Culex pipiens pallens (northern house mosquito): 120413887
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Entry
120413887 CDS
T07310
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpii03000
]
120413887
03036 Chromosome and associated proteins [BR:
cpii03036
]
120413887
Transcription factors [BR:
cpii03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120413887
Chromosome and associated proteins [BR:
cpii03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120413887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DUF7231
Motif
Other DBs
NCBI-GeneID:
120413887
NCBI-ProteinID:
XP_039430794
LinkDB
All DBs
Position
2:14562852..14581146
Genome browser
AA seq
2865 aa
AA seq
DB search
MATAAAEEPDLFNGLEITDMQEINMDNGDEYVLIPSDNENDDDAVVTESGAGVTVVSSKE
HMSGGEAMDLLAGVDLDTLLDKAVSEKTELRIVKSINLAPVQQGCGGGAGGNGGDIDGGS
SRDHGMFTMSYHFNLDTQELFNVGSDEPQHRQEVEQEEEEEEEEMGCGITIKEEIDIEET
VVNFPDDEDDLGAEMELSDVGHVSEEIAISESEDEEDCVLLSLIEHQQHVPIKEERPEED
KSPVENDHAYTSQSLDEPAAVQSCVTVESIVELSQRLLEQAGEDREKRLASIASIEEQVK
LLKEKALSEEVDAPKSLEPEPEPAIESAEINEADNLSVILSENCSEPFEGRSMTDLLATA
SEESVAGRLDTVLEEQEEQQEMEIETNLSKVMSPNRSEPLEHEGDGVADPPPMECDVAED
PPPPTPVPEDAEKDQEEVAPMETEEGDQVEAVQEETPKESETEVQPEEPAIPEKEEPTKK
SLEIASVDDLIEHGELFFQQCELMVDKADEDDSCDKLKQFLAKLTLNVRRLTEKLAPTAT
ADASVQTEKVKLTREKAISLNEKYKRRMLSSLGDVEAVYSDATASSDEGGGGGGAGSEGA
ASSAGEEEDDDEAFARRQDRRKSRRMERKLAQGGEEGEEEDEQDITMPGKKRNARRLDST
DSAKNDEEEDASEPDLSQFLVPKSPTIASSSEPAPGSDDIPVKNEPYSEENSSDTPVAQK
RIIRTSSVEYSATIREGEASSPSDGQRMDVDGEDSTSKSTAPKQEEDSKDDEQSDSELLD
DVLPQVDDILLDVDDILPAAEGVVQDYLVEEEVRTEERKTEAPSKTAENKPKKSTGKKID
SEEEAEEESEDDAPKGKALEDMTESELEEYYDNLREKEIDKLCNLTNLEVSRNANPQKPQ
DAAVKKKLPPPVVNKKKDRDDLYDILKDNAELHGSGDDSDSASEVVETEELYLQQCNQNM
KNQLLNQLSSSDTELDSGGSDEDGVVEALRRGGDDSDDSAGSILMEKFLKSLNKEHGEGE
DEEEGSGNEGEKQEVEEGSKPSVVEEDADKTKESEVEEDGGAMEKDNEDAIERMKNSLKK
SEQKTTSGETKGSPKKDGGSASKTTAVDPLDKQLFSKKMFRDVDETLRRDRDREAFGREN
GSATSRSERVVSEDSDVELLDVSMFQPKRKLKEKTLEDFDFSATTKRATPQLKRKDTKED
DCISLSSESEAEVEETNEADEKENKKGRIRTMLTQDQLADETKTAQKDEVVRVAQLKKKN
EQLTKFMETFKPGPDESKMVLDYDAKRKQAICVHPHIEKLLKPHQREGVRFMYDNSYGSV
NYINKHPGSGCILAHCMGLGKTLQLITLLHTVMRFPQLKTRRVLVICPKSTVMNWSDEIQ
HWLGSLKSGPRLKVFYFPDNADVNDKLKVLGDWYASNENRCGCMLIGYEAFRVLVNYEKR
KRTPSNFLAAKAAFVKKRVDEYLLDPGADLVICDEGHQIKNKKSAISGAVSQIKTKRRIV
LTGTPIQNNLKEYYCMVNFIKPSFLGSDREFNNLYANPIKNGQHKDSDSRAIKIMKQRSF
VLHNKLSKFVQRREAGVLKEFLPEKFEYVLFVPLTPVQEKMYEVFLQMNEYTTATGEAVS
EGARGKKFKLLADYTSLRKIWTHPKVLEKAWETAVQEKNKRDARFRLTASPDSDDDRPDD
YNDISSGALSVTNDWWRKHLGVNDLESLYPSNKLRIMFEILKQCHERGEKCLIFSAFVAV
LNVVEHFMAKIHNQQNDPAADVYGYGSFRGPWEPGKDYYRLDGKTQKNIRHKMITSFNDP
SNKRTKCFLISAKAGGQGINLIGANRVIILDTSWNPSNDQQNIFRIFRLGQKRKCYVYRL
LAMGTMEEKVYSRSVTKQAMSFRVVDEQQIDRHYSFSELAELYNLSKVEDQVRETPILPA
DDVLAYLLRNLPKSAFKYHVHDSLLENKPEQDLSEEEKNEAWAAYEREIQNNEKPSYLGN
LGMMQNFMGAAGAFPGASGSGLGPYSAINYPGLPGALADMYRNDFRYSSSMNQLMYPYAN
ASFPSLMSDPSYSSIMGKQPAYGNFNLPGASPSASGIPDFALSAALNGQSSSGGGPGTSS
YNTNVALQSLLELYSKSLSSSMNNSTTVTTATATSVSPSTTTSPYSALSALKQFNGFGPP
PMHHPGSPAPQSHSSPAPPPASSSQSPSSSGNAALINMLNEQPMPMSSAASSGPFSHLSS
PLPAPTITPLPSRSTPSAATTVTTMATSTPVLSSASPSTVSKSVIATAPPPPAQLPLPPL
NIPKPTLSSSSSVAKNNDPKPVPLTTTIVASDDDDVDDDGIPRPHIIVRDPSSINATSAK
PGAQDKEKVVKKNLNMGIVYPAEKKKDNTKDIMLSAKSITTLTKPTIAVKNVDSMKSSKG
SANSPVHIAPRPSPKQARPPPYSLPRASPSNSRPQHPPLIRTPLTIGGSSSIIAKPQPAT
ANNSTTPRQQQVPVITNAKSLQLQNSPSSSPFSLQQKISNPSPTASSSNAAASPTLPRGS
IAAQQLRELQQRMNSAGTSSNLIASNTNSHLAMAKAKKQLQQAQRQQQHQQSPSRPVPVG
LFPSQATTSTTTSIVNQQLPKGLASTSPGAARLTMTGNKPASQTNMSPLSDSVSITKITS
TGQRIAISNPPSSTVAAASGAGTNNAAAMSFLSGNLGRKQDLVITKTIGGGAGTAVRKVL
PGPNMVVKTSQDMTVAPSLKRPFSTLTPTAMKSTLGQSPLSSAAAPPPSLSMATVSAAAG
GGMRAGPVTPNSITVRKRKAPVPGSGADQPSPTLIDSLKAKNNSITISEVRSIYSPPAAK
KPTPSIPIQPQKRLGSGITITPRKPTAATQQQQQPQNVLEVVEIE
NT seq
8598 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccgccgccgaggagcctgacctgttcaacgggctagagatcacggacatg
caggaaatcaacatggacaacggcgacgagtacgtgctgatcccgtcggacaacgagaac
gacgacgacgcagttgtcacggagagtggtgctggtgtcacggtagtgtcgtccaaggag
cacatgtccggcggggaagctatggacctgctcgccggggtcgatttggacacgttgctg
gacaaggccgtcagcgaaaagaccgagctgcggatcgtcaagagtattaacctggcaccg
gtgcagcagggttgtggaggtggtgctggtggaaacgggggagacattgacggtggttcg
agtcgtgaccatgggatgtttacgatgagttaccactttaacctggacacgcaggagctg
ttcaatgtgggttcggatgagccgcagcatcggcaggaagtggagcaggaagaggaagag
gaggaggaggagatgggttgtggcattacgatcaaggaagagatcgacattgaggaaact
gtggtgaactttccggacgatgaggacgacctgggtgcggagatggaactgtcggatgta
ggtcacgtgagcgaggagattgccatttcggagagtgaagacgaagaggattgtgtgctg
ttgtcgctgattgagcaccagcagcacgttccgatcaaggaggaacggccggaagaggac
aagagtccagttgagaatgatcacgcttatacgtcgcagtcgctggatgaacctgcggcg
gtgcagagctgcgttaccgtggagagtattgttgaactatcgcagcgattgctggagcaa
gctggtgaagatagggagaaacgattggccagtatagcaagtattgaggagcaggttaag
ctgttgaaggagaaggccctctcggaagaagttgatgcgccgaagagtcttgaacccgaa
ccagaacctgcaattgaatccgctgaaatcaacgaagcggacaatctctcagtgatcctg
tcggagaactgttccgaaccgtttgagggtcgctcgatgacggatctgctggcgaccgcg
agtgaagaaagtgtcgctggtcgcctcgataccgttctggaggagcaagaggaacagcag
gaaatggagatcgaaaccaatctgtccaaggtaatgtccccgaaccggtcggaaccgctc
gagcatgaaggggacggcgtcgccgatccgccgccgatggagtgtgacgttgctgaagat
ccacctcctccgacaccggttccggaagatgctgagaaggatcaggaagaagttgctccg
atggaaacagaggaaggtgatcaggtagaagcagttcaagaagaaactccgaaggagtcc
gaaactgaagttcaaccagaagaacctgctattccggagaaggaagaaccgaccaaaaag
agtctcgaaattgccagcgttgacgatctgatcgagcacggcgagttgttcttccaacag
tgcgaactcatggtagacaaagctgatgaggacgacagctgcgacaagttgaaacagttc
cttgcgaaactaaccctcaacgtgcgaaggttgacggagaagctcgctccaacggcgacg
gccgacgcgtcggttcaaaccgaaaaggtcaagctgacccgggagaaggccatttccctg
aacgaaaagtacaagcgacggatgctcagctcgctgggagatgtagaggcggtgtacagc
gatgcaacggccagtagcgatgagggcggtggtggtggtggagcaggttccgaaggtgcg
gcatccagcgcgggtgaagaagaggacgacgatgaagcgttcgcgcgacgccaagatcgg
agaaagtcgaggcggatggagcgaaagttggcgcagggtggtgaagagggtgaggaggag
gatgagcaggacattacgatgcccggtaagaagcgaaacgctcgaaggttggacagcacc
gattccgcaaagaacgacgaagaagaggacgcttcggagccggatttgtcgcagtttttg
gtgccgaaatcgccaacgattgcgtcgtcgtcggaacctgcccccggaagcgacgacatt
ccggtcaagaatgaaccgtactccgaggagaacagctcggatacgccggtggcgcagaag
cgaatcattcggacgagtagcgtggaatattctgcgaccatccgggaaggcgaggcgtcc
tcgccatcggacgggcaacggatggacgtggacggggaggattcaacgtcgaaaagtacg
gcgccgaagcaggaagaagactccaaagacgacgagcagtccgacagcgagctgctggac
gacgttctgccccaagtcgacgacattctgctcgacgtggacgacatcttgccggcggcg
gaaggcgtcgtacaggactaccttgttgaggaagaggtgcggacggaggagcgtaaaacg
gaagctccaagcaagaccgctgagaacaaaccaaagaagagcaccggcaagaagatcgac
agcgaagaggaagccgaagaagagtcggaagatgacgcgcccaagggtaaggccctcgag
gacatgaccgagtccgagctggaagagtactacgacaacctgcgggagaaagaaatcgac
aagttgtgcaacttgaccaacctggaggtttcgaggaacgcaaacccgcaaaagcctcag
gatgccgcagtcaagaagaagctcccgccgccggtggtcaacaaaaagaaggaccgcgac
gatctgtacgacattctgaaggacaacgcggaactgcacggcagcggcgacgacagcgac
agtgcttcagaagtggttgaaacggaggagctgtacctgcagcagtgcaatcagaacatg
aagaaccagctgttgaaccagctgagcagcagcgacaccgagctggattcgggtgggagt
gacgaggacggggtggtggaggcgttgcgacgaggcggtgatgattccgacgattcggcg
gggtcgattctgatggagaagtttttgaagagtctgaacaaggagcacggcgaaggggag
gatgaggaggagggcagtgggaacgagggtgagaagcaggaggtcgaggagggaagcaag
ccttctgtggtggaggaggacgcggacaagacgaaggagagcgaggttgaagaagatggt
ggcgcgatggaaaaggacaatgaggacgcgattgagcggatgaagaactcgctgaaaaag
tcggaacagaagacgacgtctggagagacgaagggtagtcctaagaaggacggtggttcg
gcgagtaaaacgacagccgttgatccgctggacaagcagctgtttagcaagaagatgttc
cgggatgtggatgagacgctgcgacgtgatcgggaccgggaggcgtttggacgggagaat
ggttcggcgacgagccggtccgaacgggtagtcagcgaagactcggacgtggaactgctg
gacgtgtcgatgttccagccgaagcgaaagctcaaggagaagacgctggaggactttgac
tttagtgccacgacgaagcgggcgactccgcagttgaagcgcaaggacactaaggaggac
gactgcataagcttgagttcggagagcgaagcggaggtagaggagaccaacgaggcggat
gagaaggagaacaaaaagggtcggatacggacgatgctgacgcaggaccagcttgcggac
gagaccaagaccgcgcagaaggacgaagtggttcgggtggcccagctcaagaagaagaat
gaacagttgaccaagtttatggaaacgttcaagcccggcccggacgagagtaagatggtg
ctggattacgacgccaagcggaagcaggccatctgcgttcatccgcacatcgagaagctg
ctcaagcctcaccagcgagaaggtgtccgattcatgtacgacaacagctacggcagcgtg
aactacatcaacaaacaccccggttccgggtgcatcctagctcactgcatgggcctcggc
aaaacgctccaactgatcacgctactccacacggtcatgcgattcccgcagctcaagacc
cgtcgcgtactcgtaatctgccccaagagcacggtcatgaactggtccgacgagatccag
cactggctgggttcgctcaagagcggtccccgactgaaggtgttctacttcccggacaac
gccgacgtcaacgacaagctcaaagtcctcggtgattggtacgcctcgaacgagaaccgc
tgcggctgcatgctcatcgggtacgaagcgttccgcgtgctggtcaactacgagaagcgc
aagcggacgccctcgaacttcctagcggcgaaggccgccttcgtgaagaagcgcgtcgac
gagtacttgctggatccgggcgccgacctggtcatctgcgacgagggccatcagatcaag
aacaaaaagtccgccatcagtggggccgtgtcgcagatcaaaaccaagcgacggatcgtc
ctgaccgggacgcccatccagaacaacctgaaggaatactattgcatggtgaacttcatc
aagccgtccttcctcggcagcgaccgggagtttaacaacctgtacgcgaaccccatcaag
aatggccagcacaaggactcggacagccgggcgatcaagatcatgaagcagcgctcgttt
gtgctgcacaacaagctgtccaagtttgttcagaggcgagaggccggcgtcctgaaggag
ttcctgccggaaaagtttgagtatgtgttgttcgttcctttaacgcccgtccaagaaaaa
atgtacgaggtgtttctgcagatgaacgagtacacgacggcgaccggtgaagcggtcagc
gaaggcgctcgggggaaaaagtttaaactgctggcggattacacgtcgctgcgaaagatc
tggacccatccgaaggtgctggaaaaggcgtgggagacggccgtccaggagaagaacaaa
cgggacgcccgcttccggctaaccgcttcgcccgactcggacgacgatcggcccgacgac
tacaacgacatctcgtcgggtgcactctccgtgacgaacgattggtggcgcaagcatctg
ggcgtcaacgacctggagtcgctctacccgagcaacaagctgcggatcatgttcgagatt
ctgaagcagtgccacgagcgcggggaaaagtgtctcatcttttccgcgtttgtggccgtg
ctgaacgtggtggagcactttatggccaagattcacaaccagcagaacgatccggcggcg
gacgtgtacgggtacgggagctttcgggggccgtgggaaccgggcaaggattactaccgg
ttggacgggaagacgcagaagaacattcgccacaagatgattacgtcgttcaacgatccg
tccaacaagcggacgaaatgctttttgatttcggccaaggccggtggacagggtattaac
ttgatcggagcgaatcgggtgattattttggacacgtcgtggaatccgtcgaacgatcag
caaaacatcttccggatattccggcttgggcagaagcgcaagtgttacgtgtatcgactg
ttggcgatgggcacgatggaggagaaggtgtactcgcggtccgttacgaaacaggcgatg
agtttccgggtggtggacgagcagcagatcgatcggcactacagcttctcggagttggcc
gagttgtacaatctgtcgaaggttgaggaccaggtgcgcgaaacgccgattcttccggcg
gatgatgtgttggcgtacctgctgagaaatctgcccaagagtgcgttcaagtaccacgtg
cacgattcgttgttggagaacaaaccggagcaggatttgagcgaagaggagaagaacgag
gcgtgggcggcgtacgaacgggaaattcagaacaatgaaaaaccttcgtatttgggcaac
ttgggcatgatgcagaactttatgggtgcggcgggagcgtttccgggtgcttccggatcg
gggttgggaccctactcggcgattaattatcctggattgccgggagcgttggcagacatg
taccggaacgactttaggtacagttccagcatgaaccagttgatgtatccgtacgcgaat
gcgtcgttcccttcgttgatgagcgatcctagctattcgtcaatcatgggaaagcaaccg
gcgtatgggaattttaacctgccgggggcgtcaccttccgcaagtggcataccggacttt
gccctgtcggcagcgttgaacggtcagagctccagcgggggtggtccaggaacgagcagc
tacaacaccaacgtagcgctgcagagtctactggaactgtacagcaagtccctctcgtcg
agcatgaacaacagtacgacggtcacgacggcaacggccacttcggtgtcaccgagcacg
acgacttccccgtacagtgcactgagtgcgttgaagcagttcaacgggttcggtccacca
ccgatgcaccatcccggatctccagcaccgcaatcacattcctcccctgcaccaccaccg
gcctccagctctcaatccccaagtagttccggtaatgccgccctcatcaacatgctcaac
gaacaacccatgcccatgtcatcggccgcatcatccggaccattctcccacctcagctct
ccgctgccagcgccgacaatcactccgttaccttcgcgcagcactccgtcggcggccaca
accgtcaccacgatggccacttccacgccagtattaagctccgcctccccttcgaccgtg
tccaagagtgtcatcgctacggcaccacctcccccagcgcaacttccactaccaccgctc
aacataccaaagccaacgctttcgtcgtcttcgtccgtggcgaagaacaacgatccaaag
ccggttccactcacgaccacgatcgtggccagcgacgatgacgacgtggacgacgatggc
atcccgaggccgcacataatcgtacgcgacccatcgtcgatcaacgcgacctcggcgaaa
cccggcgcccaggacaaggaaaaggttgtgaagaagaacctcaacatgggcatcgtctac
ccggcggagaagaagaaagacaacaccaaggacatcatgctcagtgcgaagagtattacg
acgttgacgaagccgacgatcgccgtgaagaacgtagacagcatgaaatcttccaagggt
agcgcaaactccccggtacacattgcgccgaggccatcgccaaagcaagcccgcccgccg
ccatacagcttaccgagggcgtccccaagcaacagtcgaccacaacaccctccactaatc
cgtactccactcacgatcggcggctcgtcatccatcatagctaaacctcaacccgccacc
gccaacaactccacaaccccccgccagcagcaggtcccagtcattacgaacgcaaaatcc
ctccaactgcaaaactccccctcctcgtcgccattcagcctgcagcagaaaatctcaaac
ccgtcgccgactgcttcgtcttccaacgctgctgcctctccgacacttccccgcggttcc
atcgcggcccagcaactgcgcgaacttcaacaacgaatgaacagcgccggcaccagcagc
aaccttatcgctagtaacaccaactcgcacctggcgatggccaaggcgaagaagcaactg
cagcaggcgcaacgacaacaacagcatcaacaatcaccgagcagacccgttccggtggga
ctcttcccctcgcaggcgacaacttcgacgacgacgtccattgtcaaccagcagcttcca
aagggtttggcaagtacaagtcctggagcggcacggctgacgatgaccggtaacaaacct
gccagccaaacgaacatgtcccccctgtcggatagcgtgagcataacgaagatcaccagc
accggtcagcggatagcgatcagcaatccgccgtccagtacggtggcggccgcctcgggc
gccggaaccaacaacgctgcggccatgtcgttcctcagtgggaatcttggccgcaagcag
gacctcgtcataacgaaaaccattggcggcggtgcaggcactgccgtgcggaaggtcctt
cccgggccaaacatggtggtcaagacgtcgcaggacatgaccgtggcgccgagcttgaag
cgacccttctccaccctgactccgacggccatgaagtccacccttgggcagtcgccgctc
tcatcggcagcagcaccacctccatcgctatcgatggccaccgtcagtgcggcggcaggt
ggtgggatgcgcgcaggacccgttacgccaaacagcataacggtgcggaagcgcaaggca
ccggttccgggttccggcgcggaccagccctcgcccaccctcatagacagcttaaaggcg
aaaaacaattcgattaccatctctgaagtaaggtcgatttactcgccaccggcggccaag
aagcccactccgagtattccgattcaaccgcagaagcgattgggcagcgggatcaccatt
acgcctcggaagccgacggccgcaacccagcagcagcagcagccacaaaacgtcctcgag
gtggtcgaaattgaatga
DBGET
integrated database retrieval system
