Culex pipiens pallens (northern house mosquito): 120414153
Help
Entry
120414153 CDS
T07310
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120414153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpii03041
]
120414153
Enzymes [BR:
cpii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120414153
Spliceosome [BR:
cpii03041
]
Complex A
U2 snRNP components
U2 related factors
120414153
Complex B
120414153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
KH_12
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
120414153
NCBI-ProteinID:
XP_052567630
LinkDB
All DBs
Position
1:37334448..37342812
Genome browser
AA seq
872 aa
AA seq
DB search
MTRPGENGRGDHRRSRSRSPQDRKKRRSKSRDRDRDRGSERSSGKTSFRISGGGSSSSSS
SASRNRKAERERDRSDREQRDWERDRELERERNREAERKREREREREKLREQATKYAQSV
SSSGAGSSSGSSGFRQSKFDQKPPGFVEKEVKKPPKEEPKEEKESFDLAGPMDKEEEQRR
LEQEMIKRRERIERWRAERKRKEVEIKKPGGGSGINVPKKWSLEDDEEDDDDDGEGKGSA
NDGEDDVDPLDAFMKEVNEEVRKVNKITGPAPKAAEGKAATSSGVTIITGVAKKNTETVK
KGELIEQNQDGLEYSSEEEQEDIKDTAANLANKQKKELAKIDHSGINYLPFRKVFYVEVP
EIAKMTQTEVDAYKAELEGINVKGKGCPKPIRTWAHCGVTRKEFDVLRKLGFEKPTPIQC
QAIPAVMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPPLEEAEGPIAIIMSPTRELCMQ
IGKDIKKFAKSLNLRAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNL
RRVTYVVLDEADRMFDMGFEPQVMRIIDNIRPDRQTVMFSATFPRQMEALARRILKKPVE
IQVGGRSVVCKEVEQHVVVLEEDAKFFKLLELLGLYQELGSIIVFVDKQENADILLKDLM
KASYPCMSLHGGIDQFDRDSTIIDFKQGRVKLLIATSVAARGLDVKQLILVVNYDCPNHY
EDYVHRCGRTGRAGNKGFAWTFLTHEQGRYSGDIIRALELSGGTIPDDLRQLWETYKTTQ
EEQGKKVHTGGGVACVGSFPEYSEAGLTVRGTYVPPGKNPPEGERKLYLAIESCSELAVT
KAKREITRLIKEELLKLQASHHIVNKSRYKVI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgacgagaccaggcgaaaatggccggggtgaccaccggcggtccagatcgcgcagcccg
caggaccggaagaagcgccgctccaagagccgcgatcgtgaccgagaccggggcagtgag
cgtagtagcggcaaaacgtcgttccggatttccggaggaggcagtagcagctcttcgtcg
tcggcgtcccggaaccggaaggcggaacgggaacgggaccgcagtgacagggagcagcgc
gactgggaacgggaccgggagttggagcgtgagcgaaatcgggaggccgaacggaagcgg
gaacgcgagcgggagcgggagaagctgagggaacaggcgaccaagtatgcacaaagcgtc
agcagcagtggagcaggttccagcagcggcagtagcggcttccggcagtccaaatttgac
cagaagccgccgggcttcgtggagaaggaagttaagaagcctccgaaagaggagcccaag
gaggaaaaggaatcgttcgatttggccggtccgatggacaaggaagaagagcagcgaagg
cttgaacaggagatgattaaacggcgagaacggatcgaacggtggagagcggagaggaag
cggaaggaggttgaaattaagaagcctggtggcgggtcgggaataaacgttccgaagaag
tggagcttggaggatgatgaggaggacgatgacgatgatggagagggcaagggtagtgcc
aatgacggggaggacgatgtcgatccgttggacgcgtttatgaaggaagttaatgaggag
gtgaggaaggtcaacaagattacgggaccggcaccaaaggcggcggaaggcaaggctgcg
acctcttcgggagttacaattattaccggagtagccaagaagaatacggaaacggttaaa
aagggcgaactgattgagcaaaaccaggacggactcgagtactcttccgaggaggagcag
gaagacattaaggacactgcggccaacctggccaacaagcagaagaaagaactcgccaaa
atagaccattccggaatcaactatcttccgttccgtaaggttttctacgtagaagtcccg
gagattgccaaaatgacccaaaccgaagtcgacgcgtacaaggcggaactcgaaggcatc
aacgtcaaaggcaaaggctgccccaaaccgatccggacctgggcccactgcggagtcacc
cgcaaagaatttgacgtcctccgaaagctaggcttcgagaaacccaccccaatccagtgt
caagccatccccgcggtcatgtccggccgagacctcatcggaatcgccaaaaccggaagt
ggcaaaacgctggccttcatcctgcccatgttccggcacgtgctagaccaacccccgctg
gaggaagccgaaggcccaatcgcgatcatcatgtccccgacgcgcgaactctgcatgcaa
atcggaaaggacatcaaaaagttcgccaaatcgctcaatctacgcgccgtatgcgtctac
gggggcaccggcatctccgagcaaatcgccgaacttaaacgcggcgcggaaatcatcgtc
tgcacgccgggccgaatgatcgacatgctagcggcgaattccggtcgcgttacgaaccta
cgccgagtaacgtacgtggtgctggacgaagccgatcgcatgttcgacatgggcttcgag
ccgcaggtgatgcgcatcatcgacaacatccggccggaccggcagacggtcatgttcagc
gccacgttcccgcgccagatggaggcgctggcacggcggatattgaagaaaccggtcgag
attcaagtcggaggacggtcggtggtttgcaaggaggtcgaacagcacgtggtggtgcta
gaagaggacgccaagttcttcaagctgctcgagctgctcggactgtaccaagagctgggc
agcatcatcgtgttcgtggacaagcaggagaacgccgacatcctgcttaaagatctgatg
aaggcttcgtatccgtgtatgagtctgcacggtggtatcgatcagttcgatcgggattct
acgattattgactttaagcagggacgggttaagctgctgatagcgacttccgtggcggct
cgaggactggacgtgaagcagttgattctggtggttaattacgattgtcccaatcactac
gaggactacgtgcacagatgcggtcgcacgggtcgcgccggcaacaaaggtttcgcgtgg
accttcctcacgcacgagcagggccgctattcgggggacattatccgtgcgctcgagctc
tccggcggtaccattccggacgatctgcgccagctgtgggaaacgtacaagacaacgcag
gaggagcagggcaagaaggtccacaccggtggtggggtggcctgtgtcgggagtttcccc
gagtattcggaggcgggccttacggtgcgcggtacgtacgttccgccgggtaagaacccg
cccgagggcgaacgcaagctgtatctggcgatcgagagctgctcggagctggcggtgacc
aaggcgaagcgtgaaattacgcgcctcatcaaggaggagctgctgaagctgcaggcgtct
caccacatcgtcaacaagtcgcggtacaaagttatttaa
DBGET
integrated database retrieval system
