Culex pipiens pallens (northern house mosquito): 120414732
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Entry
120414732 CDS
T07310
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cpii
Culex pipiens pallens (northern house mosquito)
Pathway
cpii04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpii00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120414732
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpii01009
]
120414732
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpii04131
]
120414732
03029 Mitochondrial biogenesis [BR:
cpii03029
]
120414732
Protein phosphatases and associated proteins [BR:
cpii01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120414732
Membrane trafficking [BR:
cpii04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120414732
Mitochondrial biogenesis [BR:
cpii03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120414732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
ubiquitin
KxDL
Motif
Other DBs
NCBI-GeneID:
120414732
NCBI-ProteinID:
XP_039431971
LinkDB
All DBs
Position
2:106415620..106444158
Genome browser
AA seq
1425 aa
AA seq
DB search
MLYVFHVDTGRMLTFEMSKALEIVRSLKETIERHHGIPCASIVLLVSGGEVLQDTQRVCN
YSAGTDTNPIYMFSKSVLDARNQPAPWPSIETDNDLKAQVDKCLELPATYNTVVTRSLLA
QQICEMAKEEAKTCETLIHEQHLQQQGWAAVVANMEDSVMEFQERVADFYRRYEEHRQRF
TEHMEILSAFDHDLKQLSEIPILSTLMENAASRPFGNFDEAYVDAGNTANSTSSGSVKTT
SNSEPATAAIAAAASTTDAEGTTPSQGEEKAVALAGSGSAEQQQTGSSGISDKDKAKCIS
LLDWISASEGQRMLKRMAEECTSGLEQFEKHTVGLKQNIDKAVEASQRGDIKEIKGLEER
LCDLDKVMYEARKIVSDQNELAQSFQQNQNRANTLGDTSILPDLCASHKSQLIVMLQNHK
NLRDIRRRCAKCKEELGNNLFQRLRYIIHVETRVWEIDNSILFYHTSLKRLQKHLGIIEQ
IHMAPCMYVSAVTEVVRRRMFSSSFLRWASDLACRLMTIHNEEVMRRHEFTAQFEGHFLS
TLFPGMDDMPPSYAIQAPSIFDSSLPALNKRDLQELSTFLPELTEKIQLPNIDSVIDFFS
SRSVEGTNQSKSSGLQEYPPDMGAAEPTAIDGKGDADSATTAQQPTKEGCESETDTEEFE
KVGQSPIDRRRRSRSKVPPVDTCSMATSTERVLQASAETLTEENLGTTRLEVEKLKTILR
TVYQLSQSSISFLREQLSAVRTESASNRAEFRSKLEAINRAWAAIQEEARNRERETIQQL
TVDHELEMNDLRKSIHQKDDEMQSLRSDNSMIKASHIETVSKYESEKRELNVTVDEMKEV
VRKLEQRLADVEVDRKKAIQEAVEQLEHKHKTEIESLRCRYKLMTSMDRSPSDTSLEKIE
KPDMIDIASHEQLLAQAREDFNREKERAIKTAIEEERQRWESSTVTIKPQQRSMASSPGT
PTGSHDIYKRILEEKERQLDELRDKESVLIRENQRYKETIQSLTDPELGSNQLNLKEQLE
ALEREKQQLSRELERHQNRPSGGVSIQSCSKGDLVMIVYNSTYDQYTIVQNAPVLYFLHA
DSYAAFGLTELVAGQVPRIIHCMGTVVDKDYCHARKDGNRYKVSRGTRFYRVKVKPVPGG
SGGSSGGGSSASLSASVSSGTSRSAAADSDKHSHKKEKSKMSRSSSTITEQGLAAAINSV
VTSTTTTTGTSPGLLIDSFAQTEQLGSPLGQMEDSAIKTSASRDMIDSGVAEQNLQNQQQ
QQQRISTYKERNISVTDDEDVGYGGGAGSASASVDESDSQQQQTRLRYESVCEEEQPEAE
EEQEDVVDQQQQPAPEGGNTTAPNTRLSPLPELTGDTVDAPSLSVFLSTSTGSSIAEELV
ATSTSGAGSLQQLTTLADDVSDSADSEYRSLETKDDDDDEDYCLE
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacgtgttccacgtcgataccggccggatgctgaccttcgagatgagcaaggcg
ctggagattgtccgctcgctgaaggagaccatcgagcggcaccacggcatcccctgtgcc
agcatcgtgctgctggtcagcggcggtgaggtgctgcaggacacgcaacgggtgtgcaac
tactcggccggcaccgacaccaacccgatctacatgttcagcaagagcgtgctggacgcg
cggaaccagccggcgccgtggccgagcatagaaactgacaacgacctgaaggcccaggtg
gacaagtgcctcgagctgccagccacgtacaacacggtcgtgacgcgctcgctgctcgcc
cagcagatctgcgagatggccaaggaggaggccaaaacgtgcgagacgctcatccacgag
cagcacctgcagcagcagggctgggccgccgtcgtcgccaacatggaggactcggtaatg
gagttccaggagcgcgtggcggacttttaccggcgctacgaggagcaccggcagcgcttc
accgagcacatggagatcttgtcggcgttcgatcacgacttgaagcagctgtcggagatt
ccgatcctgtccacgctcatggagaatgccgcttcgcgtccgttcggaaactttgacgag
gcgtacgtggatgcgggcaacacggctaacagcacctcatccggtagcgtcaaaacgact
agcaatagtgagccggcaacggctgccatcgctgctgcggcttcaacaaccgacgcagaa
ggaacgaccccttcccagggagaggagaaggctgtagctctggcaggttccggtagcgcc
gagcagcaacagaccggcagcagcggcatatccgacaaggacaaagccaagtgcatctcg
ctgctggactggatctccgcatcggagggacagcgaatgctgaagcgtatggccgaggag
tgcaccagcgggctggagcagttcgagaagcacaccgtagggctcaagcagaacatcgac
aaagccgtcgaggcgtcgcagaggggtgacattaaggagatcaaaggcctggaggagcga
ctgtgcgatctggacaaggtgatgtacgaggcgcgcaagatcgtcagcgatcaaaacgag
ctggcgcagtcgttccagcagaaccagaaccgggcgaacacgctcggtgatacgtcgatc
ctgcccgatctgtgcgcctcgcacaaaagccagctcatcgtgatgctgcagaaccacaag
aatctgcgcgacattcggcgtcgctgtgccaagtgcaaggaggagctgggcaacaacctg
ttccagcggttacggtacatcatccacgtggagactcgggtgtgggagatcgacaacagc
attctgttctaccacacctccctgaagcggctccagaagcacctgggcatcatcgagcag
atccatatggcgccctgcatgtacgtgagtgccgtcacggaagtggttcgccggaggatg
ttctccagttcgtttctcagatgggcttccgatctggcgtgccgcctgatgacgatccac
aacgaggaggtgatgcgccggcacgagtttaccgcccagttcgaggggcactttctcagt
acgctgttccccgggatggacgacatgccgccgtcgtacgcgattcaggcgccgtcaatc
ttcgattctagtctaccggcgctgaacaagcgagatctccaggaactgtcgaccttcctg
ccggagctcacggagaagatccagctaccgaacatagattctgtgatagatttcttttca
tctagatcggtagagggcaccaaccagagcaagagcagcggtctgcaggagtatccgccg
gacatgggagcagcggaacccactgccatcgacggaaagggcgatgcggactccgccacc
accgcacaacaaccaacgaaagagggctgcgaatccgaaaccgacacggaagagtttgaa
aaagtgggacaaagtccaatcgaccgtcgtcgccggtcccgctcgaaggtgccgccggtg
gacacctgcagcatggccacgtccacggaacgggtgctgcaggcgagcgcagaaacactg
acagaggagaacctcggcaccacccggctcgaggtggagaagctgaaaaccatcctccgg
accgtgtaccagctgtcccagtcgtcgatctcatttctgcgcgagcagctgtcggccgta
cggaccgagagtgcctcgaaccgggccgagttccgcagcaagctggaagccatcaatcgg
gcgtgggctgccatccaggaggaggcccgcaaccgcgagcgggagaccatccagcagctc
acggtggaccacgagctggagatgaatgatctgcgcaaaagcatccaccagaaggacgac
gagatgcagtcgctgcggtcggacaactcgatgatcaaggcgagccacatcgagacggtg
tccaagtacgagagcgaaaagcgcgagctgaacgtaacggtcgacgagatgaaggaggtg
gtgaggaaactggagcagcgacttgccgacgtcgaggtggaccgcaagaaagcgatccag
gaagcggtggaacagctcgagcacaagcacaaaaccgagatcgaatcgctgcgctgcagg
tacaagctgatgaccagcatggaccgatcgccgtccgacaccagcctggagaagatcgaa
aagccggacatgatcgacattgcgagccacgagcagctgctggcgcaggcccgggaagat
ttcaaccgcgagaaggaacgtgcaatcaaaaccgcaatcgaagaggaacgacaacgatgg
gagtcgtccacggtgacgatcaagccgcagcagcgatcgatggccagctcgccgggaact
ccgacgggcagccacgacatctacaagcggatcctggaggagaaggagcgccagctggac
gagctgcgggacaaggaatcggttctgataagggagaaccagcgatacaaggaaaccatc
caatcgctgaccgatccggagctcggctcgaaccagctgaacctgaaggaacagctggaa
gcgctggaacgcgaaaagcaacagctaagcagggagctcgaacggcaccagaacagaccc
agtggcggggtgtccatccagtcgtgctccaagggcgacctcgtgatgattgtttacaac
agcacgtacgatcagtacacgatcgtgcagaacgcccccgtgctgtacttcctgcacgcg
gacagctacgcggcgttcgggctgacggagctggtggcgggccaggtgccgcggatcatc
cactgcatgggcacggtcgtggacaaggattactgccacgcgcgcaaggacggcaaccgg
tacaaggtgtcgcgcggtacccggttctaccgggtcaaggtgaaaccggtgcccggtggt
agtggtggcagcagcgggggaggaagcagcgcgagcctcagtgccagcgttagcagcggc
acgtcgaggagcgccgccgccgactcggacaagcactcgcacaagaaggagaagagcaaa
atgagtcgctcgtcgtcaaccatcacggagcagggcttggcggccgccatcaacagcgtc
gtgacgagcacgaccaccacgacgggaacgtcgccggggctgctgatcgattcgttcgca
caaaccgaacagctgggctctcccttggggcagatggaggactcggccatcaagaccagc
gccagccgggacatgatcgactcgggcgtggctgagcagaacctgcagaaccagcagcag
caacagcaacggatcagcacctacaaggagcgcaacatctcggtgacggacgacgaggac
gttgggtacgggggcggtgccggcagtgccagtgccagtgtagacgagagtgactcccag
cagcagcagacgaggctgcgatacgagagcgtttgcgaggaggaacaaccggaagcggag
gaggagcaggaggatgtcgtggaccagcagcagcagccggctccggaaggcggcaacacg
acggccccgaacacccgtctgtcaccgttaccggaacttacgggagacaccgtcgacgcc
ccttcgttgtcggtatttcttagcaccagcaccggaagtagcatagcggaagagctggtg
gctaccagcacctcgggcgcgggctctctccaacagttgacgaccctggcggacgacgtg
agcgattcggccgattccgagtaccggtcgctggagaccaaggacgacgacgacgacgaa
gattactgcctcgaatga
DBGET
integrated database retrieval system
