Culex pipiens pallens (northern house mosquito): 120413876
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Entry
120413876 CDS
T07310
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X1
KO
K13191
RNA-binding protein 16
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpii03021
]
120413876
03041 Spliceosome [BR:
cpii03041
]
120413876
Transcription machinery [BR:
cpii03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120413876
Spliceosome [BR:
cpii03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120413876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
120413876
NCBI-ProteinID:
XP_039430787
LinkDB
All DBs
Position
3:159818906..159842763
Genome browser
AA seq
1402 aa
AA seq
DB search
MDTVRIFNQELSGLYEAKPPISKAKMASITRSAMKAIKFYKHVVQSVEKFISKCKSEYKI
PGLYVIDSIVRQSRHQFGTEKDVFAPRFARNMEATFAHLFRCPPEDKSKIIRVLNLWQKN
MVFAPETIQPLFDLANPEHPIHLQYNASLAAGGGGADQSGTGSNGAGGLNTSAMSHDSPG
PMSHDDHHSSGGGGGGGGVGGSQSSDPSKVLDQNTIRQLQQFQQILMRQTSGSASEAAKN
QVKFDKKLLAADFDYGSEDEEDKNSPSVPSTTLLPDGGNIAAILSDPNVLKQLQQLQNLQ
KLKQHEMEEKQSKLTEMRLQEEKFEKHLASVLKVPTNNSTFAAITSSSSISNLTTAHQQL
MKNKLPFANECDLSRQPAIDLNAGLSSSKDGDGDDFGMVTEVISDTHSSSPRSLPPDNTY
KSSTSSRRRKSRSRSRDRGRDRDRGGRSRRSRSRSRSRSHSPRRGGGTSGRGGRGSSRDR
ERERASQKDKERDKERERERKKRGLPEIRKEHLSVCSTTLWVGHLSKLVQQEELSDTFGK
YGDIVSIDLIPPRGCAFIVMNRRQDAHKSMQSLKNHKMHGRTITISWATGKGVKSKEWKD
YWDIELGCSYIPWSKVSHATDLEALEEGGMFDDETMPQWLKDKIANKGAASDPATATAAV
AAAAAAASLINPMYPLDTSQPPPPPTMLAAAGMAGLAGFPLGARLPMMGLPLMAGLGMNV
PPPNLMMAAAANPPPLPMGAGFGALPPPPPSSNVVNLVSGDEMDIEMEDENSNSNHPLQP
PADPSAFFNQPPPPLMPPDFNRNNPMAGLNQQGMDAGGDNNERGGRGNRGNDFDRRGGRG
GDRGRRDFDRDGGGNNSRDGPGGRGRRNFRDGSQEGQDRNEPRQSRWGSNDRNRGGGGGG
GGSDNGRDDRPLSERLRELAGADFSQRNDGNDQQGPGQQQQFGGRNFRGGRNMNNDGDDF
NNRGGDDFGGGRRGGNFQQGGRFQNQRGGRFNNRGGPGGGGGFMHNRQQQQRGGSDGGDM
QQGGPINIMSLIFNNEDMPGGGMDGGNMDPDMIQEQMQQQFFDGGNNNNNNFGNRRGGNN
WNDRGNRGRGGNWRDNNDGGDNSDGGGGRGRFGRRGDQQQRGNQRRNDFGGFGGGDEQQQ
QHHQGGRGGQGGGMRWDENDETWDDLPAAKPRGDNRPPPREDNRPPQRDEPVQQQKPREE
PQRDSQDTGILGGGDEWECDAPTRIAPIFSEPARQEEPPSFGGDSAGGGDSKQDRQEGGN
VTPLFDESAPAPAAAREPEMFRNSSPPPSRVERDPEPEPQRAPSPVPNRPQLYSPSPPPQ
AAPEERFEERSFQQEQQSPQQEQFQPEPEPQRFEPEPVRESAPDPQHFADEAPPPQAEAV
DAGSAAAPPSEESGAPPQTDEA
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggatacggtgcgaattttcaaccaggagctctcggggctgtacgaagcgaagccgccg
atctccaaggccaagatggcctcgataacccggagtgcgatgaaggccatcaagttctac
aagcacgtcgtgcagagcgtcgaaaagttcatctccaagtgcaagtcggagtacaagatt
ccggggctgtacgtgatcgattcgatcgtgcgccagtcgcggcaccagttcggcacggaa
aaggacgtgtttgcgccgcggtttgcccgcaacatggaggcaacgtttgcgcacctgttc
cgctgcccgccggaggataagagtaaaatcatccgcgtgctgaacctgtggcagaagaac
atggtgttcgcgccggagacgatccagccgctgttcgacctggccaatccggagcatccg
attcatctgcagtacaacgcatcgctggccgccggaggtggcggagcggaccagtccggt
acgggctcgaacggtgccggtggcctcaacacgtcggccatgtcgcacgattcgcccggt
ccgatgtcgcacgacgaccatcacagtagcggaggcggcggaggtggtggcggcgtgggc
ggttcccaatcgtcggatccgagcaaagtgttggaccagaacacgatccgccagctgcag
cagttccagcagattctgatgcgccagacgagtgggagcgcctcggaagcggccaagaac
caggtcaagttcgacaagaagctgctggcggcggactttgactacgggagtgaggacgag
gaggacaagaactcgccgtcggtgccgtcgacgacgctgctgcccgacggaggcaacatc
gcggccatcctgtccgatccgaacgtgctgaagcagttgcagcagctgcagaacctgcaa
aagctgaagcagcacgagatggaggaaaagcagagcaaactgacggagatgcgcctgcag
gaggaaaagttcgaaaagcatctggccagcgtcctcaaggtaccgacgaacaacagcact
ttcgctgccattactagctcttcttctattagcaatctcaccactgcccaccagcagctg
atgaagaataaactacccttcgccaacgagtgcgacctgagccggcagccggcgatcgac
ctgaacgcgggtttgtcctcgtccaaggatggcgacggtgatgacttcggcatggtcacg
gaggtcatcagcgatacgcacagctcgtcgccgcggagtctgcccccggacaacacgtac
aagtcgtcgacctcgtcgcgtcgtaggaagagccgctcgcggtcgcgcgatcgtggacgt
gatcgggaccgcggaggtcgcagccgtcgatcgcggtcgaggtcacgcagccggtcgcat
tcgccgcgccgcggaggaggaaccagcggccgaggtggacgcgggtcatcgcgggaccgt
gaacgggaacgggccagccagaaggacaaggaacgggacaaggagcgcgagcgagagcgc
aagaagcgcggactgccggagattcgaaaggagcacctgagtgtgtgcagcacgacgctg
tgggtgggccacctgtccaagctggtccagcaggaggagctgtccgatacgttcggcaag
tacggcgacattgtcagtatcgacctgattccgccccgggggtgcgcctttatcgtgatg
aaccggcgccaggacgcgcacaagagcatgcagagcctgaagaaccacaagatgcacggc
cgcaccatcaccatctcgtgggccaccggcaaaggcgtcaagagcaaggagtggaaggac
tactgggacattgagctgggttgcagttacattccgtggagcaaggttagccacgcgacc
gacctggaagcgctggaggagggtggcatgttcgacgacgaaacgatgccccagtggctg
aaggacaaaatcgccaacaagggcgccgcaagcgatccggcgactgccactgctgcagtt
gctgccgcggcggccgcagccagtctgatcaatccgatgtacccgttggacacgagccaa
ccgccgccaccgcccacgatgctggcagctgccggaatggcaggcctggccggattcccg
ctgggtgcgcgcctcccaatgatgggcctgccgttgatggccggactgggcatgaacgtt
ccaccaccgaatctgatgatggccgctgccgccaatccgccaccacttccgatgggtgct
ggctttggagcccttccgccaccgcccccgtcctcgaacgtggtcaacctggtcagcgga
gacgaaatggacatcgagatggaggacgaaaactccaactcgaaccacccgctgcaaccc
ccggcggacccgtccgcgttcttcaaccaacctccacccccgttgatgccgccggacttt
aaccgaaacaacccgatggccggacttaaccagcagggcatggatgctggcggggacaac
aacgagcgcggtggccgtggaaatcgcggcaacgactttgatcgtcgtggcggacgcgga
ggcgatcggggccgtcgagactttgaccgggacggtggcggcaacaacagccgggatggg
ccgggaggacgcggacggagaaacttccgcgatggcagccaggagggtcaggatcggaat
gaaccgcgacagagccggtggggaagcaacgatcggaatcgcggaggaggaggaggcggt
ggaggaagcgacaacggacgggacgatcggccactgtcggagcgactgcgcgaactggcc
ggggcagactttagccagcgcaacgatggcaacgatcagcaggggccgggacagcagcaa
cagtttggtgggcggaactttagaggtggtcgcaatatgaacaacgatggcgatgatttc
aacaatcgcggaggagatgactttggcggaggacgccggggtggtaacttccagcaggga
ggacgcttccagaatcagcgcggaggtcgctttaacaatcggggaggtcctggaggagga
ggtgggttcatgcacaatcgtcaacagcaacagcgcggtggttcagacggtggcgacatg
cagcagggcggaccgataaacatcatgtcgctgatattcaacaatgaagacatgccgggc
ggcggaatggacggtggcaacatggacccggacatgatccaggagcagatgcagcagcag
ttcttcgacggtggtaacaacaacaacaacaactttggaaatcgccgcggtggaaacaac
tggaatgatcgtggaaaccgaggtcggggtggcaattggcgcgataataacgacggcggg
gacaatagcgatggtggtggcggaagaggtcggtttggtcgccgtggagatcaacagcag
cgcggaaatcaacgccggaatgactttggtggatttggtggaggagatgaacagcagcag
cagcatcatcaaggaggaaggggaggtcaagggggaggaatgaggtgggatgagaacgac
gaaacttgggatgatttgccggcggcgaagccgcgcggggataatcgtcctcctccgcgt
gaggacaatcgtcctccccagcgtgacgaaccggtccagcagcagaagccgcgcgaagaa
ccccagcgcgattcgcaggacacgggaattctcggtggcggcgatgagtgggagtgcgac
gcaccgacgcgcattgctccgatcttttcggaacctgctcgccaggaggagccgccgtct
ttcggtggtgactcggctggtggcggcgattccaagcaggaccgccaggaaggtggcaac
gtaactccgctgtttgacgagtccgcgccggcaccggccgcggctcgcgagccggaaatg
ttccgcaattcgagtcctccgcccagcagagtagagcgtgacccggaaccggagccccag
agagcaccatctccggtgccgaaccgaccccagttgtactcgccttcgccgccgccgcag
gctgcaccggaagagcgctttgaagagcgtagtttccagcaggagcagcagtcaccgcag
caagaacagttccagccggagccggaaccgcagcgtttcgagccggaaccggtgcgggag
tctgctccagacccgcagcactttgccgatgaggcacctcctcctcaggcagaggccgtc
gacgctggttctgctgcggcacctccttcggaggaatccggcgcgccgccgcaaacggac
gaagcttaa
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