Culex pipiens pallens (northern house mosquito): 120414203
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Entry
120414203 CDS
T07310
Name
(RefSeq) histone deacetylase HDAC1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03082
ATP-dependent chromatin remodeling
cpii03083
Polycomb repressive complex
cpii04213
Longevity regulating pathway - multiple species
cpii04330
Notch signaling pathway
cpii04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120414203
03083 Polycomb repressive complex
120414203
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120414203
04350 TGF-beta signaling pathway
120414203
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
120414203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpii03036
]
120414203
Enzymes [BR:
cpii01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120414203
Chromosome and associated proteins [BR:
cpii03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
120414203
HDAC complexes
Sin3A-HDAC complex
120414203
BRAF-HDAC complex
120414203
REST complex
120414203
SHIP complex
120414203
MiDAC complex
120414203
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120414203
Heterochromatin formation proteins
Other heterochromatin formation proteins
120414203
Chromatin remodeling factors
NuRD complex
120414203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
120414203
NCBI-ProteinID:
XP_039431222
LinkDB
All DBs
Position
3:80412506..80421302
Genome browser
AA seq
489 aa
AA seq
DB search
MQSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAD
EMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAV
KLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDG
VEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGRGKYYAVNIPLRDGMDDESYESIFV
PIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGG
YTIRNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHISPSNMSNQNTTEYLEKI
KNRLFENLRMLPHAPGVQVQAIPEDAVNDESEDEDKVDKDERLPQTDKDKRIVPDNEFSD
SEDEGEGGRRDNRSYKGGARKRPRLEKEPKAEEAKDELEVKAETTADKEETTSTKAGEDS
KKETTATVA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctcacagcaagaagcgcgtttgctactactacgacagcgacatcggcaactat
tactatggccagggacatccgatgaagccgcaccggatacgtatgacgcacaacctgctg
ctcaactatgggctgtaccggaagatggagatctatagaccacacaaggcaaccgccgat
gaaatgaccaaattccactccgacgactacatccggttcctgcgatcaatccgtccagat
aacatgtctgagtacaacaaacagatgcagcgattcaacgtcggcgaggattgtccggtg
tttgacgggttgtacgagttctgccagctgtccgccgggggttccgtggcggccgccgtc
aagctgaacaagcaagcgtccgagatctgcatcaactggggcggagggttgcatcacgcc
aaaaagtccgaggcgtccggcttttgctacgtgaacgacatcgtgctgggcattctggaa
ctgctcaagtaccaccagcgcgtgctgtacatcgatatcgacgtgcatcacggcgacggg
gtggaggaggcgttctacacgacggaccgcgtcatgaccgtgagcttccacaagtatggc
gagtacttcccgggaacgggagatctgcgggacattggtgccggcaggggaaagtactac
gcggtgaacattccgctgcgcgacggaatggacgacgagtcgtacgagtcgatctttgtg
ccgattatttcgaaggtcatggaaacgttccagccgtcggcggtggtgctccagtgcggt
gccgactcgctgaccggcgaccggctcggctgcttcaacctgaccgtcaagggccacggc
aagtgcgtcgagtttgtgaaaaagtacaacctgccgttcctgatggtgggcggcggcggc
tacacgatccgcaacgtgtcccgctgctggacgtacgagacgtcggtggcgctgggctgc
gagattgcgaacgagctgccgtacaacgactacttcgagtactttgggccggactttaag
ctgcacatcagcccgagcaacatgagcaaccagaacacgacggagtatctggagaagatc
aagaacaggctgttcgagaatctgcggatgttgccgcacgcgccgggcgtgcaggtccag
gccatcccggaggacgccgtgaacgacgagagcgaggacgaggacaaggtcgacaaggac
gaacggctgccgcagacggacaaggacaagcggatagtgccggacaacgagttttccgac
tcggaggacgagggcgagggcggccggagggacaaccgctcgtacaagggtggcgcccgg
aagcgaccgcggctggagaaggaaccgaaagcggaggaagccaaggacgagctcgaagtg
aaagccgaaacgacggcggacaaagaggagaccaccagcaccaaagcgggcgaagactcg
aagaaggaaaccactgccactgttgcatga
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