Culex pipiens pallens (northern house mosquito): 120414546
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Entry
120414546 CDS
T07310
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpii03041
]
120414546
03009 Ribosome biogenesis [BR:
cpii03009
]
120414546
Enzymes [BR:
cpii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120414546
Spliceosome [BR:
cpii03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120414546
Ribosome biogenesis [BR:
cpii03009
]
Eukaryotic type
90S particles
Helicases
120414546
Pre-60S particles
120414546
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
DUF8305
LPD26
Motif
Other DBs
NCBI-GeneID:
120414546
NCBI-ProteinID:
XP_039431693
LinkDB
All DBs
Position
2:25792664..25799178
Genome browser
AA seq
606 aa
AA seq
DB search
MGRKNKQKIKSQLGAEKPASNGKASVEDLEENFELEPEQTKADKRKKQKKRKNSEGENGS
VAGAFVKRPKNSDEEENDDDAEENGHDDSEEQEEHPTVGSGDAYEVLLGSQEFESLKGKV
SDNTLKAITEMGFTKMTEIQAKAIPPLLAGRDLIGSAKTGSGKTLAFLIPAVELIYKLQF
KPRNGTGVLVISPTRELAMQIFGVLKELSAHHHYTYGLLMGGASRHTENEKLSKGLNIIV
ATPGRLLDHLKGTPNFLFKNLQCLIIDECDRILEIGFEEDMKQIISILPKKRQTMLFSAT
QTSRTEELGKLALKSEPIYVGVDDNKTEATVSGLEQGYIVCPSEKRLLVLFTFLKKNRKK
KVMVFFSSCLSVKFHHELFNYIDLPVNSIHGKQKQAKRTSVFFQFCNAESGILLCTDVAA
RGLDIPAVDWIVQYDPPNDTKEYIHRVGRTARGDNLCGHALLLLRPEEVAFLKYLKQAKV
PLNEFEFSWNKIADIQLQLETLLAKNYFLNQSGKLAFKSYVRAYEGHHMKDVFNVGNLDL
LQVARNFGFTQPPHVDFGKSYKIQNSDRRAGNRGLGHFKSLNKDKKGEMKFKHIKNRKEL
KKVDYK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagaataagcagaaaataaagtcgcagctgggcgcggaaaagcccgcttca
aacggcaaagcttccgtggaggatttggaggagaacttcgagcttgagccggaacagacc
aaggcggacaagcggaaaaagcaaaagaaacgtaagaactcggagggcgaaaatggttcc
gttgctggtgcttttgtaaaacgtcccaaaaacagtgacgaagaggagaatgatgatgac
gcggaggaaaacggtcatgatgattcggaggaacaggaggaacacccgaccgttggttcc
ggagatgcgtacgaggtcttgctcggaagccaagagtttgaatcgctcaagggcaaagtt
tccgataatacgctgaaggcaatcaccgagatgggattcaccaagatgacggagatccag
gccaaagcgattccgcctctgctggccggtcgcgatctgattggttcggccaaaacgggc
agcggcaaaacgttagcttttctgattccggccgttgagttgatctacaagttgcagttt
aagccaagaaacggaaccggcgtgcttgtgatttcgccgacgcgcgaactggccatgcag
attttcggcgtgctgaaggaactcagtgcgcaccaccattacacgtacggactgttgatg
ggtggggccagtcggcacacggagaacgagaagctgtcgaaaggactaaacattattgtt
gccacgccgggtcgccttctggaccatctgaaaggaactcccaacttcctgttcaaaaac
cttcaatgtctgatcatcgacgagtgcgatcggatcctggaaatcggtttcgaggaggac
atgaagcagatcattagcattctgccgaaaaagcgtcaaacgatgctgttttccgccacg
caaacctcacgcacggaggaactcggcaagctggcgctcaagtcggaaccgatctacgtc
ggcgtggacgacaacaagacggaggcgacggtgagtgggctcgagcagggctacatcgtg
tgtccgtcggagaagcggctgctggtgttgtttacattcttgaagaaaaatcgcaagaag
aaggtgatggtgttcttttcgtcgtgtctgtcggtcaagttccaccacgagctgttcaat
tatatcgacctgccggtgaactcgattcatggcaagcaaaagcaagccaagcgcacgtcc
gtcttcttccagttctgcaacgccgagtcgggcatcctgctctgcacggacgtggccgcc
cgcggtctggacattccggcggtggactggatcgtgcagtacgaccccccgaacgacacc
aaggagtacatccaccgggtgggacgaaccgctcgcggggacaacctgtgcggccacgcg
ctgctgctgctccgtccggaggaggtggctttcctgaagtatctgaagcaagcgaaggta
ccgctgaacgagtttgagttttcgtggaacaagatcgccgatattcagctgcagctggag
acgctgctggcgaagaattactttttgaaccagtcggggaagttggcgttcaagtcgtac
gtgcgggcgtacgaggggcaccatatgaaggacgtgtttaacgtggggaacttggacctg
ctgcaggtggcgcggaactttggctttacgcagccgccgcacgtggactttggcaagagc
tacaagatccagaactcggaccggcgggcgggcaatcgcgggttgggccacttcaagtcg
ctgaacaaggacaagaagggggagatgaagtttaagcacattaagaataggaaagagctg
aagaaggttgactacaagtga
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