KEGG   Culex pipiens pallens (northern house mosquito): 120413792
Entry
120413792         CDS       T07310                                 
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
  KO
K10752  histone-binding protein RBBP4
Organism
cpii  Culex pipiens pallens (northern house mosquito)
Pathway
cpii03082  ATP-dependent chromatin remodeling
cpii03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cpii00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120413792
   03083 Polycomb repressive complex
    120413792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpii03036]
    120413792
Chromosome and associated proteins [BR:cpii03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     120413792
  Histone modification proteins
   HAT complexes
    HATB complex
     120413792
   HDAC complexes
    Sin3A-HDAC complex
     120413792
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     120413792
    PRC2.2
     120413792
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     120413792
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120413792
  Chromatin remodeling factors
   NuRD complex
    120413792
   NuRF complex
    120413792
   NuRF complex (fruit fly)
    120413792
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_WDHD1_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML WD_LRWD1 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF12 ANAPC4_WD40 eIF2A Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 MIOS_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 120413792
NCBI-ProteinID: XP_039430676
LinkDB
Position
3:135705150..135707097
AA seq 429 aa
MGDRGDGAEAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKPE
GKDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEI
EIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPEPSGECHPDLRLRGHQ
KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRIIDAKNIFTGHTAVVEDVAWHL
LHESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT
VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAE
DTEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDVP
ASEIEAGAP
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgggtgatcgtggagatggagctgaagccttcgatgatgccgttgaggagcgggtcatc
aacgaggagtacaagatctggaaaaagaacaccccgtttctgtacgatctggtgatgacc
catgcgctcgagtggccttcgctgacggcgcagtggctgccggatgtgacaaagccggaa
ggcaaggactactcggtgcaccggttaatccttggaacgcacacttcggatgagcagaac
catctgctgattgcgagtgtccagctgccgaacgaggacgctcagtttgatgcgagccat
tacgacaacgagaagggcgagtttggcgggtttggatcggtttcgggcaagattgaaatc
gagattaagatcaatcacgagggcgaagtgaaccgagctcggtacatgccccagaatccg
tgcgtcattgccaccaagacgccgtcgagcgacgtgctggtgtttgactataccaaacat
ccgagcaaaccggaaccaagtggcgaatgccatccggatttgcgcctgcgaggacaccaa
aaggagggttacgggctgtcgtggaacccgaacctcaacggctatctgctgtccgccagt
gatgaccatacgatctgtctgtgggacatcaacgccaccccgaaggaacaccggattatc
gacgccaagaacatcttcaccggtcacacggcggtcgttgaggacgtcgcttggcacttg
ctgcacgagtcgctgttcggttccgtggccgacgaccagaagctcatgatctgggacacg
cgctgtaacaacacctccaaaccgtcccacactgtcgatgcacacacggccgaagtcaac
tgtctcagcttcaacccgtactcggagttcatcctggcgaccggttcggccgacaaaacc
gttgccctgtgggatctgcgcaacctcaagctcaaactgcactcgttcgagtcgcacaag
gacgaaatcttccaggtccaatggtcgccccataacgaaaccatcctggcctcgtccggc
accgaccggcggttgcacgtgtgggatctgtccaagatcggcgaagagcagagcgccgaa
gacaccgaggacggaccgcccgagctgctgttcatccacggcggccacaccgccaagatt
tccgacttttcgtggaaccccaacgaaccgtgggtcatctgttccgtgtccgaggacaac
atcatgcaggtctggcagatggccgagaatatctacaacgacgaggaacccgacgtcccg
gccagcgaaatcgaggcgggtgccccgtaa

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