Culex pipiens pallens (northern house mosquito): 120414249
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Entry
120414249 CDS
T07310
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120414249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpii03400
]
120414249
DNA repair and recombination proteins [BR:
cpii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
120414249
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
BHD_1
Rad4
BHD_2
Motif
Other DBs
NCBI-GeneID:
120414249
NCBI-ProteinID:
XP_039431300
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Position
3:156473198..156477139
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AA seq
779 aa
AA seq
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MDPGKRSLRDKIFSRLPKTARTEPPVAVEETSNPPLQPTQQSEREPEVDSDGSSSVGDHL
VNLEDIDLDAQFFSQEFRSENVASIEERIPPEVLSSGSDGEGDAEERGRICEMLTQLAQF
NSDAVREVAERNREIDAAVDVGMDEEEILRSIHKVEGIKTVEQKEGSDGEWELIKALNVE
EAKGKDVEVTITQRKTGKNGKIIDVDACLKRLLQSERRDKFLHTHQVHLLCMLGRGFYLN
KLVNQAVSDCSQEIVQLLNIQQDEVPAEPDFNYLKSVCDICQKIRRVDEFSNSCRKMFSA
ILSPDEAFVLLSITILRFLAIEARLVMYLNVISKAMVQEPKPKPQPKAKSKPPTEPPTQR
YTDVALTTSEILKRKPEFAHFSQVPQLDGADDAPVEPKRPRLWKLKQSAPARVSVSSGKP
KRGTTSKFFNRSKAKLTKKPVTDQQPKLSLWIEVYLTAEKCWTPVDILSNQVGLAHVMKR
LPDPAVYVFGWSNDGTLQDVSGRYWWKSEMAARHQRVTEKWLRPVLHRFDRRRKVMRDLV
DQLQFRQLRTRAPIPEKLSEFKNHPSYCLKRDLLKFQAIYPPDAPPLGFFHGGEPIYGRE
CVHTLHSREVWLRHAKTIRLRESPYKVVMSKLRREPTQLELFGHWQTEEYVPPEPRDGKV
PRNAYGNIEIFKECMLPRGAVHLKQPNISRICRRLNVDYAPAVVGFGVHAGGNHPVFEGI
VICREFEQRVLEEYERDLVEQEQRKREKHERRIYDNWRKLIKGLLIRSRLRAKYNFDRL
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggaccccggtaagcgatcactccgcgacaaaatcttcagcagactgcccaagacggca
cgcacggaaccacccgtcgcggttgaggaaacctcgaatccaccactacaacccacccaa
caatcggaacgggaaccggaagttgactcggacggctcgagcagcgtcggtgaccacctg
gtgaacctcgaggacatcgatctggacgcgcagtttttcagccaggagtttcggagtgag
aatgttgcgtcgattgaagagaggataccgccggaagtgctgtcgagtggctcggatggg
gagggtgatgctgaagagagggggcggatttgcgagatgctcacgcagctggcgcagttc
aatagcgatgctgtgcgggaggttgctgagcggaacagggagattgatgccgccgttgat
gtagggatggatgaggaggagattttgaggtcgattcataaggttgagggaattaaaacg
gtagagcagaaggaaggttccgacggggaatgggagctgattaaggctttgaatgttgag
gaagcaaaagggaaggatgtagaagttaccataactcaacggaaaacgggtaaaaatggt
aaaattatagacgtggatgcatgccttaaaagattacttcaaagtgaacgtagagacaaa
ttcttacatacacatcaagtacatttactttgcatgttggggagaggattttacctgaat
aagctagtcaaccaagctgtatcagattgtagccaagaaattgttcaactgcttaacatt
cagcaagacgaggtgcctgctgaaccagatttcaattatctgaagtcagtttgtgatatt
tgccaaaagattagaagagtagacgaattttctaatagttgtagaaaaatgtttagcgca
attctctctccagacgaagcgttcgtactgttgagcatcacaattttgcgattcctagcc
atagaagcacgactagtcatgtacttaaacgtgatatccaaggcgatggtccaagagcct
aaaccgaaacctcaaccgaaagccaaaagcaaaccacccacagaaccgccaactcaacgc
tacactgacgtcgctcttacaacctccgagatcctgaaacgaaagcccgagtttgctcac
ttttcccaagttccacaactcgacggagccgatgacgcgccggtagagccgaaacgacct
cgactgtggaagctgaagcaatctgcacctgcgagagtgtccgtttcaagcggaaagccg
aagcgaggcacgacctccaagttcttcaacaggtcgaaagcgaagctgacgaagaaaccg
gtaaccgatcaacagccaaagttatccctttggatcgaagtgtatctcacggcggagaag
tgctggactcccgtggacatcctgtccaaccaagttggcttggcacacgtgatgaagcga
cttccagatccagcggtttacgtgttcggctggagcaacgacggcacgttgcaggatgtt
agcgggcgttattggtggaaatccgagatggccgctcgacatcaacgcgtcaccgaaaag
tggctgcgtcccgtgcttcaccgcttcgacagaagacgaaaggtcatgcgggatcttgtg
gatcaactgcagtttcgacaactgcgaaccagagcaccgatccccgagaagttgtccgag
ttcaagaaccacccctcgtactgcctgaagcgcgacctgctcaagttccaagccatctac
cccccggacgcacccccgctaggcttcttccacggcggcgaacccatctacggccgcgag
tgcgtccacacgctgcactcgcgcgaggtttggctgcgccacgccaaaaccatccggctg
cgagagtccccctacaaggtggtcatgtccaagctgcgccgcgagcccacccagctcgag
ctgttcggccactggcagacggaggagtacgtgccgccggagccgcgcgacggcaaggtt
ccgcgcaacgcgtacggcaacatcgagatcttcaaggagtgcatgctgccgcgcggggcg
gtccatttgaagcagcccaacatctcgcggatctgtcgccggttgaacgtggattacgcg
cccgccgtggtcgggttcggagttcatgccggtgggaatcaccccgtgtttgaagggatt
gtcatctgtagggagtttgagcagcgtgtgctggaagagtacgagcgtgacctggtggag
caggaacagcgaaagcgggaaaagcacgagcgtcggatctacgacaattggcgcaaactg
atcaaaggactgctgatccgaagcaggttgcgagcgaaatataactttgatcggctttga
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