccggatccgatcaagcaggagcaggagggaattgagcatcaagatttggaggat
tctgacccggacgaggttgtgctggtgccaagtgccccgcctccgctggtgtgcatcgat
agcagcgacgaagacggaaccaaagacaagttcacccatccaaagtctaagaagaagaag
actaacaaaaaggtcaactcgccacgttgcttgagtccttcgaacagctccataatgtcg
gatgatttcattggccacaacgatcggaccaggctgaacgatagtttcatcgagggaatc
accaacgatttagagctggaatgccaggacgttccgtccggaagcgcaatcttcgcaagt
gaccatcctcaaacttctcgcgcggatcgcgccccttctatttcttccgaaggcaccgta
gctacaagcagcgatacgaccgaccaggacaaacgtctcaacaagtcggcgaccggtgcg
accaagcccacgttctgctcaacgcccaagcaaacgctgcacgtccgaagggccagcgcc
aagtcccgcgaacaaccggaagaggacagtatctactcggcgacgtctgcgaaaaagtcc
aagcccgccgagaagcgcgccagcagcggaggcgactcttcggacgagtgtgacgacggc
gagtcgcgctccaaacggtccaagtcctaccactcggacgcaagcagcaccaaaagttcc
aaaaagcagcgcagcaaaaaacgccgcaagaaggactccgaacactactccgatgaggac
tttgcgtcgattctgaccgacatcgtgcaggcgatttcggaaaacgaaggcgacagttcc
gacgagccaccagcagagccagaagtggtcgccgaaccggtggagaacatcacggacagt
gacatcctcgaaatcaaagaccaggaaccaaacacaatcagtctacctcaggttgagccg
cgggaaaactttgtcaaagctccctcgccggaagcgctggacgatagcaacgacgtggtg
gccatcgaaccacccccaccgccaatgatcaatctggccgacgaagacacgcgggacgtt
tcgggggaaagagcggaatacgagcgcattcccgggctccgtcgcatcgacgacgatccc
gagtgctgctggaacgaagagatgaaaaagttttacaatgattcgtggaactgcgaagac
tttaacgtgtccaccgtgctgttcaacatgccgcgtcaaaccaaacactggcccatcgta
cacaaggacaaatttccggacccgccgaaaaaggagatcatctgcaacaactgccaacaa
ccgggccacatgaagtacaagtgccgccggccaccgaaaccaccgacctgttacatgtgc
ggcctaaccggtcaccaggagacgcgctgccccaacacgctgtgccttaggtgtggagaa
aagacgaacaacttcctgcgcggatgtcacgcgtgttcccgcgagcagcacatgacgtgc
catctgtgcggaatccgcggacacgcgcagcgcaactgcccggacaagtggcgccgctac
cactccacgatcgaagtcgataggccactcacgcgcgactaccagcgcaatccgaacgcg
cgcagttgctgcatttgtgcccggccgggccaccaggcgcacgcatgtcacgccgcggtg
cgcatttttggccagtgcgttccgacgacggagatcatcaactaccagccgatgtactat
ccggaacggcagcagcagcaggagcgggatgaacagggaccgcggtttaacttgtttagc
gaggtgggtgattttcagctgaacttcgacgattcgatcgcgaagaatgagaacagcttc
taccatcggttctccaagtcggtgggactgctggagaagaaaaagaagcaggaggagcgg
ttggcccggaagatgaagcgggatgcgaagaggcgtaagaaggaggcggggggtggtgat
gaggatgtcgttgaaatggttcctggagaggaatcggttgggaagatagctgaagaggaa
gttggtggtgctgctgctgggagcaagtctacagccactgccgtagcgaatgaagattcg
aattatagtttttcggagttttacgaagataaggccggcaagcagcagccgcagtctgcg
ctgtcgagcgaaccgatgccggatttcatcccgctgacatcgccggatgaaagtgcgaat
catgcgttcgcagttccggccaatgtggagcagaacacggaggcgaaaatttacctcacc
aaaccgcacgccaagattctgctcggtccacacggggccaacttcctgaaggatgcgtcc
gccaagttcaccctcaagctcagcatagcgttccaaccggttggaaacgtcctgctggcc
aacggtttgtcccaaaatcaggacaacttccacaacgacctggtcaagttcctcaacagc
gcatcgcaccaaaacgagcagatcaagcagatcaacaacgtccccaagggaacggacaag
accatccgttacatcgtcgagcatctgcagctgcttacgcgttcgtacgaaaacgttaaa
agcatgttccgtcgctaccagcactgcgaacaacagggcacgaacccgaaaacctgcgac
aaagtccgtcgcaacctcaacatcattctgtttggtcagttcggcatgcggcaagggcgc
gatcacctcaaccagttgcagagcaacctccaagagctgaaggacaccgcaaacccgatc
gtctcgctcgaaacccgagaccaaatcaaccagcacatccggtacatcttcacctcgtac
gaccacgccgactacgaggacattatgcaagagtacgacgcgctgcgaaagtcccaaaag
ctgtccaaagtcaagccggaagatctgaaccttacccttcccgccaagctgaacctcctc
accatcgtagacagcaaagaagccgacgatcccgacgactcgtcgttcaacgtgtccaaa
gagttcagcttcgacgactcctcactcccaagcgacctgatcctcaacacgtccgatcaa
ctgatcgacgacgctgaaccaccgaaacgcgaagaagaagaggcgcaagtaacgcctccg
gcggcagtggaagagacccccatcagtggcgcaggctcgtcggcggctccgtcgtccaaa
cagtccaaggtggagtttctgctgaacgattgtcgccagatggtgaaggtgctggacaat
aagccgatcacggccaagttcgacctgatttacgagcaaacgcgcgagggaaatgtgtcc
aaggcgaactatcgcacgctgatggggattcatggcattctgaagagtaagttgtatcgg
aagagaaagaaaaataagatggccaatagttga
DBGET
integrated database retrieval system
